RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 ITSN2Q9NZM3 1697 aa25.65■■□□□ 1.7
FAM3A-222ENST00000621967 MYOM3Q5VTT5 1437 aa25.64■■□□□ 1.69
FAM3A-222ENST00000621967 CDC42BPAQ5VT25 1732 aa25.63■■□□□ 1.69
FAM3A-222ENST00000621967 CENPBP07199 599 aaPredicted RBP25.63■■□□□ 1.69
FAM3A-222ENST00000621967 GPATCH8Q9UKJ3 1502 aaKnown RBP25.63■■□□□ 1.69
FAM3A-222ENST00000621967 KIF13AQ9H1H9 1805 aa25.63■■□□□ 1.69
FAM3A-222ENST00000621967 PREX2Q70Z35 1606 aa25.62■■□□□ 1.69
FAM3A-222ENST00000621967 CD109Q6YHK3 1445 aa25.61■■□□□ 1.69
FAM3A-222ENST00000621967 MAP3K4Q9Y6R4 1608 aa25.6■■□□□ 1.69
FAM3A-222ENST00000621967 TRHP20396 242 aaPredicted RBP25.58■■□□□ 1.69
FAM3A-222ENST00000621967 CFDP1Q9UEE9 299 aaPredicted RBP25.58■■□□□ 1.69
FAM3A-222ENST00000621967 ARHGAP5Q13017 1502 aa25.58■■□□□ 1.69
FAM3A-222ENST00000621967 PLCH2O75038 1416 aa25.58■■□□□ 1.69
FAM3A-222ENST00000621967 CDC42BPBQ9Y5S2 1711 aa25.56■■□□□ 1.68
FAM3A-222ENST00000621967 FGD6Q6ZV73 1430 aa25.56■■□□□ 1.68
FAM3A-222ENST00000621967 ARAP3Q8WWN8 1544 aa25.55■■□□□ 1.68
FAM3A-222ENST00000621967 MIA2Q96PC5 1412 aa25.55■■□□□ 1.68
FAM3A-222ENST00000621967 ZNF777Q9ULD5 760 aaPredicted RBP25.51■■□□□ 1.67
FAM3A-222ENST00000621967 TSPOAP1O95153 1857 aa25.51■■□□□ 1.67
FAM3A-222ENST00000621967 PTPN23Q9H3S7 1636 aa25.5■■□□□ 1.67
FAM3A-222ENST00000621967 FANCAO15360 1455 aa25.5■■□□□ 1.67
FAM3A-222ENST00000621967 EFCAB2Q5VUJ9 269 aa25.5■■□□□ 1.67
FAM3A-222ENST00000621967 CFAP74Q9C0B2 1584 aa25.48■■□□□ 1.67
FAM3A-222ENST00000621967 CAMSAP2Q08AD1 1489 aa25.46■■□□□ 1.67
FAM3A-222ENST00000621967 TEX14Q8IWB6 1497 aa25.46■■□□□ 1.67
FAM3A-222ENST00000621967 FAM50AQ14320 339 aaKnown RBP25.46■■□□□ 1.67
FAM3A-222ENST00000621967 SAMD9LQ8IVG5 1584 aa25.45■■□□□ 1.66
FAM3A-222ENST00000621967 PPRC1Q5VV67 1664 aaKnown RBP25.45■■□□□ 1.66
FAM3A-222ENST00000621967 MIER1Q8N108 512 aa25.44■■□□□ 1.66
FAM3A-222ENST00000621967 TCOF1Q13428 1488 aaKnown RBP25.44■■□□□ 1.66
FAM3A-222ENST00000621967 ZNF644Q9H582 1327 aaPredicted RBP25.44■■□□□ 1.66
FAM3A-222ENST00000621967 NEO1Q92859 1461 aa25.42■■□□□ 1.66
FAM3A-222ENST00000621967 RAB3GAP2Q9H2M9 1393 aa25.41■■□□□ 1.66
FAM3A-222ENST00000621967 PLEKHH2Q8IVE3 1493 aa25.4■■□□□ 1.66
FAM3A-222ENST00000621967 AKNAQ7Z591 1439 aa25.4■■□□□ 1.66
FAM3A-222ENST00000621967 ADGRL1O94910 1474 aa25.39■■□□□ 1.65
FAM3A-222ENST00000621967 ABCC1P33527 1531 aa25.38■■□□□ 1.65
FAM3A-222ENST00000621967 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.38■■□□□ 1.65
FAM3A-222ENST00000621967 SYCP2Q9BX26 1530 aa25.37■■□□□ 1.65
FAM3A-222ENST00000621967 GTF3C3Q9Y5Q9 886 aa25.37■■□□□ 1.65
FAM3A-222ENST00000621967 SETD5Q9C0A6 1442 aa25.36■■□□□ 1.65
FAM3A-222ENST00000621967 KIAA1107Q9UPP5 1409 aa25.35■■□□□ 1.65
FAM3A-222ENST00000621967 PELP1Q8IZL8 1130 aaKnown RBP25.33■■□□□ 1.65
FAM3A-222ENST00000621967 SCAPERQ9BY12 1400 aa25.33■■□□□ 1.65
FAM3A-222ENST00000621967 ITGAEP38570 1179 aa25.33■■□□□ 1.65
FAM3A-222ENST00000621967 HNRNPMP52272 730 aaKnown RBP eCLIP25.33■■□□□ 1.65
FAM3A-222ENST00000621967 ARHGEF12Q9NZN5 1544 aa25.31■■□□□ 1.64
FAM3A-222ENST00000621967 ARHGEF5Q12774 1597 aa25.3■■□□□ 1.64
FAM3A-222ENST00000621967 MBD5Q9P267 1494 aa25.3■■□□□ 1.64
FAM3A-222ENST00000621967 DNMT1P26358 1616 aaKnown RBP25.3■■□□□ 1.64
FAM3A-222ENST00000621967 CCDC141Q6ZP82 1450 aa25.28■■□□□ 1.64
FAM3A-222ENST00000621967 DAPK1P53355 1430 aa25.28■■□□□ 1.64
FAM3A-222ENST00000621967 RSPH4AQ5TD94 716 aa25.27■■□□□ 1.64
FAM3A-222ENST00000621967 DENND4BO75064 1496 aaPredicted RBP25.27■■□□□ 1.64
FAM3A-222ENST00000621967 TRAPPC8Q9Y2L5 1435 aa25.26■■□□□ 1.63
FAM3A-222ENST00000621967 ABCC5O15440 1437 aa25.25■■□□□ 1.63
FAM3A-222ENST00000621967 POGZQ7Z3K3 1410 aa25.25■■□□□ 1.63
FAM3A-222ENST00000621967 ZNF518AQ6AHZ1 1483 aa25.24■■□□□ 1.63
FAM3A-222ENST00000621967 CROCC2H7BZ55 1655 aa25.23■■□□□ 1.63
FAM3A-222ENST00000621967 TSPY4P0CV99 314 aa25.22■■□□□ 1.63
FAM3A-222ENST00000621967 TSPY10P0CW01 314 aa25.22■■□□□ 1.63
FAM3A-222ENST00000621967 YTHDC1Q96MU7 727 aaKnown RBP25.22■■□□□ 1.63
FAM3A-222ENST00000621967 AFAP1Q8N556 730 aa25.21■■□□□ 1.63
FAM3A-222ENST00000621967 SHANK2Q9UPX8 1470 aa25.2■■□□□ 1.62
FAM3A-222ENST00000621967 RAPGEF3O95398 923 aa25.2■■□□□ 1.62
FAM3A-222ENST00000621967 RICTORQ6R327 1708 aa25.19■■□□□ 1.62
FAM3A-222ENST00000621967 PTPRKQ15262 1439 aa25.18■■□□□ 1.62
FAM3A-222ENST00000621967 C9orf84Q5VXU9 1444 aa25.18■■□□□ 1.62
FAM3A-222ENST00000621967 CHIC2Q9UKJ5 165 aa25.17■■□□□ 1.62
FAM3A-222ENST00000621967 KDM5CP41229 1560 aa25.17■■□□□ 1.62
FAM3A-222ENST00000621967 KDM6BO15054 1643 aa25.16■■□□□ 1.62
FAM3A-222ENST00000621967 SPAG9O60271 1321 aaKnown RBP25.16■■□□□ 1.62
FAM3A-222ENST00000621967 FRMPD1Q5SYB0 1578 aa25.16■■□□□ 1.62
FAM3A-222ENST00000621967 COL17A1Q9UMD9 1497 aaPredicted RBP25.16■■□□□ 1.62
FAM3A-222ENST00000621967 MYT1LQ9UL68 1186 aa25.15■■□□□ 1.62
FAM3A-222ENST00000621967 MAST1Q9Y2H9 1570 aa25.14■■□□□ 1.62
FAM3A-222ENST00000621967 ADGBQ8N7X0 1667 aa25.14■■□□□ 1.61
FAM3A-222ENST00000621967 HECW2Q9P2P5 1572 aa25.12■■□□□ 1.61
FAM3A-222ENST00000621967 ZFYVE16Q7Z3T8 1539 aa25.12■■□□□ 1.61
FAM3A-222ENST00000621967 ATP7AQ04656 1500 aa25.11■■□□□ 1.61
FAM3A-222ENST00000621967 INO80Q9ULG1 1556 aaPredicted RBP25.11■■□□□ 1.61
FAM3A-222ENST00000621967 ZMYM4Q5VZL5 1548 aa25.1■■□□□ 1.61
FAM3A-222ENST00000621967 RTEL1-TNFRSF6BF6WH68 1400 aa25.1■■□□□ 1.61
FAM3A-222ENST00000621967 ANKRD30AQ9BXX3 1397 aa25.09■■□□□ 1.61
FAM3A-222ENST00000621967 ADGRL2O95490 1459 aa25.09■■□□□ 1.61
FAM3A-222ENST00000621967 MLH3Q9UHC1 1453 aa25.09■■□□□ 1.61
FAM3A-222ENST00000621967 ROCK1Q13464 1354 aa25.08■■□□□ 1.61
FAM3A-222ENST00000621967 KIDINS220Q9ULH0 1771 aa25.06■■□□□ 1.6
FAM3A-222ENST00000621967 NCOA1Q15788 1441 aa25.06■■□□□ 1.6
FAM3A-222ENST00000621967 PLXNC1O60486 1568 aa25.06■■□□□ 1.6
FAM3A-222ENST00000621967 RRP7BPQ9NSQ0 103 aa25.06■■□□□ 1.6
FAM3A-222ENST00000621967 TIMELESSQ9UNS1 1208 aa25.05■■□□□ 1.6
FAM3A-222ENST00000621967 MAGI2Q86UL8 1455 aa25.04■■□□□ 1.6
FAM3A-222ENST00000621967 KIF15Q9NS87 1388 aa25.03■■□□□ 1.6
FAM3A-222ENST00000621967 HFM1A2PYH4 1435 aa25.02■■□□□ 1.6
FAM3A-222ENST00000621967 ABCA6Q8N139 1617 aa25■■□□□ 1.59
FAM3A-222ENST00000621967 GCC2Q8IWJ2 1684 aa24.99■■□□□ 1.59
FAM3A-222ENST00000621967 YEATS2Q9ULM3 1422 aa24.99■■□□□ 1.59
FAM3A-222ENST00000621967 NAIPQ13075 1403 aa24.98■■□□□ 1.59
FAM3A-222ENST00000621967 DIP2CQ9Y2E4 1556 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms