RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 CDC42BPBQ9Y5S2 1711 aa16.19■□□□□ 0.18
CPNE3-212ENST00000621783 CAMSAP2Q08AD1 1489 aa16.18■□□□□ 0.18
CPNE3-212ENST00000621783 KCNH8Q96L42 1107 aa16.17■□□□□ 0.18
CPNE3-212ENST00000621783 ARHGAP5Q13017 1502 aa16.15■□□□□ 0.18
CPNE3-212ENST00000621783 SAMD9LQ8IVG5 1584 aa16.15■□□□□ 0.18
CPNE3-212ENST00000621783 CFDP1Q9UEE9 299 aaPredicted RBP16.15■□□□□ 0.18
CPNE3-212ENST00000621783 DNMT1P26358 1616 aaKnown RBP16.15■□□□□ 0.18
CPNE3-212ENST00000621783 ARAP3Q8WWN8 1544 aa16.14■□□□□ 0.18
CPNE3-212ENST00000621783 PLCH2O75038 1416 aa16.12■□□□□ 0.17
CPNE3-212ENST00000621783 ITGAEP38570 1179 aa16.12■□□□□ 0.17
CPNE3-212ENST00000621783 ZNF644Q9H582 1327 aaPredicted RBP16.12■□□□□ 0.17
CPNE3-212ENST00000621783 CROCC2H7BZ55 1655 aa16.11■□□□□ 0.17
CPNE3-212ENST00000621783 DIP2BQ9P265 1576 aa16.1■□□□□ 0.17
CPNE3-212ENST00000621783 DAPK1P53355 1430 aa16.1■□□□□ 0.17
CPNE3-212ENST00000621783 PTPRKQ15262 1439 aa16.1■□□□□ 0.17
CPNE3-212ENST00000621783 GLI2P10070 1586 aa16.09■□□□□ 0.17
CPNE3-212ENST00000621783 ARHGEF5Q12774 1597 aa16.09■□□□□ 0.17
CPNE3-212ENST00000621783 ZNF777Q9ULD5 760 aaPredicted RBP16.08■□□□□ 0.16
CPNE3-212ENST00000621783 ABCC5O15440 1437 aa16.08■□□□□ 0.16
CPNE3-212ENST00000621783 ABCC1P33527 1531 aa16.08■□□□□ 0.16
CPNE3-212ENST00000621783 SYCP2Q9BX26 1530 aa16.08■□□□□ 0.16
CPNE3-212ENST00000621783 MAP3K4Q9Y6R4 1608 aa16.08■□□□□ 0.16
CPNE3-212ENST00000621783 PLEKHH2Q8IVE3 1493 aa16.06■□□□□ 0.16
CPNE3-212ENST00000621783 ADGBQ8N7X0 1667 aa16.05■□□□□ 0.16
CPNE3-212ENST00000621783 CFAP74Q9C0B2 1584 aa16.05■□□□□ 0.16
CPNE3-212ENST00000621783 FANCAO15360 1455 aa16.04■□□□□ 0.16
CPNE3-212ENST00000621783 MBD5Q9P267 1494 aa16.04■□□□□ 0.16
CPNE3-212ENST00000621783 SHANK2Q9UPX8 1470 aa16.04■□□□□ 0.16
CPNE3-212ENST00000621783 DNAJC5Q9H3Z4 198 aa16.04■□□□□ 0.16
CPNE3-212ENST00000621783 GCC2Q8IWJ2 1684 aa16.04■□□□□ 0.16
CPNE3-212ENST00000621783 CD109Q6YHK3 1445 aa16.03■□□□□ 0.16
CPNE3-212ENST00000621783 EFCAB2Q5VUJ9 269 aa16.03■□□□□ 0.16
CPNE3-212ENST00000621783 CCDC141Q6ZP82 1450 aa16.03■□□□□ 0.16
CPNE3-212ENST00000621783 AKNAQ7Z591 1439 aa16.02■□□□□ 0.16
CPNE3-212ENST00000621783 KIAA1107Q9UPP5 1409 aa16.02■□□□□ 0.16
CPNE3-212ENST00000621783 ARHGEF12Q9NZN5 1544 aa16.02■□□□□ 0.15
CPNE3-212ENST00000621783 HFM1A2PYH4 1435 aa16.01■□□□□ 0.15
CPNE3-212ENST00000621783 ADGRL2O95490 1459 aa16■□□□□ 0.15
CPNE3-212ENST00000621783 KIF13AQ9H1H9 1805 aa16■□□□□ 0.15
CPNE3-212ENST00000621783 MAST1Q9Y2H9 1570 aa16■□□□□ 0.15
CPNE3-212ENST00000621783 SETD5Q9C0A6 1442 aa15.99■□□□□ 0.15
CPNE3-212ENST00000621783 ROCK1Q13464 1354 aa15.99■□□□□ 0.15
CPNE3-212ENST00000621783 ADGRL1O94910 1474 aa15.98■□□□□ 0.15
CPNE3-212ENST00000621783 HNRNPMP52272 730 aaKnown RBP eCLIP15.98■□□□□ 0.15
CPNE3-212ENST00000621783 NAIPQ13075 1403 aa15.98■□□□□ 0.15
CPNE3-212ENST00000621783 C9orf84Q5VXU9 1444 aa15.98■□□□□ 0.15
CPNE3-212ENST00000621783 PPRC1Q5VV67 1664 aaKnown RBP15.97■□□□□ 0.15
CPNE3-212ENST00000621783 RAB3GAP2Q9H2M9 1393 aa15.97■□□□□ 0.15
CPNE3-212ENST00000621783 CHIC2Q9UKJ5 165 aa15.96■□□□□ 0.15
CPNE3-212ENST00000621783 NEO1Q92859 1461 aa15.96■□□□□ 0.14
CPNE3-212ENST00000621783 TRAPPC8Q9Y2L5 1435 aa15.95■□□□□ 0.14
CPNE3-212ENST00000621783 FAM69CQ0P6D2 419 aa15.95■□□□□ 0.14
CPNE3-212ENST00000621783 PLXNC1O60486 1568 aa15.93■□□□□ 0.14
CPNE3-212ENST00000621783 RSPH4AQ5TD94 716 aa15.93■□□□□ 0.14
CPNE3-212ENST00000621783 KDM6BO15054 1643 aa15.93■□□□□ 0.14
CPNE3-212ENST00000621783 NCOA1Q15788 1441 aa15.93■□□□□ 0.14
CPNE3-212ENST00000621783 SCAPERQ9BY12 1400 aa15.93■□□□□ 0.14
CPNE3-212ENST00000621783 RRP7BPQ9NSQ0 103 aa15.92■□□□□ 0.14
CPNE3-212ENST00000621783 TSPOAP1O95153 1857 aa15.92■□□□□ 0.14
CPNE3-212ENST00000621783 ZFYVE16Q7Z3T8 1539 aa15.92■□□□□ 0.14
CPNE3-212ENST00000621783 INO80Q9ULG1 1556 aaPredicted RBP15.92■□□□□ 0.14
CPNE3-212ENST00000621783 ANKRD30AQ9BXX3 1397 aa15.91■□□□□ 0.14
CPNE3-212ENST00000621783 POGZQ7Z3K3 1410 aa15.9■□□□□ 0.14
CPNE3-212ENST00000621783 TEX14Q8IWB6 1497 aa15.9■□□□□ 0.14
CPNE3-212ENST00000621783 KDM5CP41229 1560 aa15.89■□□□□ 0.13
CPNE3-212ENST00000621783 TSPY4P0CV99 314 aa15.89■□□□□ 0.13
CPNE3-212ENST00000621783 TSPY10P0CW01 314 aa15.89■□□□□ 0.13
CPNE3-212ENST00000621783 ZNF518AQ6AHZ1 1483 aa15.89■□□□□ 0.13
CPNE3-212ENST00000621783 ATP7AQ04656 1500 aa15.88■□□□□ 0.13
CPNE3-212ENST00000621783 KIF15Q9NS87 1388 aa15.87■□□□□ 0.13
CPNE3-212ENST00000621783 RTEL1-TNFRSF6BF6WH68 1400 aa15.86■□□□□ 0.13
CPNE3-212ENST00000621783 DENND4BO75064 1496 aaPredicted RBP15.86■□□□□ 0.13
CPNE3-212ENST00000621783 RICTORQ6R327 1708 aa15.86■□□□□ 0.13
CPNE3-212ENST00000621783 FRMPD1Q5SYB0 1578 aa15.86■□□□□ 0.13
CPNE3-212ENST00000621783 HECW2Q9P2P5 1572 aa15.86■□□□□ 0.13
CPNE3-212ENST00000621783 DHX57Q6P158 1386 aaKnown RBP15.86■□□□□ 0.13
CPNE3-212ENST00000621783 HRCP23327 699 aa15.85■□□□□ 0.13
CPNE3-212ENST00000621783 AFAP1Q8N556 730 aa15.84■□□□□ 0.13
CPNE3-212ENST00000621783 CCER1Q8TC90 406 aaPredicted RBP15.84■□□□□ 0.13
CPNE3-212ENST00000621783 SPAG9O60271 1321 aaKnown RBP15.84■□□□□ 0.13
CPNE3-212ENST00000621783 KIDINS220Q9ULH0 1771 aa15.84■□□□□ 0.13
CPNE3-212ENST00000621783 ANKRD50Q9ULJ7 1429 aa15.84■□□□□ 0.13
CPNE3-212ENST00000621783 DUOX2Q9NRD8 1548 aa15.84■□□□□ 0.13
CPNE3-212ENST00000621783 ZMYM4Q5VZL5 1548 aa15.81■□□□□ 0.12
CPNE3-212ENST00000621783 MLH3Q9UHC1 1453 aa15.8■□□□□ 0.12
CPNE3-212ENST00000621783 ABCA6Q8N139 1617 aa15.79■□□□□ 0.12
CPNE3-212ENST00000621783 ERBINQ96RT1 1412 aa15.79■□□□□ 0.12
CPNE3-212ENST00000621783 UNC13BO14795 1591 aa15.79■□□□□ 0.12
CPNE3-212ENST00000621783 DIP2CQ9Y2E4 1556 aa15.76■□□□□ 0.11
CPNE3-212ENST00000621783 RAPGEF3O95398 923 aa15.76■□□□□ 0.11
CPNE3-212ENST00000621783 KDM5DQ9BY66 1539 aa15.76■□□□□ 0.11
CPNE3-212ENST00000621783 EIF2AK4Q9P2K8 1649 aaKnown RBP15.76■□□□□ 0.11
CPNE3-212ENST00000621783 ACIN1Q9UKV3 1341 aaKnown RBP15.75■□□□□ 0.11
CPNE3-212ENST00000621783 PZPP20742 1482 aa15.73■□□□□ 0.11
CPNE3-212ENST00000621783 MAGI2Q86UL8 1455 aa15.73■□□□□ 0.11
CPNE3-212ENST00000621783 TRHP20396 242 aaPredicted RBP15.73■□□□□ 0.11
CPNE3-212ENST00000621783 TRIM52Q96A61 297 aa15.73■□□□□ 0.11
CPNE3-212ENST00000621783 MYT1LQ9UL68 1186 aa15.73■□□□□ 0.11
CPNE3-212ENST00000621783 DEPDC5O75140 1603 aa15.72■□□□□ 0.11
CPNE3-212ENST00000621783 A2MP01023 1474 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms