RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 YEATS2Q9ULM3 1422 aa32.95■■■□□ 2.87
SMC6-210ENST00000621152 MAGI2Q86UL8 1455 aa32.94■■■□□ 2.86
SMC6-210ENST00000621152 LOC105371045A0A1W2PR82 267 aa32.94■■■□□ 2.86
SMC6-210ENST00000621152 AFAP1Q8N556 730 aa32.94■■■□□ 2.86
SMC6-210ENST00000621152 ZMYM4Q5VZL5 1548 aa32.93■■■□□ 2.86
SMC6-210ENST00000621152 ARHGEF40Q8TER5 1519 aa32.92■■■□□ 2.86
SMC6-210ENST00000621152 ZFYVE16Q7Z3T8 1539 aa32.91■■■□□ 2.86
SMC6-210ENST00000621152 MYT1LQ9UL68 1186 aa32.9■■■□□ 2.86
SMC6-210ENST00000621152 ADAMTSL3P82987 1691 aa32.89■■■□□ 2.86
SMC6-210ENST00000621152 CEP162Q5TB80 1403 aa32.88■■■□□ 2.85
SMC6-210ENST00000621152 PTPRMP28827 1452 aa32.86■■■□□ 2.85
SMC6-210ENST00000621152 BCORL1Q5H9F3 1711 aa32.85■■■□□ 2.85
SMC6-210ENST00000621152 MLECQ14165 292 aa32.85■■■□□ 2.85
SMC6-210ENST00000621152 ZNF777Q9ULD5 760 aaPredicted RBP32.84■■■□□ 2.85
SMC6-210ENST00000621152 CDC42BPBQ9Y5S2 1711 aa32.82■■■□□ 2.85
SMC6-210ENST00000621152 ATP10AO60312 1499 aa32.81■■■□□ 2.84
SMC6-210ENST00000621152 ZNF518AQ6AHZ1 1483 aa32.81■■■□□ 2.84
SMC6-210ENST00000621152 MTUS2Q5JR59 1369 aa32.79■■■□□ 2.84
SMC6-210ENST00000621152 HECW2Q9P2P5 1572 aa32.79■■■□□ 2.84
SMC6-210ENST00000621152 PREX2Q70Z35 1606 aa32.77■■■□□ 2.84
SMC6-210ENST00000621152 MADDQ8WXG6 1647 aa32.76■■■□□ 2.83
SMC6-210ENST00000621152 PLPPR3Q6T4P5 718 aa32.75■■■□□ 2.83
SMC6-210ENST00000621152 TRAPPC8Q9Y2L5 1435 aa32.75■■■□□ 2.83
SMC6-210ENST00000621152 ARHGEF12Q9NZN5 1544 aa32.74■■■□□ 2.83
SMC6-210ENST00000621152 GPATCH8Q9UKJ3 1502 aaKnown RBP32.74■■■□□ 2.83
SMC6-210ENST00000621152 CFDP1Q9UEE9 299 aaPredicted RBP32.74■■■□□ 2.83
SMC6-210ENST00000621152 C9orf84Q5VXU9 1444 aa32.73■■■□□ 2.83
SMC6-210ENST00000621152 CCNB3Q8WWL7 1395 aa32.71■■■□□ 2.83
SMC6-210ENST00000621152 CDC42BPAQ5VT25 1732 aa32.71■■■□□ 2.83
SMC6-210ENST00000621152 SIGLEC1Q9BZZ2 1709 aa32.71■■■□□ 2.83
SMC6-210ENST00000621152 HNRNPMP52272 730 aaKnown RBP eCLIP32.7■■■□□ 2.83
SMC6-210ENST00000621152 KDM5CP41229 1560 aa32.7■■■□□ 2.82
SMC6-210ENST00000621152 ABCC1P33527 1531 aa32.68■■■□□ 2.82
SMC6-210ENST00000621152 MLH3Q9UHC1 1453 aa32.67■■■□□ 2.82
SMC6-210ENST00000621152 RIMS1Q86UR5 1692 aaKnown RBP32.65■■■□□ 2.82
SMC6-210ENST00000621152 ITSN2Q9NZM3 1697 aa32.59■■■□□ 2.81
SMC6-210ENST00000621152 SAMD9LQ8IVG5 1584 aa32.58■■■□□ 2.81
SMC6-210ENST00000621152 SPAG9O60271 1321 aaKnown RBP32.58■■■□□ 2.81
SMC6-210ENST00000621152 DIP2CQ9Y2E4 1556 aa32.57■■■□□ 2.8
SMC6-210ENST00000621152 KIAA1107Q9UPP5 1409 aa32.56■■■□□ 2.8
SMC6-210ENST00000621152 ZNF644Q9H582 1327 aaPredicted RBP32.55■■■□□ 2.8
SMC6-210ENST00000621152 EHBP1L1Q8N3D4 1523 aa32.55■■■□□ 2.8
SMC6-210ENST00000621152 PLEKHH2Q8IVE3 1493 aa32.54■■■□□ 2.8
SMC6-210ENST00000621152 SYCP2Q9BX26 1530 aa32.53■■■□□ 2.8
SMC6-210ENST00000621152 CEBPAP49715 358 aaPredicted RBP32.53■■■□□ 2.8
SMC6-210ENST00000621152 VPS8Q8N3P4 1428 aa32.51■■■□□ 2.8
SMC6-210ENST00000621152 ABCA6Q8N139 1617 aa32.51■■■□□ 2.8
SMC6-210ENST00000621152 ESF1Q9H501 851 aaKnown RBP32.49■■■□□ 2.79
SMC6-210ENST00000621152 FER1L4A9Z1Z3 1794 aa32.49■■■□□ 2.79
SMC6-210ENST00000621152 KIDINS220Q9ULH0 1771 aa32.49■■■□□ 2.79
SMC6-210ENST00000621152 REREQ9P2R6 1566 aa32.49■■■□□ 2.79
SMC6-210ENST00000621152 TIAM1Q13009 1591 aa32.46■■■□□ 2.79
SMC6-210ENST00000621152 HSPA2P54652 639 aa32.46■■■□□ 2.79
SMC6-210ENST00000621152 LMTK3Q96Q04 1460 aa32.45■■■□□ 2.79
SMC6-210ENST00000621152 AGLP35573 1532 aa32.44■■■□□ 2.78
SMC6-210ENST00000621152 NCOA2Q15596 1464 aa32.43■■■□□ 2.78
SMC6-210ENST00000621152 KANK4Q5T7N3 995 aaPredicted RBP32.39■■■□□ 2.78
SMC6-210ENST00000621152 MBD5Q9P267 1494 aa32.37■■■□□ 2.77
SMC6-210ENST00000621152 SUPT6HQ7KZ85 1726 aaKnown RBP32.37■■■□□ 2.77
SMC6-210ENST00000621152 ATP7AQ04656 1500 aa32.36■■■□□ 2.77
SMC6-210ENST00000621152 LRRC9Q6ZRR7 1453 aa32.35■■■□□ 2.77
SMC6-210ENST00000621152 RSPH4AQ5TD94 716 aa32.34■■■□□ 2.77
SMC6-210ENST00000621152 ILDR1Q86SU0 546 aaPredicted RBP32.34■■■□□ 2.77
SMC6-210ENST00000621152 A2MP01023 1474 aa32.31■■■□□ 2.76
SMC6-210ENST00000621152 APLP2Q06481 763 aa32.31■■■□□ 2.76
SMC6-210ENST00000621152 GGT6Q6P531 493 aa32.29■■■□□ 2.76
SMC6-210ENST00000621152 INO80Q9ULG1 1556 aaPredicted RBP32.28■■■□□ 2.76
SMC6-210ENST00000621152 MAP3K1Q13233 1512 aa32.27■■■□□ 2.76
SMC6-210ENST00000621152 RTEL1-TNFRSF6BF6WH68 1400 aa32.26■■■□□ 2.76
SMC6-210ENST00000621152 CNTLNQ9NXG0 1405 aa32.26■■■□□ 2.75
SMC6-210ENST00000621152 CAMSAP2Q08AD1 1489 aa32.25■■■□□ 2.75
SMC6-210ENST00000621152 TSPY4P0CV99 314 aa32.24■■■□□ 2.75
SMC6-210ENST00000621152 TSPY10P0CW01 314 aa32.24■■■□□ 2.75
SMC6-210ENST00000621152 ZMYM3Q14202 1370 aa32.21■■■□□ 2.75
SMC6-210ENST00000621152 CCDC141Q6ZP82 1450 aa32.21■■■□□ 2.75
SMC6-210ENST00000621152 DHX29Q7Z478 1369 aaKnown RBP32.19■■■□□ 2.74
SMC6-210ENST00000621152 UHRF1BP1Q6BDS2 1440 aa32.19■■■□□ 2.74
SMC6-210ENST00000621152 C3P01024 1663 aa32.18■■■□□ 2.74
SMC6-210ENST00000621152 PPP6R1Q9UPN7 881 aa32.18■■■□□ 2.74
SMC6-210ENST00000621152 SETD1BQ9UPS6 1966 aaKnown RBP32.18■■■□□ 2.74
SMC6-210ENST00000621152 PLXNC1O60486 1568 aa32.17■■■□□ 2.74
SMC6-210ENST00000621152 PREX1Q8TCU6 1659 aa32.16■■■□□ 2.74
SMC6-210ENST00000621152 KIF3BO15066 747 aa32.15■■■□□ 2.74
SMC6-210ENST00000621152 ADGBQ8N7X0 1667 aa32.15■■■□□ 2.74
SMC6-210ENST00000621152 MYOM3Q5VTT5 1437 aa32.11■■■□□ 2.73
SMC6-210ENST00000621152 MIA2Q96PC5 1412 aa32.09■■■□□ 2.73
SMC6-210ENST00000621152 ARHGEF5Q12774 1597 aa32.09■■■□□ 2.73
SMC6-210ENST00000621152 DMRT2Q9Y5R5 561 aa32.07■■■□□ 2.72
SMC6-210ENST00000621152 NPATQ14207 1427 aa32.05■■■□□ 2.72
SMC6-210ENST00000621152 MROH2AA6NES4 1674 aa32.04■■■□□ 2.72
SMC6-210ENST00000621152 CLTCQ00610 1675 aaKnown RBP32.04■■■□□ 2.72
SMC6-210ENST00000621152 FBXO41Q8TF61 875 aa32.02■■■□□ 2.72
SMC6-210ENST00000621152 WASHC2CQ9Y4E1 1318 aa32■■■□□ 2.71
SMC6-210ENST00000621152 PTPRKQ15262 1439 aa31.98■■■□□ 2.71
SMC6-210ENST00000621152 STRCQ7RTU9 1775 aa31.93■■■□□ 2.7
SMC6-210ENST00000621152 FBXO31Q5XUX0 539 aaPredicted RBP31.92■■■□□ 2.7
SMC6-210ENST00000621152 CERKQ8TCT0 537 aa31.92■■■□□ 2.7
SMC6-210ENST00000621152 MAST1Q9Y2H9 1570 aa31.91■■■□□ 2.7
SMC6-210ENST00000621152 ABCC5O15440 1437 aa31.88■■■□□ 2.69
SMC6-210ENST00000621152 RRP7BPQ9NSQ0 103 aa31.87■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms