RNA–Protein interactions for RNA: ENST00000621104.4

CCDC144B-209, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 2

Gene CCDC144B, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-209ENST00000621104 C3orf67Q6ZVT6 689 aa10.31□□□□□ -0.76
CCDC144B-209ENST00000621104 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.29□□□□□ -0.76
CCDC144B-209ENST00000621104 PPP1R37O75864 691 aa10.28□□□□□ -0.76
CCDC144B-209ENST00000621104 SPRYD3Q8NCJ5 442 aa10.26□□□□□ -0.77
CCDC144B-209ENST00000621104 ST18O60284 1047 aa10.23□□□□□ -0.77
CCDC144B-209ENST00000621104 SLAIN1Q8ND83 568 aa10.21□□□□□ -0.77
CCDC144B-209ENST00000621104 PAXIP1Q6ZW49 1069 aaPredicted RBP10.2□□□□□ -0.78
CCDC144B-209ENST00000621104 CFAP44Q96MT7 982 aa10.17□□□□□ -0.78
CCDC144B-209ENST00000621104 TMEM92Q6UXU6 159 aa10.16□□□□□ -0.78
CCDC144B-209ENST00000621104 KIF3CO14782 793 aa10.15□□□□□ -0.78
CCDC144B-209ENST00000621104 PLCB2Q00722 1185 aa10.12□□□□□ -0.79
CCDC144B-209ENST00000621104 TMC2Q8TDI7 906 aa10.12□□□□□ -0.79
CCDC144B-209ENST00000621104 C2orf72A6NCS6 295 aa10.11□□□□□ -0.79
CCDC144B-209ENST00000621104 SNPHO15079 494 aa10.11□□□□□ -0.79
CCDC144B-209ENST00000621104 CRISPLD2Q9H0B8 497 aa10.11□□□□□ -0.79
CCDC144B-209ENST00000621104 GPHNQ9NQX3 736 aaPredicted RBP10.1□□□□□ -0.79
CCDC144B-209ENST00000621104 NCKAP5LQ9HCH0 1330 aa10.07□□□□□ -0.8
CCDC144B-209ENST00000621104 PDE4AP27815 886 aa10.07□□□□□ -0.8
CCDC144B-209ENST00000621104 FOXK1P85037 733 aa10.07□□□□□ -0.8
CCDC144B-209ENST00000621104 CADPS2Q86UW7 1296 aa10.06□□□□□ -0.8
CCDC144B-209ENST00000621104 MFSD10Q14728 455 aa10.04□□□□□ -0.8
CCDC144B-209ENST00000621104 DOK7Q18PE1 504 aa10.04□□□□□ -0.8
CCDC144B-209ENST00000621104 HOXB3P14651 431 aaPredicted RBP10.02□□□□□ -0.81
CCDC144B-209ENST00000621104 DSG2Q14126 1118 aa10.01□□□□□ -0.81
CCDC144B-209ENST00000621104 DDX27Q96GQ7 796 aaKnown RBP10.01□□□□□ -0.81
CCDC144B-209ENST00000621104 RIMBP2O15034 1052 aa10□□□□□ -0.81
CCDC144B-209ENST00000621104 SLC34A2O95436 690 aa10□□□□□ -0.81
CCDC144B-209ENST00000621104 PPP1R15BQ5SWA1 713 aa10□□□□□ -0.81
CCDC144B-209ENST00000621104 ZSWIM6Q9HCJ5 1215 aa10□□□□□ -0.81
CCDC144B-209ENST00000621104 PLPP6Q8IY26 295 aa9.99□□□□□ -0.81
CCDC144B-209ENST00000621104 LARP6Q9BRS8 491 aaKnown RBP9.99□□□□□ -0.81
CCDC144B-209ENST00000621104 TSHZ2Q9NRE2 1034 aa9.98□□□□□ -0.81
CCDC144B-209ENST00000621104 ZNF710Q8N1W2 664 aa9.95□□□□□ -0.82
CCDC144B-209ENST00000621104 PTCD2Q8WV60 388 aaKnown RBP9.93□□□□□ -0.82
CCDC144B-209ENST00000621104 MARVELD3Q96A59 401 aa9.93□□□□□ -0.82
CCDC144B-209ENST00000621104 HOXB1P14653 301 aaPredicted RBP9.92□□□□□ -0.82
CCDC144B-209ENST00000621104 CAMK2BQ13554 666 aa9.92□□□□□ -0.82
CCDC144B-209ENST00000621104 HAP1P54257 671 aaPredicted RBP9.91□□□□□ -0.82
CCDC144B-209ENST00000621104 GPR153Q6NV75 609 aa9.91□□□□□ -0.82
CCDC144B-209ENST00000621104 KRTAP3-3Q9BYR6 98 aa9.91□□□□□ -0.82
CCDC144B-209ENST00000621104 KRTAP3-2Q9BYR7 98 aa9.91□□□□□ -0.82
CCDC144B-209ENST00000621104 WDR70Q9NW82 654 aa9.9□□□□□ -0.82
CCDC144B-209ENST00000621104 OXER1Q8TDS5 423 aa9.89□□□□□ -0.83
CCDC144B-209ENST00000621104 PCDHGA4Q9Y5G9 962 aa9.89□□□□□ -0.83
CCDC144B-209ENST00000621104 TBC1D12O60347 775 aa9.87□□□□□ -0.83
CCDC144B-209ENST00000621104 E2F4Q16254 413 aa9.85□□□□□ -0.83
CCDC144B-209ENST00000621104 EMILIN3Q9NT22 766 aa9.85□□□□□ -0.83
CCDC144B-209ENST00000621104 ARSIQ5FYB1 569 aa9.84□□□□□ -0.83
CCDC144B-209ENST00000621104 ARIH1Q9Y4X5 557 aaPredicted RBP9.84□□□□□ -0.83
CCDC144B-209ENST00000621104 EMP3P54852 163 aa9.83□□□□□ -0.84
CCDC144B-209ENST00000621104 VSIG10Q8N0Z9 540 aa9.83□□□□□ -0.84
CCDC144B-209ENST00000621104 KDM4FA0A1W2PPD8 638 aa9.82□□□□□ -0.84
CCDC144B-209ENST00000621104 UPF1Q92900 1129 aaKnown RBP eCLIP9.82□□□□□ -0.84
CCDC144B-209ENST00000621104 ZNF316A6NFI3 1004 aaPredicted RBP9.8□□□□□ -0.84
CCDC144B-209ENST00000621104 NUDT7P0C024 238 aa9.8□□□□□ -0.84
CCDC144B-209ENST00000621104 P3H3Q8IVL6 736 aa9.8□□□□□ -0.84
CCDC144B-209ENST00000621104 POTEB3A0JP26 581 aa9.79□□□□□ -0.84
CCDC144B-209ENST00000621104 MAP3K9P80192 1104 aa9.79□□□□□ -0.84
CCDC144B-209ENST00000621104 POTEBQ6S5H4 581 aa9.79□□□□□ -0.84
CCDC144B-209ENST00000621104 KHSRPQ92945 711 aaKnown RBP eCLIP9.79□□□□□ -0.84
CCDC144B-209ENST00000621104 PSDA5PKW4 1024 aaPredicted RBP9.77□□□□□ -0.85
CCDC144B-209ENST00000621104 ANO8Q9HCE9 1232 aaPredicted RBP9.76□□□□□ -0.85
CCDC144B-209ENST00000621104 KDM2AQ9Y2K7 1162 aa9.76□□□□□ -0.85
CCDC144B-209ENST00000621104 ERBB3P21860 1342 aa9.76□□□□□ -0.85
CCDC144B-209ENST00000621104 DPYSL4O14531 572 aa9.75□□□□□ -0.85
CCDC144B-209ENST00000621104 EVI5O60447 810 aa9.75□□□□□ -0.85
CCDC144B-209ENST00000621104 KCNV2Q8TDN2 545 aa9.75□□□□□ -0.85
CCDC144B-209ENST00000621104 FAM205CA6NFA0 338 aa9.74□□□□□ -0.85
CCDC144B-209ENST00000621104 SPDYE16A6NNV3 312 aaPredicted RBP9.74□□□□□ -0.85
CCDC144B-209ENST00000621104 PDIA6Q15084 440 aa9.74□□□□□ -0.85
CCDC144B-209ENST00000621104 ARHGEF1Q92888 912 aaKnown RBP9.74□□□□□ -0.85
CCDC144B-209ENST00000621104 HS3ST6Q96QI5 342 aa9.74□□□□□ -0.85
CCDC144B-209ENST00000621104 LHX6Q9UPM6 363 aa9.74□□□□□ -0.85
CCDC144B-209ENST00000621104 VARS2Q5ST30 1063 aaKnown RBP9.72□□□□□ -0.85
CCDC144B-209ENST00000621104 PTGER2P43116 358 aa9.69□□□□□ -0.86
CCDC144B-209ENST00000621104 JPH4Q96JJ6 628 aa9.69□□□□□ -0.86
CCDC144B-209ENST00000621104 ZNF687Q8N1G0 1237 aa9.68□□□□□ -0.86
CCDC144B-209ENST00000621104 FOSBP53539 338 aa9.67□□□□□ -0.86
CCDC144B-209ENST00000621104 PPP4R3BQ5MIZ7 849 aa9.67□□□□□ -0.86
CCDC144B-209ENST00000621104 RNF166Q96A37 237 aaPredicted RBP9.67□□□□□ -0.86
CCDC144B-209ENST00000621104 PHF14O94880 888 aa9.65□□□□□ -0.86
CCDC144B-209ENST00000621104 PBX2P40425 430 aa9.65□□□□□ -0.86
CCDC144B-209ENST00000621104 SLC24A1O60721 1099 aa9.64□□□□□ -0.87
CCDC144B-209ENST00000621104 ZNF454Q8N9F8 522 aa9.64□□□□□ -0.87
CCDC144B-209ENST00000621104 EPAS1Q99814 870 aa9.63□□□□□ -0.87
CCDC144B-209ENST00000621104 FBXW7Q969H0 707 aa9.62□□□□□ -0.87
CCDC144B-209ENST00000621104 ZDHHC16Q969W1 377 aa9.61□□□□□ -0.87
CCDC144B-209ENST00000621104 BCL2L12Q9HB09 334 aa9.61□□□□□ -0.87
CCDC144B-209ENST00000621104 PCDHGA10Q9Y5H3 936 aa9.61□□□□□ -0.87
CCDC144B-209ENST00000621104 TYW1BQ6NUM6 668 aa9.6□□□□□ -0.87
CCDC144B-209ENST00000621104 ARHGAP33O14559 1287 aa9.57□□□□□ -0.88
CCDC144B-209ENST00000621104 DDX12PQ92771 950 aa9.57□□□□□ -0.88
CCDC144B-209ENST00000621104 KCNH8Q96L42 1107 aa9.57□□□□□ -0.88
CCDC144B-209ENST00000621104 POTEEQ6S8J3 1075 aa9.56□□□□□ -0.88
CCDC144B-209ENST00000621104 ADAM33Q9BZ11 813 aa9.56□□□□□ -0.88
CCDC144B-209ENST00000621104 EN1Q05925 392 aaPredicted RBP9.55□□□□□ -0.88
CCDC144B-209ENST00000621104 NBR1Q14596 966 aa9.55□□□□□ -0.88
CCDC144B-209ENST00000621104 PTPREP23469 700 aa9.54□□□□□ -0.88
CCDC144B-209ENST00000621104 GRXCR2A6NFK2 248 aa9.53□□□□□ -0.88
CCDC144B-209ENST00000621104 LSM11P83369 360 aaKnown RBP eCLIP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms