RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 AKNAQ7Z591 1439 aa17.09■□□□□ 0.33
TARDBP-223ENST00000620632 ARHGAP5Q13017 1502 aa17.09■□□□□ 0.33
TARDBP-223ENST00000620632 RICTORQ6R327 1708 aa17.09■□□□□ 0.33
TARDBP-223ENST00000620632 GPATCH8Q9UKJ3 1502 aaKnown RBP17.08■□□□□ 0.32
TARDBP-223ENST00000620632 PHLDB1Q86UU1 1377 aa17.06■□□□□ 0.32
TARDBP-223ENST00000620632 NCOA2Q15596 1464 aa17.05■□□□□ 0.32
TARDBP-223ENST00000620632 ITSN2Q9NZM3 1697 aa17.04■□□□□ 0.32
TARDBP-223ENST00000620632 SAMD9LQ8IVG5 1584 aa17.04■□□□□ 0.32
TARDBP-223ENST00000620632 ADGRL1O94910 1474 aa17.04■□□□□ 0.32
TARDBP-223ENST00000620632 RAPGEF3O95398 923 aa17.03■□□□□ 0.32
TARDBP-223ENST00000620632 ABCC1P33527 1531 aa17.02■□□□□ 0.32
TARDBP-223ENST00000620632 CCNB3Q8WWL7 1395 aa17.02■□□□□ 0.31
TARDBP-223ENST00000620632 ARHGEF12Q9NZN5 1544 aa17.01■□□□□ 0.31
TARDBP-223ENST00000620632 DENND4BO75064 1496 aaPredicted RBP17.01■□□□□ 0.31
TARDBP-223ENST00000620632 EFCAB2Q5VUJ9 269 aa17.01■□□□□ 0.31
TARDBP-223ENST00000620632 SCAPERQ9BY12 1400 aa17.01■□□□□ 0.31
TARDBP-223ENST00000620632 POGZQ7Z3K3 1410 aa16.99■□□□□ 0.31
TARDBP-223ENST00000620632 ZMYM4Q5VZL5 1548 aa16.98■□□□□ 0.31
TARDBP-223ENST00000620632 SYCP2Q9BX26 1530 aa16.96■□□□□ 0.31
TARDBP-223ENST00000620632 KDM5CP41229 1560 aa16.96■□□□□ 0.31
TARDBP-223ENST00000620632 APLP2Q06481 763 aa16.95■□□□□ 0.3
TARDBP-223ENST00000620632 CFDP1Q9UEE9 299 aaPredicted RBP16.95■□□□□ 0.3
TARDBP-223ENST00000620632 TRAPPC8Q9Y2L5 1435 aa16.95■□□□□ 0.3
TARDBP-223ENST00000620632 ZNF777Q9ULD5 760 aaPredicted RBP16.94■□□□□ 0.3
TARDBP-223ENST00000620632 ARHGEF40Q8TER5 1519 aa16.94■□□□□ 0.3
TARDBP-223ENST00000620632 ZNF644Q9H582 1327 aaPredicted RBP16.94■□□□□ 0.3
TARDBP-223ENST00000620632 SIGLEC1Q9BZZ2 1709 aa16.93■□□□□ 0.3
TARDBP-223ENST00000620632 ZNF518AQ6AHZ1 1483 aa16.93■□□□□ 0.3
TARDBP-223ENST00000620632 YEATS2Q9ULM3 1422 aa16.92■□□□□ 0.3
TARDBP-223ENST00000620632 AFAP1Q8N556 730 aa16.91■□□□□ 0.3
TARDBP-223ENST00000620632 CAMSAP2Q08AD1 1489 aa16.91■□□□□ 0.3
TARDBP-223ENST00000620632 HECW2Q9P2P5 1572 aa16.9■□□□□ 0.3
TARDBP-223ENST00000620632 MYOM3Q5VTT5 1437 aa16.9■□□□□ 0.3
TARDBP-223ENST00000620632 KIAA1107Q9UPP5 1409 aa16.9■□□□□ 0.3
TARDBP-223ENST00000620632 ZFYVE16Q7Z3T8 1539 aa16.9■□□□□ 0.3
TARDBP-223ENST00000620632 KIDINS220Q9ULH0 1771 aa16.89■□□□□ 0.3
TARDBP-223ENST00000620632 MBD5Q9P267 1494 aa16.89■□□□□ 0.29
TARDBP-223ENST00000620632 HNRNPMP52272 730 aaKnown RBP eCLIP16.89■□□□□ 0.29
TARDBP-223ENST00000620632 PLEKHH2Q8IVE3 1493 aa16.88■□□□□ 0.29
TARDBP-223ENST00000620632 ABCA6Q8N139 1617 aa16.88■□□□□ 0.29
TARDBP-223ENST00000620632 MAGI2Q86UL8 1455 aa16.87■□□□□ 0.29
TARDBP-223ENST00000620632 DIP2CQ9Y2E4 1556 aa16.86■□□□□ 0.29
TARDBP-223ENST00000620632 MIA2Q96PC5 1412 aa16.86■□□□□ 0.29
TARDBP-223ENST00000620632 MLH3Q9UHC1 1453 aa16.86■□□□□ 0.29
TARDBP-223ENST00000620632 INO80Q9ULG1 1556 aaPredicted RBP16.85■□□□□ 0.29
TARDBP-223ENST00000620632 PTPN23Q9H3S7 1636 aa16.85■□□□□ 0.29
TARDBP-223ENST00000620632 PPARGC1BQ86YN6 1023 aaKnown RBP16.85■□□□□ 0.29
TARDBP-223ENST00000620632 ARHGEF5Q12774 1597 aa16.83■□□□□ 0.28
TARDBP-223ENST00000620632 FGD6Q6ZV73 1430 aa16.83■□□□□ 0.28
TARDBP-223ENST00000620632 ATP7AQ04656 1500 aa16.81■□□□□ 0.28
TARDBP-223ENST00000620632 KDM4FA0A1W2PPD8 638 aa16.81■□□□□ 0.28
TARDBP-223ENST00000620632 TCOF1Q13428 1488 aaKnown RBP16.8■□□□□ 0.28
TARDBP-223ENST00000620632 CCDC141Q6ZP82 1450 aa16.8■□□□□ 0.28
TARDBP-223ENST00000620632 BCORL1Q5H9F3 1711 aa16.8■□□□□ 0.28
TARDBP-223ENST00000620632 ATP10AO60312 1499 aa16.8■□□□□ 0.28
TARDBP-223ENST00000620632 C9orf84Q5VXU9 1444 aa16.79■□□□□ 0.28
TARDBP-223ENST00000620632 CROCC2H7BZ55 1655 aa16.78■□□□□ 0.28
TARDBP-223ENST00000620632 ADGBQ8N7X0 1667 aa16.78■□□□□ 0.28
TARDBP-223ENST00000620632 REREQ9P2R6 1566 aa16.78■□□□□ 0.28
TARDBP-223ENST00000620632 SPAG9O60271 1321 aaKnown RBP16.77■□□□□ 0.28
TARDBP-223ENST00000620632 ADAMTSL3P82987 1691 aa16.77■□□□□ 0.28
TARDBP-223ENST00000620632 MYT1LQ9UL68 1186 aa16.76■□□□□ 0.27
TARDBP-223ENST00000620632 DNMT1P26358 1616 aaKnown RBP16.76■□□□□ 0.27
TARDBP-223ENST00000620632 MAST1Q9Y2H9 1570 aa16.75■□□□□ 0.27
TARDBP-223ENST00000620632 PLXNC1O60486 1568 aa16.74■□□□□ 0.27
TARDBP-223ENST00000620632 RTEL1-TNFRSF6BF6WH68 1400 aa16.73■□□□□ 0.27
TARDBP-223ENST00000620632 ABCC5O15440 1437 aa16.73■□□□□ 0.27
TARDBP-223ENST00000620632 MADDQ8WXG6 1647 aa16.73■□□□□ 0.27
TARDBP-223ENST00000620632 DAPK1P53355 1430 aa16.71■□□□□ 0.27
TARDBP-223ENST00000620632 RSPH4AQ5TD94 716 aa16.71■□□□□ 0.27
TARDBP-223ENST00000620632 ARID4BQ4LE39 1312 aaPredicted RBP16.7■□□□□ 0.26
TARDBP-223ENST00000620632 AGLP35573 1532 aa16.7■□□□□ 0.26
TARDBP-223ENST00000620632 FER1L4A9Z1Z3 1794 aa16.69■□□□□ 0.26
TARDBP-223ENST00000620632 A2MP01023 1474 aa16.69■□□□□ 0.26
TARDBP-223ENST00000620632 RIMS1Q86UR5 1692 aaKnown RBP16.69■□□□□ 0.26
TARDBP-223ENST00000620632 SHANK2Q9UPX8 1470 aa16.68■□□□□ 0.26
TARDBP-223ENST00000620632 TSPY4P0CV99 314 aa16.66■□□□□ 0.26
TARDBP-223ENST00000620632 TSPY10P0CW01 314 aa16.66■□□□□ 0.26
TARDBP-223ENST00000620632 MLECQ14165 292 aa16.66■□□□□ 0.26
TARDBP-223ENST00000620632 FAM50AQ14320 339 aaKnown RBP16.66■□□□□ 0.26
TARDBP-223ENST00000620632 RRBP1Q9P2E9 1410 aaKnown RBP16.65■□□□□ 0.26
TARDBP-223ENST00000620632 PTPRKQ15262 1439 aa16.64■□□□□ 0.25
TARDBP-223ENST00000620632 DHX29Q7Z478 1369 aaKnown RBP16.63■□□□□ 0.25
TARDBP-223ENST00000620632 PTPRMP28827 1452 aa16.61■□□□□ 0.25
TARDBP-223ENST00000620632 ADGRL2O95490 1459 aa16.61■□□□□ 0.25
TARDBP-223ENST00000620632 CHIC2Q9UKJ5 165 aa16.6■□□□□ 0.25
TARDBP-223ENST00000620632 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.6■□□□□ 0.25
TARDBP-223ENST00000620632 KIF15Q9NS87 1388 aa16.59■□□□□ 0.25
TARDBP-223ENST00000620632 DUOX2Q9NRD8 1548 aa16.59■□□□□ 0.25
TARDBP-223ENST00000620632 EIF2AK4Q9P2K8 1649 aaKnown RBP16.59■□□□□ 0.25
TARDBP-223ENST00000620632 AEBP2Q6ZN18 517 aaPredicted RBP16.58■□□□□ 0.24
TARDBP-223ENST00000620632 NCOA1Q15788 1441 aa16.58■□□□□ 0.24
TARDBP-223ENST00000620632 CLTCQ00610 1675 aaKnown RBP16.58■□□□□ 0.24
TARDBP-223ENST00000620632 MROH1Q8NDA8 1641 aa16.57■□□□□ 0.24
TARDBP-223ENST00000620632 RNF17Q9BXT8 1623 aaKnown RBP16.57■□□□□ 0.24
TARDBP-223ENST00000620632 RRP7BPQ9NSQ0 103 aa16.57■□□□□ 0.24
TARDBP-223ENST00000620632 C3P01024 1663 aa16.56■□□□□ 0.24
TARDBP-223ENST00000620632 ANKRD30AQ9BXX3 1397 aa16.55■□□□□ 0.24
TARDBP-223ENST00000620632 KIF3BO15066 747 aa16.55■□□□□ 0.24
TARDBP-223ENST00000620632 MROH2AA6NES4 1674 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms