RNA–Protein interactions for RNA: ENST00000619923.1

SLC46A1-209, Transcript of solute carrier family 46 member 1, humanhuman

Gene SLC46A1, Length 528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-209ENST00000619923 MAGI2Q86UL8 1455 aa13.38□□□□□ -0.27
SLC46A1-209ENST00000619923 DIP2CQ9Y2E4 1556 aa13.37□□□□□ -0.27
SLC46A1-209ENST00000619923 PREX2Q70Z35 1606 aa13.36□□□□□ -0.27
SLC46A1-209ENST00000619923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.36□□□□□ -0.27
SLC46A1-209ENST00000619923 HNRNPUL2Q1KMD3 747 aaKnown RBP13.36□□□□□ -0.27
SLC46A1-209ENST00000619923 FBXO41Q8TF61 875 aa13.36□□□□□ -0.27
SLC46A1-209ENST00000619923 ITSN2Q9NZM3 1697 aa13.36□□□□□ -0.27
SLC46A1-209ENST00000619923 PLCH2O75038 1416 aa13.36□□□□□ -0.27
SLC46A1-209ENST00000619923 CDC42BPAQ5VT25 1732 aa13.35□□□□□ -0.27
SLC46A1-209ENST00000619923 C3P01024 1663 aa13.34□□□□□ -0.27
SLC46A1-209ENST00000619923 ARID4BQ4LE39 1312 aaPredicted RBP13.34□□□□□ -0.27
SLC46A1-209ENST00000619923 REREQ9P2R6 1566 aa13.33□□□□□ -0.28
SLC46A1-209ENST00000619923 SCAPERQ9BY12 1400 aa13.33□□□□□ -0.28
SLC46A1-209ENST00000619923 PLEKHD1A6NEE1 506 aa13.32□□□□□ -0.28
SLC46A1-209ENST00000619923 HSPA2P54652 639 aa13.32□□□□□ -0.28
SLC46A1-209ENST00000619923 FAM9AQ8IZU1 332 aaPredicted RBP13.32□□□□□ -0.28
SLC46A1-209ENST00000619923 C9orf84Q5VXU9 1444 aa13.31□□□□□ -0.28
SLC46A1-209ENST00000619923 KIDINS220Q9ULH0 1771 aa13.31□□□□□ -0.28
SLC46A1-209ENST00000619923 ABCC1P33527 1531 aa13.31□□□□□ -0.28
SLC46A1-209ENST00000619923 ATP10AO60312 1499 aa13.3□□□□□ -0.28
SLC46A1-209ENST00000619923 TROQ12816 1431 aaPredicted RBP13.29□□□□□ -0.28
SLC46A1-209ENST00000619923 FMN1Q68DA7 1419 aa13.29□□□□□ -0.28
SLC46A1-209ENST00000619923 ZNF518AQ6AHZ1 1483 aa13.29□□□□□ -0.28
SLC46A1-209ENST00000619923 ARHGAP5Q13017 1502 aa13.29□□□□□ -0.28
SLC46A1-209ENST00000619923 SETD1BQ9UPS6 1966 aaKnown RBP13.28□□□□□ -0.28
SLC46A1-209ENST00000619923 SAMD9LQ8IVG5 1584 aa13.24□□□□□ -0.29
SLC46A1-209ENST00000619923 MLECQ14165 292 aa13.24□□□□□ -0.29
SLC46A1-209ENST00000619923 PLPPR3Q6T4P5 718 aa13.24□□□□□ -0.29
SLC46A1-209ENST00000619923 MROH2AA6NES4 1674 aa13.23□□□□□ -0.29
SLC46A1-209ENST00000619923 AGLP35573 1532 aa13.23□□□□□ -0.29
SLC46A1-209ENST00000619923 MLH3Q9UHC1 1453 aa13.23□□□□□ -0.29
SLC46A1-209ENST00000619923 TRAPPC8Q9Y2L5 1435 aa13.22□□□□□ -0.29
SLC46A1-209ENST00000619923 EHMT2Q96KQ7 1210 aa13.21□□□□□ -0.29
SLC46A1-209ENST00000619923 INO80Q9ULG1 1556 aaPredicted RBP13.2□□□□□ -0.3
SLC46A1-209ENST00000619923 SUPT6HQ7KZ85 1726 aaKnown RBP13.2□□□□□ -0.3
SLC46A1-209ENST00000619923 PLXNC1O60486 1568 aa13.2□□□□□ -0.3
SLC46A1-209ENST00000619923 ZNF142P52746 1687 aaPredicted RBP13.19□□□□□ -0.3
SLC46A1-209ENST00000619923 CEBPAP49715 358 aaPredicted RBP13.19□□□□□ -0.3
SLC46A1-209ENST00000619923 CASKIN1Q8WXD9 1431 aa13.19□□□□□ -0.3
SLC46A1-209ENST00000619923 SYCP2Q9BX26 1530 aa13.18□□□□□ -0.3
SLC46A1-209ENST00000619923 CCDC18Q5T9S5 1454 aa13.18□□□□□ -0.3
SLC46A1-209ENST00000619923 LTBP4Q8N2S1 1624 aa13.18□□□□□ -0.3
SLC46A1-209ENST00000619923 AFAP1Q8N556 730 aa13.18□□□□□ -0.3
SLC46A1-209ENST00000619923 CLIP1P30622 1438 aa13.18□□□□□ -0.3
SLC46A1-209ENST00000619923 CLTCQ00610 1675 aaKnown RBP13.18□□□□□ -0.3
SLC46A1-209ENST00000619923 MYO3AQ8NEV4 1616 aa13.17□□□□□ -0.3
SLC46A1-209ENST00000619923 EFCAB2Q5VUJ9 269 aa13.17□□□□□ -0.3
SLC46A1-209ENST00000619923 FYCO1Q9BQS8 1478 aa13.16□□□□□ -0.3
SLC46A1-209ENST00000619923 UHRF1BP1Q6BDS2 1440 aa13.16□□□□□ -0.3
SLC46A1-209ENST00000619923 CERKQ8TCT0 537 aa13.16□□□□□ -0.3
SLC46A1-209ENST00000619923 UBTFP17480 764 aaKnown RBP13.14□□□□□ -0.31
SLC46A1-209ENST00000619923 ADGBQ8N7X0 1667 aa13.13□□□□□ -0.31
SLC46A1-209ENST00000619923 CHIC1Q5VXU3 224 aa13.13□□□□□ -0.31
SLC46A1-209ENST00000619923 ATP7AQ04656 1500 aa13.13□□□□□ -0.31
SLC46A1-209ENST00000619923 NCOA1Q15788 1441 aa13.13□□□□□ -0.31
SLC46A1-209ENST00000619923 ATP1B4Q9UN42 357 aaPredicted RBP13.12□□□□□ -0.31
SLC46A1-209ENST00000619923 GPATCH8Q9UKJ3 1502 aaKnown RBP13.12□□□□□ -0.31
SLC46A1-209ENST00000619923 CAMSAP1Q5T5Y3 1602 aa13.11□□□□□ -0.31
SLC46A1-209ENST00000619923 PTPRTO14522 1441 aa13.11□□□□□ -0.31
SLC46A1-209ENST00000619923 TIAM1Q13009 1591 aa13.11□□□□□ -0.31
SLC46A1-209ENST00000619923 SPATA31D1Q6ZQQ2 1576 aa13.11□□□□□ -0.31
SLC46A1-209ENST00000619923 CDK11AQ9UQ88 783 aaPredicted RBP13.09□□□□□ -0.31
SLC46A1-209ENST00000619923 CEP170BQ9Y4F5 1589 aaPredicted RBP13.07□□□□□ -0.32
SLC46A1-209ENST00000619923 POLR1AO95602 1720 aaPredicted RBP13.07□□□□□ -0.32
SLC46A1-209ENST00000619923 CNTLNQ9NXG0 1405 aa13.06□□□□□ -0.32
SLC46A1-209ENST00000619923 NPATQ14207 1427 aa13.05□□□□□ -0.32
SLC46A1-209ENST00000619923 IQSEC2Q5JU85 1478 aa13.05□□□□□ -0.32
SLC46A1-209ENST00000619923 NEURL4Q96JN8 1562 aa13.03□□□□□ -0.32
SLC46A1-209ENST00000619923 ILDR2Q71H61 639 aa13.03□□□□□ -0.32
SLC46A1-209ENST00000619923 PTPRKQ15262 1439 aa13.03□□□□□ -0.32
SLC46A1-209ENST00000619923 A2MP01023 1474 aa13.03□□□□□ -0.32
SLC46A1-209ENST00000619923 TCOF1Q13428 1488 aaKnown RBP13.03□□□□□ -0.32
SLC46A1-209ENST00000619923 KIAA1107Q9UPP5 1409 aa13.02□□□□□ -0.33
SLC46A1-209ENST00000619923 EHBP1L1Q8N3D4 1523 aa13.02□□□□□ -0.33
SLC46A1-209ENST00000619923 DNMT1P26358 1616 aaKnown RBP13.02□□□□□ -0.33
SLC46A1-209ENST00000619923 PLA2R1Q13018 1463 aa13.01□□□□□ -0.33
SLC46A1-209ENST00000619923 MBD5Q9P267 1494 aa13.01□□□□□ -0.33
SLC46A1-209ENST00000619923 PLEKHH2Q8IVE3 1493 aa12.99□□□□□ -0.33
SLC46A1-209ENST00000619923 ZMYM3Q14202 1370 aa12.99□□□□□ -0.33
SLC46A1-209ENST00000619923 HNRNPMP52272 730 aaKnown RBP eCLIP12.98□□□□□ -0.33
SLC46A1-209ENST00000619923 MYT1LQ9UL68 1186 aa12.98□□□□□ -0.33
SLC46A1-209ENST00000619923 DISP3Q9P2K9 1392 aa12.97□□□□□ -0.33
SLC46A1-209ENST00000619923 SPAG9O60271 1321 aaKnown RBP12.97□□□□□ -0.33
SLC46A1-209ENST00000619923 DMRT2Q9Y5R5 561 aa12.97□□□□□ -0.33
SLC46A1-209ENST00000619923 STRCP1A6NGW2 1772 aa12.97□□□□□ -0.33
SLC46A1-209ENST00000619923 ALKQ9UM73 1620 aa12.96□□□□□ -0.33
SLC46A1-209ENST00000619923 ZNF777Q9ULD5 760 aaPredicted RBP12.96□□□□□ -0.33
SLC46A1-209ENST00000619923 ZNF335Q9H4Z2 1342 aaPredicted RBP12.95□□□□□ -0.34
SLC46A1-209ENST00000619923 CCNB3Q8WWL7 1395 aa12.94□□□□□ -0.34
SLC46A1-209ENST00000619923 ZNF644Q9H582 1327 aaPredicted RBP12.94□□□□□ -0.34
SLC46A1-209ENST00000619923 A2ML1A8K2U0 1454 aa12.94□□□□□ -0.34
SLC46A1-209ENST00000619923 RNF17Q9BXT8 1623 aaKnown RBP12.94□□□□□ -0.34
SLC46A1-209ENST00000619923 CEP162Q5TB80 1403 aa12.94□□□□□ -0.34
SLC46A1-209ENST00000619923 KDM5DQ9BY66 1539 aa12.93□□□□□ -0.34
SLC46A1-209ENST00000619923 NCKAP5LQ9HCH0 1330 aa12.93□□□□□ -0.34
SLC46A1-209ENST00000619923 CAMSAP2Q08AD1 1489 aa12.93□□□□□ -0.34
SLC46A1-209ENST00000619923 MROH1Q8NDA8 1641 aa12.93□□□□□ -0.34
SLC46A1-209ENST00000619923 VWDEQ8N2E2 1590 aa12.93□□□□□ -0.34
SLC46A1-209ENST00000619923 FAM135AQ9P2D6 1515 aa12.92□□□□□ -0.34
SLC46A1-209ENST00000619923 CEP152O94986 1710 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms