RNA–Protein interactions for RNA: ENST00000619259.4

SEM1-220, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 462 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-220ENST00000619259 TPRNQ4KMQ1 711 aa9.36□□□□□ -0.91
SEM1-220ENST00000619259 TMC2Q8TDI7 906 aa9.36□□□□□ -0.91
SEM1-220ENST00000619259 L3MBTL3Q96JM7 780 aaPredicted RBP9.36□□□□□ -0.91
SEM1-220ENST00000619259 PRKCSHP14314 528 aaPredicted RBP9.35□□□□□ -0.91
SEM1-220ENST00000619259 C7P10643 843 aa9.34□□□□□ -0.91
SEM1-220ENST00000619259 GPHNQ9NQX3 736 aaPredicted RBP9.34□□□□□ -0.91
SEM1-220ENST00000619259 COLQQ9Y215 455 aaPredicted RBP9.34□□□□□ -0.91
SEM1-220ENST00000619259 MFSD10Q14728 455 aa9.33□□□□□ -0.92
SEM1-220ENST00000619259 METRNQ9UJH8 293 aa9.33□□□□□ -0.92
SEM1-220ENST00000619259 PPP1R15BQ5SWA1 713 aa9.32□□□□□ -0.92
SEM1-220ENST00000619259 ARHGEF1Q92888 912 aaKnown RBP9.32□□□□□ -0.92
SEM1-220ENST00000619259 POTEIP0CG38 1075 aa9.31□□□□□ -0.92
SEM1-220ENST00000619259 TMEM121BQ9BXQ6 578 aaPredicted RBP9.29□□□□□ -0.92
SEM1-220ENST00000619259 DSG2Q14126 1118 aa9.28□□□□□ -0.92
SEM1-220ENST00000619259 C2orf72A6NCS6 295 aa9.27□□□□□ -0.93
SEM1-220ENST00000619259 TULP1O00294 542 aaPredicted RBP9.27□□□□□ -0.93
SEM1-220ENST00000619259 NISCHQ9Y2I1 1504 aa9.26□□□□□ -0.93
SEM1-220ENST00000619259 POTEFA5A3E0 1075 aa9.26□□□□□ -0.93
SEM1-220ENST00000619259 C3orf67Q6ZVT6 689 aa9.26□□□□□ -0.93
SEM1-220ENST00000619259 FOXK1P85037 733 aa9.25□□□□□ -0.93
SEM1-220ENST00000619259 PLPP6Q8IY26 295 aa9.25□□□□□ -0.93
SEM1-220ENST00000619259 SEMA3EO15041 775 aa9.24□□□□□ -0.93
SEM1-220ENST00000619259 CAMK2BQ13554 666 aa9.24□□□□□ -0.93
SEM1-220ENST00000619259 DPYSL4O14531 572 aa9.21□□□□□ -0.94
SEM1-220ENST00000619259 KIF3CO14782 793 aa9.2□□□□□ -0.94
SEM1-220ENST00000619259 TMEM92Q6UXU6 159 aa9.2□□□□□ -0.94
SEM1-220ENST00000619259 LMOD2Q6P5Q4 547 aa9.19□□□□□ -0.94
SEM1-220ENST00000619259 EMILIN3Q9NT22 766 aa9.19□□□□□ -0.94
SEM1-220ENST00000619259 MAP3K9P80192 1104 aa9.18□□□□□ -0.94
SEM1-220ENST00000619259 SMYD5Q6GMV2 418 aa9.18□□□□□ -0.94
SEM1-220ENST00000619259 UPF1Q92900 1129 aaKnown RBP eCLIP9.18□□□□□ -0.94
SEM1-220ENST00000619259 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.18□□□□□ -0.94
SEM1-220ENST00000619259 ARIH1Q9Y4X5 557 aaPredicted RBP9.18□□□□□ -0.94
SEM1-220ENST00000619259 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.17□□□□□ -0.94
SEM1-220ENST00000619259 TESPA1A2RU30 521 aaPredicted RBP9.16□□□□□ -0.94
SEM1-220ENST00000619259 SPDYE16A6NNV3 312 aaPredicted RBP9.13□□□□□ -0.95
SEM1-220ENST00000619259 TBC1D12O60347 775 aa9.11□□□□□ -0.95
SEM1-220ENST00000619259 MLLT3P42568 568 aaPredicted RBP9.11□□□□□ -0.95
SEM1-220ENST00000619259 PDIA6Q15084 440 aa9.1□□□□□ -0.95
SEM1-220ENST00000619259 GRXCR2A6NFK2 248 aa9.08□□□□□ -0.96
SEM1-220ENST00000619259 OXER1Q8TDS5 423 aa9.08□□□□□ -0.96
SEM1-220ENST00000619259 RBM26Q5T8P6 1007 aaKnown RBP9.06□□□□□ -0.96
SEM1-220ENST00000619259 ZNF316A6NFI3 1004 aaPredicted RBP9.05□□□□□ -0.96
SEM1-220ENST00000619259 ZC3H15Q8WU90 426 aaKnown RBP9.05□□□□□ -0.96
SEM1-220ENST00000619259 SCUBE2Q9NQ36 999 aa9.05□□□□□ -0.96
SEM1-220ENST00000619259 POTEB2H3BUK9 544 aa9.04□□□□□ -0.96
SEM1-220ENST00000619259 EVI5O60447 810 aa9.04□□□□□ -0.96
SEM1-220ENST00000619259 SLAIN1Q8ND83 568 aa9.04□□□□□ -0.96
SEM1-220ENST00000619259 POTEJP0CG39 1038 aa9.03□□□□□ -0.96
SEM1-220ENST00000619259 PTCD2Q8WV60 388 aaKnown RBP9.03□□□□□ -0.96
SEM1-220ENST00000619259 DDX12PQ92771 950 aa9.03□□□□□ -0.96
SEM1-220ENST00000619259 MAMSTRQ6ZN01 415 aa9.02□□□□□ -0.97
SEM1-220ENST00000619259 GPIHBP1Q8IV16 184 aa9.02□□□□□ -0.97
SEM1-220ENST00000619259 SLC34A2O95436 690 aa9.01□□□□□ -0.97
SEM1-220ENST00000619259 PCDHGA4Q9Y5G9 962 aa8.99□□□□□ -0.97
SEM1-220ENST00000619259 NUTM2FA1L443 756 aa8.98□□□□□ -0.97
SEM1-220ENST00000619259 DOK7Q18PE1 504 aa8.97□□□□□ -0.97
SEM1-220ENST00000619259 RIMBP2O15034 1052 aa8.96□□□□□ -0.98
SEM1-220ENST00000619259 PTGER2P43116 358 aa8.96□□□□□ -0.98
SEM1-220ENST00000619259 KRI1Q8N9T8 703 aaKnown RBP8.96□□□□□ -0.98
SEM1-220ENST00000619259 ZNF710Q8N1W2 664 aa8.95□□□□□ -0.98
SEM1-220ENST00000619259 SLC24A3Q9HC58 644 aa8.95□□□□□ -0.98
SEM1-220ENST00000619259 OSBPP22059 807 aa8.94□□□□□ -0.98
SEM1-220ENST00000619259 ZMYND10O75800 440 aa8.93□□□□□ -0.98
SEM1-220ENST00000619259 ARSIQ5FYB1 569 aa8.93□□□□□ -0.98
SEM1-220ENST00000619259 ANO8Q9HCE9 1232 aaPredicted RBP8.93□□□□□ -0.98
SEM1-220ENST00000619259 KHSRPQ92945 711 aaKnown RBP eCLIP8.92□□□□□ -0.981e-7■□□□□ 8
SEM1-220ENST00000619259 NUDT7P0C024 238 aa8.91□□□□□ -0.98
SEM1-220ENST00000619259 BARGINQ6ZT62 677 aa8.91□□□□□ -0.98
SEM1-220ENST00000619259 RBM33Q96EV2 1170 aaKnown RBP8.91□□□□□ -0.98
SEM1-220ENST00000619259 PHF14O94880 888 aa8.9□□□□□ -0.98
SEM1-220ENST00000619259 HOXB3P14651 431 aaPredicted RBP8.9□□□□□ -0.98
SEM1-220ENST00000619259 MAP3K7O43318 606 aa8.89□□□□□ -0.99
SEM1-220ENST00000619259 EPAS1Q99814 870 aa8.89□□□□□ -0.99
SEM1-220ENST00000619259 SNPHO15079 494 aa8.88□□□□□ -0.99
SEM1-220ENST00000619259 ZSWIM6Q9HCJ5 1215 aa8.88□□□□□ -0.99
SEM1-220ENST00000619259 FCHSD2O94868 740 aa8.87□□□□□ -0.99
SEM1-220ENST00000619259 PRIM1P49642 420 aaKnown RBP8.87□□□□□ -0.99
SEM1-220ENST00000619259 TYW1BQ6NUM6 668 aa8.87□□□□□ -0.99
SEM1-220ENST00000619259 ZNF454Q8N9F8 522 aa8.87□□□□□ -0.99
SEM1-220ENST00000619259 PCDHGA10Q9Y5H3 936 aa8.87□□□□□ -0.99
SEM1-220ENST00000619259 EN1Q05925 392 aaPredicted RBP8.86□□□□□ -0.99
SEM1-220ENST00000619259 NEUROD2Q15784 382 aa8.85□□□□□ -0.99
SEM1-220ENST00000619259 LHX8Q68G74 356 aa8.85□□□□□ -0.99
SEM1-220ENST00000619259 GPR153Q6NV75 609 aa8.85□□□□□ -0.99
SEM1-220ENST00000619259 OTUD5Q96G74 571 aa8.85□□□□□ -0.99
SEM1-220ENST00000619259 JPH4Q96JJ6 628 aa8.85□□□□□ -0.99
SEM1-220ENST00000619259 AK7Q96M32 723 aa8.85□□□□□ -0.99
SEM1-220ENST00000619259 GNPATO15228 680 aa8.84□□□□□ -0.99
SEM1-220ENST00000619259 HIC1Q14526 733 aa8.84□□□□□ -0.99
SEM1-220ENST00000619259 FBXW7Q969H0 707 aa8.84□□□□□ -0.99
SEM1-220ENST00000619259 KDM4FA0A1W2PPD8 638 aa8.83□□□□□ -1
SEM1-220ENST00000619259 GPR37O15354 613 aa8.83□□□□□ -1
SEM1-220ENST00000619259 CDHR5Q9HBB8 845 aa8.83□□□□□ -1
SEM1-220ENST00000619259 FOSBP53539 338 aa8.82□□□□□ -1
SEM1-220ENST00000619259 TSR1Q2NL82 804 aaKnown RBP8.82□□□□□ -1
SEM1-220ENST00000619259 ZDHHC16Q969W1 377 aa8.82□□□□□ -1
SEM1-220ENST00000619259 LHX6Q9UPM6 363 aa8.82□□□□□ -1
SEM1-220ENST00000619259 PTGDRQ13258 359 aa8.81□□□□□ -1
SEM1-220ENST00000619259 FECHP22830 423 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms