RNA–Protein interactions for RNA: ENST00000618778.4

GTDC1-220, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5 BASIC

Gene GTDC1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-220ENST00000618778 KDM6BO15054 1643 aa8.57□□□□□ -1.04
GTDC1-220ENST00000618778 HECW1Q76N89 1606 aa8.57□□□□□ -1.04
GTDC1-220ENST00000618778 TTC37Q6PGP7 1564 aa8.56□□□□□ -1.04
GTDC1-220ENST00000618778 KIF14Q15058 1648 aa8.55□□□□□ -1.04
GTDC1-220ENST00000618778 ABCA9Q8IUA7 1624 aa8.55□□□□□ -1.04
GTDC1-220ENST00000618778 COL17A1Q9UMD9 1497 aaPredicted RBP8.54□□□□□ -1.04
GTDC1-220ENST00000618778 POLA2Q14181 598 aa8.54□□□□□ -1.04
GTDC1-220ENST00000618778 CLIP1P30622 1438 aa8.54□□□□□ -1.04
GTDC1-220ENST00000618778 KCNH8Q96L42 1107 aa8.53□□□□□ -1.04
GTDC1-220ENST00000618778 MAGI3Q5TCQ9 1506 aa8.53□□□□□ -1.04
GTDC1-220ENST00000618778 CEP162Q5TB80 1403 aa8.52□□□□□ -1.05
GTDC1-220ENST00000618778 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.52□□□□□ -1.05
GTDC1-220ENST00000618778 FMN1Q68DA7 1419 aa8.52□□□□□ -1.05
GTDC1-220ENST00000618778 ATXN8OSP0DMR3 200 aa8.52□□□□□ -1.05
GTDC1-220ENST00000618778 CD109Q6YHK3 1445 aa8.5□□□□□ -1.05
GTDC1-220ENST00000618778 ATP1B4Q9UN42 357 aaPredicted RBP8.49□□□□□ -1.05
GTDC1-220ENST00000618778 FRMPD1Q5SYB0 1578 aa8.49□□□□□ -1.05
GTDC1-220ENST00000618778 CASKIN1Q8WXD9 1431 aa8.48□□□□□ -1.05
GTDC1-220ENST00000618778 MYO5CQ9NQX4 1742 aa8.48□□□□□ -1.05
GTDC1-220ENST00000618778 FYCO1Q9BQS8 1478 aa8.48□□□□□ -1.05
GTDC1-220ENST00000618778 TEX14Q8IWB6 1497 aa8.48□□□□□ -1.05
GTDC1-220ENST00000618778 CDC42BPBQ9Y5S2 1711 aa8.47□□□□□ -1.05
GTDC1-220ENST00000618778 CDC42BPAQ5VT25 1732 aa8.46□□□□□ -1.05
GTDC1-220ENST00000618778 RICTORQ6R327 1708 aa8.46□□□□□ -1.06
GTDC1-220ENST00000618778 SIGLEC1Q9BZZ2 1709 aa8.45□□□□□ -1.06
GTDC1-220ENST00000618778 CCDC18Q5T9S5 1454 aa8.44□□□□□ -1.06
GTDC1-220ENST00000618778 PREX2Q70Z35 1606 aa8.44□□□□□ -1.06
GTDC1-220ENST00000618778 TROQ12816 1431 aaPredicted RBP8.44□□□□□ -1.06
GTDC1-220ENST00000618778 PCGF6Q9BYE7 350 aa8.43□□□□□ -1.06
GTDC1-220ENST00000618778 FANCAO15360 1455 aa8.42□□□□□ -1.06
GTDC1-220ENST00000618778 PLEKHD1A6NEE1 506 aa8.42□□□□□ -1.06
GTDC1-220ENST00000618778 CFAP74Q9C0B2 1584 aa8.42□□□□□ -1.06
GTDC1-220ENST00000618778 ARAP3Q8WWN8 1544 aa8.42□□□□□ -1.06
GTDC1-220ENST00000618778 NEO1Q92859 1461 aa8.4□□□□□ -1.06
GTDC1-220ENST00000618778 TIAM1Q13009 1591 aa8.4□□□□□ -1.06
GTDC1-220ENST00000618778 ITSN2Q9NZM3 1697 aa8.4□□□□□ -1.06
GTDC1-220ENST00000618778 ARHGAP5Q13017 1502 aa8.4□□□□□ -1.06
GTDC1-220ENST00000618778 RAPGEF3O95398 923 aa8.4□□□□□ -1.07
GTDC1-220ENST00000618778 VPS8Q8N3P4 1428 aa8.4□□□□□ -1.07
GTDC1-220ENST00000618778 AKNAQ7Z591 1439 aa8.39□□□□□ -1.07
GTDC1-220ENST00000618778 SAMD9LQ8IVG5 1584 aa8.39□□□□□ -1.07
GTDC1-220ENST00000618778 EHBP1L1Q8N3D4 1523 aa8.39□□□□□ -1.07
GTDC1-220ENST00000618778 ARHGEF40Q8TER5 1519 aa8.39□□□□□ -1.07
GTDC1-220ENST00000618778 PLCH2O75038 1416 aa8.39□□□□□ -1.07
GTDC1-220ENST00000618778 ABCC1P33527 1531 aa8.38□□□□□ -1.07
GTDC1-220ENST00000618778 ADGRL1O94910 1474 aa8.38□□□□□ -1.07
GTDC1-220ENST00000618778 ARHGEF12Q9NZN5 1544 aa8.38□□□□□ -1.07
GTDC1-220ENST00000618778 ZMYM4Q5VZL5 1548 aa8.37□□□□□ -1.07
GTDC1-220ENST00000618778 YEATS2Q9ULM3 1422 aa8.37□□□□□ -1.07
GTDC1-220ENST00000618778 ZBTB12Q9Y330 459 aaPredicted RBP8.36□□□□□ -1.07
GTDC1-220ENST00000618778 SYCP2Q9BX26 1530 aa8.36□□□□□ -1.07
GTDC1-220ENST00000618778 POGZQ7Z3K3 1410 aa8.36□□□□□ -1.07
GTDC1-220ENST00000618778 SUPT6HQ7KZ85 1726 aaKnown RBP8.36□□□□□ -1.07
GTDC1-220ENST00000618778 KDM4FA0A1W2PPD8 638 aa8.36□□□□□ -1.07
GTDC1-220ENST00000618778 HRCP23327 699 aa8.36□□□□□ -1.07
GTDC1-220ENST00000618778 DENND4BO75064 1496 aaPredicted RBP8.36□□□□□ -1.07
GTDC1-220ENST00000618778 ABCA6Q8N139 1617 aa8.36□□□□□ -1.07
GTDC1-220ENST00000618778 GPATCH8Q9UKJ3 1502 aaKnown RBP8.35□□□□□ -1.07
GTDC1-220ENST00000618778 SCAPERQ9BY12 1400 aa8.35□□□□□ -1.07
GTDC1-220ENST00000618778 KDM5CP41229 1560 aa8.35□□□□□ -1.07
GTDC1-220ENST00000618778 MTUS2Q5JR59 1369 aa8.34□□□□□ -1.07
GTDC1-220ENST00000618778 TRIM26Q12899 539 aaPredicted RBP8.34□□□□□ -1.07
GTDC1-220ENST00000618778 RBM42Q9BTD8 480 aaKnown RBP8.34□□□□□ -1.07
GTDC1-220ENST00000618778 ZFYVE16Q7Z3T8 1539 aa8.34□□□□□ -1.07
GTDC1-220ENST00000618778 HECW2Q9P2P5 1572 aa8.34□□□□□ -1.07
GTDC1-220ENST00000618778 TRAPPC8Q9Y2L5 1435 aa8.34□□□□□ -1.07
GTDC1-220ENST00000618778 CDK11AQ9UQ88 783 aaPredicted RBP8.34□□□□□ -1.08
GTDC1-220ENST00000618778 KIDINS220Q9ULH0 1771 aa8.34□□□□□ -1.08
GTDC1-220ENST00000618778 BCORL1Q5H9F3 1711 aa8.33□□□□□ -1.08
GTDC1-220ENST00000618778 NCOA2Q15596 1464 aa8.33□□□□□ -1.08
GTDC1-220ENST00000618778 LRRC9Q6ZRR7 1453 aa8.33□□□□□ -1.08
GTDC1-220ENST00000618778 DIP2CQ9Y2E4 1556 aa8.33□□□□□ -1.08
GTDC1-220ENST00000618778 MADDQ8WXG6 1647 aa8.33□□□□□ -1.08
GTDC1-220ENST00000618778 KANK4Q5T7N3 995 aaPredicted RBP8.32□□□□□ -1.08
GTDC1-220ENST00000618778 ADAMTSL3P82987 1691 aa8.32□□□□□ -1.08
GTDC1-220ENST00000618778 PHLDB1Q86UU1 1377 aa8.31□□□□□ -1.08
GTDC1-220ENST00000618778 RIMS1Q86UR5 1692 aaKnown RBP8.31□□□□□ -1.08
GTDC1-220ENST00000618778 ZNF644Q9H582 1327 aaPredicted RBP8.31□□□□□ -1.08
GTDC1-220ENST00000618778 ZNF518AQ6AHZ1 1483 aa8.31□□□□□ -1.08
GTDC1-220ENST00000618778 INO80Q9ULG1 1556 aaPredicted RBP8.3□□□□□ -1.08
GTDC1-220ENST00000618778 CCNB3Q8WWL7 1395 aa8.3□□□□□ -1.08
GTDC1-220ENST00000618778 AFAP1Q8N556 730 aa8.3□□□□□ -1.08
GTDC1-220ENST00000618778 ZNF777Q9ULD5 760 aaPredicted RBP8.3□□□□□ -1.08
GTDC1-220ENST00000618778 FER1L4A9Z1Z3 1794 aa8.29□□□□□ -1.08
GTDC1-220ENST00000618778 EFCAB2Q5VUJ9 269 aa8.29□□□□□ -1.08
GTDC1-220ENST00000618778 CAMSAP2Q08AD1 1489 aa8.29□□□□□ -1.08
GTDC1-220ENST00000618778 ADGBQ8N7X0 1667 aa8.29□□□□□ -1.08
GTDC1-220ENST00000618778 MAP3K1Q13233 1512 aa8.28□□□□□ -1.08
GTDC1-220ENST00000618778 ATP7AQ04656 1500 aa8.27□□□□□ -1.09
GTDC1-220ENST00000618778 HNRNPMP52272 730 aaKnown RBP eCLIP8.27□□□□□ -1.09
GTDC1-220ENST00000618778 MBD5Q9P267 1494 aa8.27□□□□□ -1.09
GTDC1-220ENST00000618778 CROCC2H7BZ55 1655 aa8.26□□□□□ -1.09
GTDC1-220ENST00000618778 C9orf84Q5VXU9 1444 aa8.26□□□□□ -1.09
GTDC1-220ENST00000618778 MAGI2Q86UL8 1455 aa8.26□□□□□ -1.09
GTDC1-220ENST00000618778 CFDP1Q9UEE9 299 aaPredicted RBP8.25□□□□□ -1.09
GTDC1-220ENST00000618778 MLH3Q9UHC1 1453 aa8.25□□□□□ -1.09
GTDC1-220ENST00000618778 PLXNC1O60486 1568 aa8.25□□□□□ -1.09
GTDC1-220ENST00000618778 PTPN23Q9H3S7 1636 aa8.24□□□□□ -1.09
GTDC1-220ENST00000618778 ATP10AO60312 1499 aa8.24□□□□□ -1.09
GTDC1-220ENST00000618778 REREQ9P2R6 1566 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms