RNA–Protein interactions for RNA: ENST00000618318.1

RPRD1B-208, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-208ENST00000618318 NCOA2Q15596 1464 aa11.76□□□□□ -0.53
RPRD1B-208ENST00000618318 ABCA8O94911 1581 aa11.76□□□□□ -0.53
RPRD1B-208ENST00000618318 CCER1Q8TC90 406 aaPredicted RBP11.76□□□□□ -0.53
RPRD1B-208ENST00000618318 SUPT6HQ7KZ85 1726 aaKnown RBP11.76□□□□□ -0.53
RPRD1B-208ENST00000618318 TROQ12816 1431 aaPredicted RBP11.76□□□□□ -0.53
RPRD1B-208ENST00000618318 HOXD11P31277 338 aaPredicted RBP11.75□□□□□ -0.53
RPRD1B-208ENST00000618318 CDK13Q14004 1512 aaKnown RBP11.75□□□□□ -0.53
RPRD1B-208ENST00000618318 MYOM3Q5VTT5 1437 aa11.74□□□□□ -0.53
RPRD1B-208ENST00000618318 MIA2Q96PC5 1412 aa11.74□□□□□ -0.53
RPRD1B-208ENST00000618318 ATP10BO94823 1461 aa11.73□□□□□ -0.53
RPRD1B-208ENST00000618318 ITGAEP38570 1179 aa11.73□□□□□ -0.53
RPRD1B-208ENST00000618318 FGD6Q6ZV73 1430 aa11.73□□□□□ -0.53
RPRD1B-208ENST00000618318 MAP3K4Q9Y6R4 1608 aa11.72□□□□□ -0.53
RPRD1B-208ENST00000618318 ABCC2Q92887 1545 aa11.72□□□□□ -0.53
RPRD1B-208ENST00000618318 UHRF1BP1LA0JNW5 1464 aa11.7□□□□□ -0.54
RPRD1B-208ENST00000618318 ASXL2Q76L83 1435 aa11.7□□□□□ -0.54
RPRD1B-208ENST00000618318 ACIN1Q9UKV3 1341 aaKnown RBP11.7□□□□□ -0.54
RPRD1B-208ENST00000618318 LRRIQ1Q96JM4 1722 aa11.7□□□□□ -0.54
RPRD1B-208ENST00000618318 CFDP1Q9UEE9 299 aaPredicted RBP11.69□□□□□ -0.54
RPRD1B-208ENST00000618318 MAGI3Q5TCQ9 1506 aa11.69□□□□□ -0.54
RPRD1B-208ENST00000618318 COL17A1Q9UMD9 1497 aaPredicted RBP11.69□□□□□ -0.54
RPRD1B-208ENST00000618318 RNF216Q9NWF9 866 aaPredicted RBP11.67□□□□□ -0.54
RPRD1B-208ENST00000618318 SETD5Q9C0A6 1442 aa11.65□□□□□ -0.54
RPRD1B-208ENST00000618318 ZCCHC11Q5TAX3 1644 aaKnown RBP11.64□□□□□ -0.55
RPRD1B-208ENST00000618318 TCOF1Q13428 1488 aaKnown RBP11.64□□□□□ -0.55
RPRD1B-208ENST00000618318 CLSPNQ9HAW4 1339 aa11.64□□□□□ -0.55
RPRD1B-208ENST00000618318 RSPH4AQ5TD94 716 aa11.64□□□□□ -0.55
RPRD1B-208ENST00000618318 TEX14Q8IWB6 1497 aa11.63□□□□□ -0.55
RPRD1B-208ENST00000618318 KDM5BQ9UGL1 1544 aa11.63□□□□□ -0.55
RPRD1B-208ENST00000618318 PTPN23Q9H3S7 1636 aa11.63□□□□□ -0.55
RPRD1B-208ENST00000618318 KIF14Q15058 1648 aa11.62□□□□□ -0.55
RPRD1B-208ENST00000618318 GPATCH8Q9UKJ3 1502 aaKnown RBP11.61□□□□□ -0.55
RPRD1B-208ENST00000618318 KCNH8Q96L42 1107 aa11.61□□□□□ -0.55
RPRD1B-208ENST00000618318 ZNF777Q9ULD5 760 aaPredicted RBP11.61□□□□□ -0.55
RPRD1B-208ENST00000618318 RNF39Q9H2S5 420 aa11.6□□□□□ -0.55
RPRD1B-208ENST00000618318 TSPY4P0CV99 314 aa11.59□□□□□ -0.55
RPRD1B-208ENST00000618318 TSPY10P0CW01 314 aa11.59□□□□□ -0.55
RPRD1B-208ENST00000618318 ITSN2Q9NZM3 1697 aa11.59□□□□□ -0.55
RPRD1B-208ENST00000618318 RAB3GAP2Q9H2M9 1393 aa11.58□□□□□ -0.56
RPRD1B-208ENST00000618318 EFCAB2Q5VUJ9 269 aa11.58□□□□□ -0.56
RPRD1B-208ENST00000618318 ROCK1Q13464 1354 aa11.56□□□□□ -0.56
RPRD1B-208ENST00000618318 AKNAQ7Z591 1439 aa11.56□□□□□ -0.56
RPRD1B-208ENST00000618318 CHIC2Q9UKJ5 165 aa11.56□□□□□ -0.56
RPRD1B-208ENST00000618318 HFM1A2PYH4 1435 aa11.55□□□□□ -0.56
RPRD1B-208ENST00000618318 DAPK1P53355 1430 aa11.55□□□□□ -0.56
RPRD1B-208ENST00000618318 ZNF644Q9H582 1327 aaPredicted RBP11.55□□□□□ -0.56
RPRD1B-208ENST00000618318 FBXO41Q8TF61 875 aa11.54□□□□□ -0.56
RPRD1B-208ENST00000618318 RRP7BPQ9NSQ0 103 aa11.54□□□□□ -0.56
RPRD1B-208ENST00000618318 PLEKHH2Q8IVE3 1493 aa11.54□□□□□ -0.56
RPRD1B-208ENST00000618318 WDR7Q9Y4E6 1490 aa11.54□□□□□ -0.56
RPRD1B-208ENST00000618318 DHX57Q6P158 1386 aaKnown RBP11.54□□□□□ -0.56
RPRD1B-208ENST00000618318 ABCC5O15440 1437 aa11.53□□□□□ -0.56
RPRD1B-208ENST00000618318 CAMSAP2Q08AD1 1489 aa11.53□□□□□ -0.56
RPRD1B-208ENST00000618318 NCBP3Q53F19 620 aaKnown RBP11.53□□□□□ -0.56
RPRD1B-208ENST00000618318 ANKRD30AQ9BXX3 1397 aa11.53□□□□□ -0.56
RPRD1B-208ENST00000618318 PLCH2O75038 1416 aa11.52□□□□□ -0.56
RPRD1B-208ENST00000618318 PTPRKQ15262 1439 aa11.52□□□□□ -0.56
RPRD1B-208ENST00000618318 NAIPQ13075 1403 aa11.52□□□□□ -0.57
RPRD1B-208ENST00000618318 KIAA1107Q9UPP5 1409 aa11.51□□□□□ -0.57
RPRD1B-208ENST00000618318 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.5□□□□□ -0.57
RPRD1B-208ENST00000618318 ADAMTSL3P82987 1691 aa11.5□□□□□ -0.57
RPRD1B-208ENST00000618318 HNRNPMP52272 730 aaKnown RBP eCLIP11.5□□□□□ -0.576e-7■■■■■ 28.4
RPRD1B-208ENST00000618318 TRIM52Q96A61 297 aa11.5□□□□□ -0.57
RPRD1B-208ENST00000618318 ARHGAP5Q13017 1502 aa11.5□□□□□ -0.57
RPRD1B-208ENST00000618318 DNMT1P26358 1616 aaKnown RBP11.49□□□□□ -0.57
RPRD1B-208ENST00000618318 TIMELESSQ9UNS1 1208 aa11.48□□□□□ -0.57
RPRD1B-208ENST00000618318 ARAP3Q8WWN8 1544 aa11.48□□□□□ -0.57
RPRD1B-208ENST00000618318 CDC42BPAQ5VT25 1732 aa11.48□□□□□ -0.57
RPRD1B-208ENST00000618318 SHANK2Q9UPX8 1470 aa11.47□□□□□ -0.57
RPRD1B-208ENST00000618318 C1QBPQ07021 282 aaKnown RBP11.47□□□□□ -0.57
RPRD1B-208ENST00000618318 PREX2Q70Z35 1606 aa11.46□□□□□ -0.57
RPRD1B-208ENST00000618318 NCOA1Q15788 1441 aa11.46□□□□□ -0.57
RPRD1B-208ENST00000618318 CD109Q6YHK3 1445 aa11.46□□□□□ -0.57
RPRD1B-208ENST00000618318 ARHGEF5Q12774 1597 aa11.45□□□□□ -0.58
RPRD1B-208ENST00000618318 ADGRL2O95490 1459 aa11.45□□□□□ -0.58
RPRD1B-208ENST00000618318 CCDC141Q6ZP82 1450 aa11.45□□□□□ -0.58
RPRD1B-208ENST00000618318 PTPRMP28827 1452 aa11.44□□□□□ -0.58
RPRD1B-208ENST00000618318 MBD5Q9P267 1494 aa11.44□□□□□ -0.58
RPRD1B-208ENST00000618318 C9orf84Q5VXU9 1444 aa11.44□□□□□ -0.58
RPRD1B-208ENST00000618318 MYO5CQ9NQX4 1742 aa11.44□□□□□ -0.58
RPRD1B-208ENST00000618318 BCORL1Q5H9F3 1711 aa11.43□□□□□ -0.58
RPRD1B-208ENST00000618318 TTC37Q6PGP7 1564 aa11.43□□□□□ -0.58
RPRD1B-208ENST00000618318 MPHOSPH9Q99550 1183 aa11.42□□□□□ -0.58
RPRD1B-208ENST00000618318 CDC42BPBQ9Y5S2 1711 aa11.42□□□□□ -0.58
RPRD1B-208ENST00000618318 MADDQ8WXG6 1647 aa11.42□□□□□ -0.58
RPRD1B-208ENST00000618318 SAMD9LQ8IVG5 1584 aa11.41□□□□□ -0.58
RPRD1B-208ENST00000618318 GCC2Q8IWJ2 1684 aa11.41□□□□□ -0.58
RPRD1B-208ENST00000618318 LMTK3Q96Q04 1460 aa11.41□□□□□ -0.58
RPRD1B-208ENST00000618318 ABCA9Q8IUA7 1624 aa11.41□□□□□ -0.58
RPRD1B-208ENST00000618318 ANKRD50Q9ULJ7 1429 aa11.41□□□□□ -0.58
RPRD1B-208ENST00000618318 SPAG9O60271 1321 aaKnown RBP11.4□□□□□ -0.58
RPRD1B-208ENST00000618318 FANCAO15360 1455 aa11.4□□□□□ -0.58
RPRD1B-208ENST00000618318 FRMPD1Q5SYB0 1578 aa11.4□□□□□ -0.58
RPRD1B-208ENST00000618318 KIF15Q9NS87 1388 aa11.4□□□□□ -0.59
RPRD1B-208ENST00000618318 RTEL1-TNFRSF6BF6WH68 1400 aa11.39□□□□□ -0.59
RPRD1B-208ENST00000618318 SLC4A1APQ9BWU0 796 aaKnown RBP11.39□□□□□ -0.59
RPRD1B-208ENST00000618318 MYT1LQ9UL68 1186 aa11.39□□□□□ -0.59
RPRD1B-208ENST00000618318 ADGBQ8N7X0 1667 aa11.39□□□□□ -0.59
RPRD1B-208ENST00000618318 NEUROD1Q13562 356 aa11.38□□□□□ -0.59
RPRD1B-208ENST00000618318 SYCP2Q9BX26 1530 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms