RNA–Protein interactions for RNA: ENST00000618278.4

SLC6A6-207, Transcript of solute carrier family 6 member 6, humanhuman

TSL 5

Gene SLC6A6, Length 6,401 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-207ENST00000618278 ERCC6Q03468 1493 aa14.26□□□□□ -0.13
SLC6A6-207ENST00000618278 NRDCO43847 1150 aa14.26□□□□□ -0.13
SLC6A6-207ENST00000618278 EVA1CP58658 441 aa14.26□□□□□ -0.13
SLC6A6-207ENST00000618278 CEP89Q96ST8 783 aa14.26□□□□□ -0.13
SLC6A6-207ENST00000618278 TOMM22Q9NS69 142 aa14.25□□□□□ -0.13
SLC6A6-207ENST00000618278 HSP90B1P14625 803 aaKnown RBP14.24□□□□□ -0.13
SLC6A6-207ENST00000618278 HSP90AB1P08238 724 aaKnown RBP14.23□□□□□ -0.13
SLC6A6-207ENST00000618278 L1TD1Q5T7N2 865 aaKnown RBP14.23□□□□□ -0.13
SLC6A6-207ENST00000618278 VSIG10Q8N0Z9 540 aa14.22□□□□□ -0.13
SLC6A6-207ENST00000618278 MTUS2Q5JR59 1369 aa14.2□□□□□ -0.14
SLC6A6-207ENST00000618278 WDR70Q9NW82 654 aa14.2□□□□□ -0.14
SLC6A6-207ENST00000618278 SYTL4Q96C24 671 aaPredicted RBP14.18□□□□□ -0.14
SLC6A6-207ENST00000618278 CC2D1BQ5T0F9 858 aaKnown RBP14.17□□□□□ -0.14
SLC6A6-207ENST00000618278 GGT6Q6P531 493 aa14.17□□□□□ -0.14
SLC6A6-207ENST00000618278 LTV1Q96GA3 475 aaPredicted RBP14.17□□□□□ -0.14
SLC6A6-207ENST00000618278 SF3B2Q13435 895 aaKnown RBP14.16□□□□□ -0.14
SLC6A6-207ENST00000618278 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.16□□□□□ -0.148e-7■■■■■ 68.8
SLC6A6-207ENST00000618278 CCAR1Q8IX12 1150 aaKnown RBP14.15□□□□□ -0.14
SLC6A6-207ENST00000618278 CFAP44Q96MT7 982 aa14.15□□□□□ -0.14
SLC6A6-207ENST00000618278 PPM1FP49593 454 aaPredicted RBP14.14□□□□□ -0.15
SLC6A6-207ENST00000618278 PAF1Q8N7H5 531 aa14.14□□□□□ -0.15
SLC6A6-207ENST00000618278 NUTM2FA1L443 756 aa14.14□□□□□ -0.15
SLC6A6-207ENST00000618278 CDCA8Q53HL2 280 aa14.14□□□□□ -0.15
SLC6A6-207ENST00000618278 RGS3P49796 1198 aa14.13□□□□□ -0.15
SLC6A6-207ENST00000618278 SPRYD3Q8NCJ5 442 aa14.13□□□□□ -0.15
SLC6A6-207ENST00000618278 MCCP23508 829 aa14.12□□□□□ -0.15
SLC6A6-207ENST00000618278 KIAA1211Q6ZU35 1233 aa14.11□□□□□ -0.15
SLC6A6-207ENST00000618278 CSRNP3Q8WYN3 585 aa14.11□□□□□ -0.15
SLC6A6-207ENST00000618278 PES1O00541 588 aaKnown RBP14.1□□□□□ -0.15
SLC6A6-207ENST00000618278 DDRGK1Q96HY6 314 aa14.1□□□□□ -0.15
SLC6A6-207ENST00000618278 NOL10Q9BSC4 688 aaKnown RBP14.09□□□□□ -0.15
SLC6A6-207ENST00000618278 FOXD1Q16676 465 aa14.08□□□□□ -0.16
SLC6A6-207ENST00000618278 CARD11Q9BXL7 1154 aa14.08□□□□□ -0.16
SLC6A6-207ENST00000618278 IBSPP21815 317 aaPredicted RBP14.07□□□□□ -0.16
SLC6A6-207ENST00000618278 CFDP1Q9UEE9 299 aaPredicted RBP14.07□□□□□ -0.16
SLC6A6-207ENST00000618278 PAXIP1Q6ZW49 1069 aaPredicted RBP14.07□□□□□ -0.16
SLC6A6-207ENST00000618278 DHX16O60231 1041 aaKnown RBP14.06□□□□□ -0.16
SLC6A6-207ENST00000618278 EID1Q9Y6B2 187 aa14.06□□□□□ -0.16
SLC6A6-207ENST00000618278 NAP1L5Q96NT1 182 aaPredicted RBP14.06□□□□□ -0.16
SLC6A6-207ENST00000618278 PATL2C9JE40 543 aaKnown RBP14.06□□□□□ -0.16
SLC6A6-207ENST00000618278 NGEFQ8N5V2 710 aa14.05□□□□□ -0.16
SLC6A6-207ENST00000618278 NGDNQ8NEJ9 315 aaKnown RBP14.05□□□□□ -0.16
SLC6A6-207ENST00000618278 SLC4A3P48751 1232 aa14.05□□□□□ -0.16
SLC6A6-207ENST00000618278 KANK1Q14678 1352 aa14.04□□□□□ -0.16
SLC6A6-207ENST00000618278 NUTM2DQ5VT03 806 aaPredicted RBP14.04□□□□□ -0.16
SLC6A6-207ENST00000618278 CHMP4BQ9H444 224 aaKnown RBP14.04□□□□□ -0.16
SLC6A6-207ENST00000618278 CCDC43Q96MW1 224 aaKnown RBP14.03□□□□□ -0.16
SLC6A6-207ENST00000618278 HDGFL2Q7Z4V5 671 aaPredicted RBP14.03□□□□□ -0.16
SLC6A6-207ENST00000618278 TMEM132AQ24JP5 1023 aa14.03□□□□□ -0.16
SLC6A6-207ENST00000618278 AMOTL1Q8IY63 956 aa14.02□□□□□ -0.17
SLC6A6-207ENST00000618278 MORC1Q86VD1 984 aa14.01□□□□□ -0.17
SLC6A6-207ENST00000618278 VPS37DQ86XT2 251 aa14□□□□□ -0.17
SLC6A6-207ENST00000618278 PPP4R2Q9NY27 417 aa13.98□□□□□ -0.17
SLC6A6-207ENST00000618278 ARID3AQ99856 593 aa13.98□□□□□ -0.17
SLC6A6-207ENST00000618278 AMPHP49418 695 aa13.97□□□□□ -0.17
SLC6A6-207ENST00000618278 GPATCH3Q96I76 525 aa13.97□□□□□ -0.17
SLC6A6-207ENST00000618278 R3HCC1Q9Y3T6 440 aaKnown RBP13.97□□□□□ -0.17
SLC6A6-207ENST00000618278 SLC4A10Q6U841 1118 aa13.97□□□□□ -0.17
SLC6A6-207ENST00000618278 TRIM6-TRIM34B2RNG4 842 aa13.97□□□□□ -0.17
SLC6A6-207ENST00000618278 TPM4P67936 248 aa13.97□□□□□ -0.17
SLC6A6-207ENST00000618278 NOL8Q76FK4 1167 aaKnown RBP13.97□□□□□ -0.17
SLC6A6-207ENST00000618278 TPD52L1Q16890 204 aaPredicted RBP13.96□□□□□ -0.17
SLC6A6-207ENST00000618278 RBM33Q96EV2 1170 aaKnown RBP13.96□□□□□ -0.17
SLC6A6-207ENST00000618278 SPDYE4A6NLX3 237 aa13.96□□□□□ -0.17
SLC6A6-207ENST00000618278 WWC2Q6AWC2 1192 aa13.95□□□□□ -0.18
SLC6A6-207ENST00000618278 HSCBQ8IWL3 235 aa13.95□□□□□ -0.18
SLC6A6-207ENST00000618278 SPAG9O60271 1321 aaKnown RBP13.94□□□□□ -0.18
SLC6A6-207ENST00000618278 AKAP17AQ02040 695 aaKnown RBP13.93□□□□□ -0.18
SLC6A6-207ENST00000618278 STK31Q9BXU1 1019 aa13.93□□□□□ -0.18
SLC6A6-207ENST00000618278 CCDC34Q96HJ3 373 aa13.93□□□□□ -0.18
SLC6A6-207ENST00000618278 MS4A1P11836 297 aa13.92□□□□□ -0.18
SLC6A6-207ENST00000618278 FYB1O15117 783 aa13.92□□□□□ -0.18
SLC6A6-207ENST00000618278 MTMR7Q9Y216 660 aa13.92□□□□□ -0.18
SLC6A6-207ENST00000618278 CCDC97Q96F63 343 aaPredicted RBP13.92□□□□□ -0.18
SLC6A6-207ENST00000618278 NUTM2BA6NNL0 878 aaPredicted RBP13.91□□□□□ -0.18
SLC6A6-207ENST00000618278 NUTM2EB1AL46 878 aaPredicted RBP13.91□□□□□ -0.18
SLC6A6-207ENST00000618278 MYCNP04198 464 aaPredicted RBP13.91□□□□□ -0.18
SLC6A6-207ENST00000618278 PIP4K2BP78356 416 aa13.91□□□□□ -0.18
SLC6A6-207ENST00000618278 IKQ13123 557 aaPredicted RBP13.91□□□□□ -0.18
SLC6A6-207ENST00000618278 NUTM2AQ8IVF1 878 aaPredicted RBP13.91□□□□□ -0.18
SLC6A6-207ENST00000618278 PLCD3Q8N3E9 789 aa13.91□□□□□ -0.18
SLC6A6-207ENST00000618278 AK7Q96M32 723 aa13.91□□□□□ -0.18
SLC6A6-207ENST00000618278 B4GALNT3Q6L9W6 998 aa13.91□□□□□ -0.18
SLC6A6-207ENST00000618278 PCMTD1Q96MG8 357 aaPredicted RBP13.9□□□□□ -0.18
SLC6A6-207ENST00000618278 GOLGA6L1Q8N7Z2 621 aa13.89□□□□□ -0.19
SLC6A6-207ENST00000618278 TPM3P06753 285 aa13.89□□□□□ -0.19
SLC6A6-207ENST00000618278 ACIN1Q9UKV3 1341 aaKnown RBP13.89□□□□□ -0.19
SLC6A6-207ENST00000618278 HTATSF1O43719 755 aaKnown RBP13.89□□□□□ -0.19
SLC6A6-207ENST00000618278 C1orf141Q5JVX7 400 aa13.89□□□□□ -0.19
SLC6A6-207ENST00000618278 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.88□□□□□ -0.19
SLC6A6-207ENST00000618278 RTN4Q9NQC3 1192 aaKnown RBP13.88□□□□□ -0.19
SLC6A6-207ENST00000618278 ZFYVE27Q5T4F4 411 aa13.88□□□□□ -0.19
SLC6A6-207ENST00000618278 ODF2Q5BJF6 829 aa13.87□□□□□ -0.19
SLC6A6-207ENST00000618278 MSNP26038 577 aaKnown RBP13.87□□□□□ -0.19
SLC6A6-207ENST00000618278 DCAF11Q8TEB1 546 aa13.86□□□□□ -0.19
SLC6A6-207ENST00000618278 ITPRIPQ8IWB1 547 aa13.86□□□□□ -0.19
SLC6A6-207ENST00000618278 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.86□□□□□ -0.19
SLC6A6-207ENST00000618278 APPP05067 770 aa13.86□□□□□ -0.19
SLC6A6-207ENST00000618278 TPM2P07951 284 aa13.86□□□□□ -0.19
SLC6A6-207ENST00000618278 SF3A1Q15459 793 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms