RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 SCAPERQ9BY12 1400 aa36.21■■■■□ 3.39
NEDD4L-237ENST00000617539 HECW2Q9P2P5 1572 aa36.21■■■■□ 3.39
NEDD4L-237ENST00000617539 SIGLEC1Q9BZZ2 1709 aa36.2■■■■□ 3.39
NEDD4L-237ENST00000617539 ZFYVE16Q7Z3T8 1539 aa36.18■■■■□ 3.38
NEDD4L-237ENST00000617539 YEATS2Q9ULM3 1422 aa36.18■■■■□ 3.38
NEDD4L-237ENST00000617539 CDC42BPBQ9Y5S2 1711 aa36.17■■■■□ 3.38
NEDD4L-237ENST00000617539 MADDQ8WXG6 1647 aa36.15■■■■□ 3.38
NEDD4L-237ENST00000617539 ARHGAP5Q13017 1502 aa36.14■■■■□ 3.38
NEDD4L-237ENST00000617539 MAGI2Q86UL8 1455 aa36.14■■■■□ 3.38
NEDD4L-237ENST00000617539 EFCAB2Q5VUJ9 269 aa36.14■■■■□ 3.38
NEDD4L-237ENST00000617539 PTPRMP28827 1452 aa36.12■■■■□ 3.37
NEDD4L-237ENST00000617539 PREX2Q70Z35 1606 aa36.11■■■■□ 3.37
NEDD4L-237ENST00000617539 ARID4BQ4LE39 1312 aaPredicted RBP36.1■■■■□ 3.37
NEDD4L-237ENST00000617539 CDC42BPAQ5VT25 1732 aa36.05■■■■□ 3.36
NEDD4L-237ENST00000617539 KDM5CP41229 1560 aa36.03■■■■□ 3.36
NEDD4L-237ENST00000617539 RIMS1Q86UR5 1692 aaKnown RBP36.02■■■■□ 3.36
NEDD4L-237ENST00000617539 ZNF518AQ6AHZ1 1483 aa36.01■■■■□ 3.36
NEDD4L-237ENST00000617539 ABCC1P33527 1531 aa35.98■■■■□ 3.35
NEDD4L-237ENST00000617539 ARHGEF12Q9NZN5 1544 aa35.96■■■■□ 3.35
NEDD4L-237ENST00000617539 ATP10AO60312 1499 aa35.95■■■■□ 3.35
NEDD4L-237ENST00000617539 AFAP1Q8N556 730 aa35.95■■■■□ 3.35
NEDD4L-237ENST00000617539 ITSN2Q9NZM3 1697 aa35.94■■■■□ 3.34
NEDD4L-237ENST00000617539 CEP162Q5TB80 1403 aa35.94■■■■□ 3.34
NEDD4L-237ENST00000617539 C9orf84Q5VXU9 1444 aa35.91■■■■□ 3.34
NEDD4L-237ENST00000617539 TRAPPC8Q9Y2L5 1435 aa35.89■■■■□ 3.34
NEDD4L-237ENST00000617539 DIP2CQ9Y2E4 1556 aa35.89■■■■□ 3.34
NEDD4L-237ENST00000617539 FER1L4A9Z1Z3 1794 aa35.88■■■■□ 3.33
NEDD4L-237ENST00000617539 GPATCH8Q9UKJ3 1502 aaKnown RBP35.87■■■■□ 3.33
NEDD4L-237ENST00000617539 ABCA6Q8N139 1617 aa35.86■■■■□ 3.33
NEDD4L-237ENST00000617539 SAMD9LQ8IVG5 1584 aa35.85■■■■□ 3.33
NEDD4L-237ENST00000617539 MLH3Q9UHC1 1453 aa35.84■■■■□ 3.33
NEDD4L-237ENST00000617539 MLECQ14165 292 aa35.82■■■■□ 3.32
NEDD4L-237ENST00000617539 REREQ9P2R6 1566 aa35.8■■■■□ 3.32
NEDD4L-237ENST00000617539 KIDINS220Q9ULH0 1771 aa35.79■■■■□ 3.32
NEDD4L-237ENST00000617539 LMTK3Q96Q04 1460 aa35.78■■■■□ 3.32
NEDD4L-237ENST00000617539 MTUS2Q5JR59 1369 aa35.76■■■■□ 3.32
NEDD4L-237ENST00000617539 SYCP2Q9BX26 1530 aa35.76■■■■□ 3.31
NEDD4L-237ENST00000617539 EHBP1L1Q8N3D4 1523 aa35.73■■■■□ 3.31
NEDD4L-237ENST00000617539 TIAM1Q13009 1591 aa35.72■■■■□ 3.31
NEDD4L-237ENST00000617539 MYT1LQ9UL68 1186 aa35.71■■■■□ 3.31
NEDD4L-237ENST00000617539 ZNF777Q9ULD5 760 aaPredicted RBP35.71■■■■□ 3.31
NEDD4L-237ENST00000617539 LOC105371045A0A1W2PR82 267 aa35.7■■■■□ 3.31
NEDD4L-237ENST00000617539 CCNB3Q8WWL7 1395 aa35.7■■■■□ 3.31
NEDD4L-237ENST00000617539 PLPPR3Q6T4P5 718 aa35.67■■■■□ 3.3
NEDD4L-237ENST00000617539 AGLP35573 1532 aa35.66■■■■□ 3.3
NEDD4L-237ENST00000617539 CFDP1Q9UEE9 299 aaPredicted RBP35.64■■■■□ 3.3
NEDD4L-237ENST00000617539 KIAA1107Q9UPP5 1409 aa35.64■■■■□ 3.3
NEDD4L-237ENST00000617539 HNRNPMP52272 730 aaKnown RBP eCLIP35.63■■■■□ 3.295e-6■■□□□ 13.2
NEDD4L-237ENST00000617539 PLEKHH2Q8IVE3 1493 aa35.61■■■■□ 3.29
NEDD4L-237ENST00000617539 INO80Q9ULG1 1556 aaPredicted RBP35.6■■■■□ 3.29
NEDD4L-237ENST00000617539 ATP7AQ04656 1500 aa35.57■■■■□ 3.28
NEDD4L-237ENST00000617539 VPS8Q8N3P4 1428 aa35.55■■■■□ 3.28
NEDD4L-237ENST00000617539 SPAG9O60271 1321 aaKnown RBP35.55■■■■□ 3.28
NEDD4L-237ENST00000617539 SUPT6HQ7KZ85 1726 aaKnown RBP35.54■■■■□ 3.28
NEDD4L-237ENST00000617539 ZNF644Q9H582 1327 aaPredicted RBP35.54■■■■□ 3.28
NEDD4L-237ENST00000617539 CEBPAP49715 358 aaPredicted RBP35.53■■■■□ 3.28
NEDD4L-237ENST00000617539 PREX1Q8TCU6 1659 aa35.52■■■■□ 3.28
NEDD4L-237ENST00000617539 HSPA2P54652 639 aa35.51■■■■□ 3.28
NEDD4L-237ENST00000617539 NCOA2Q15596 1464 aa35.51■■■■□ 3.28
NEDD4L-237ENST00000617539 C3P01024 1663 aa35.51■■■■□ 3.28
NEDD4L-237ENST00000617539 ILDR1Q86SU0 546 aaPredicted RBP35.5■■■■□ 3.27
NEDD4L-237ENST00000617539 MBD5Q9P267 1494 aa35.49■■■■□ 3.27
NEDD4L-237ENST00000617539 PLXNC1O60486 1568 aa35.49■■■■□ 3.27
NEDD4L-237ENST00000617539 A2MP01023 1474 aa35.41■■■■□ 3.26
NEDD4L-237ENST00000617539 LRRC9Q6ZRR7 1453 aa35.41■■■■□ 3.26
NEDD4L-237ENST00000617539 ADGBQ8N7X0 1667 aa35.4■■■■□ 3.26
NEDD4L-237ENST00000617539 CAMSAP2Q08AD1 1489 aa35.38■■■■□ 3.25
NEDD4L-237ENST00000617539 SETD1BQ9UPS6 1966 aaKnown RBP35.36■■■■□ 3.25
NEDD4L-237ENST00000617539 MROH2AA6NES4 1674 aa35.36■■■■□ 3.25
NEDD4L-237ENST00000617539 CNTLNQ9NXG0 1405 aa35.35■■■■□ 3.25
NEDD4L-237ENST00000617539 MAP3K1Q13233 1512 aa35.35■■■■□ 3.25
NEDD4L-237ENST00000617539 RTEL1-TNFRSF6BF6WH68 1400 aa35.32■■■■□ 3.24
NEDD4L-237ENST00000617539 ESF1Q9H501 851 aaKnown RBP35.31■■■■□ 3.24
NEDD4L-237ENST00000617539 UHRF1BP1Q6BDS2 1440 aa35.31■■■■□ 3.24
NEDD4L-237ENST00000617539 CCDC141Q6ZP82 1450 aa35.3■■■■□ 3.24
NEDD4L-237ENST00000617539 CLTCQ00610 1675 aaKnown RBP35.3■■■■□ 3.24
NEDD4L-237ENST00000617539 KANK4Q5T7N3 995 aaPredicted RBP35.28■■■■□ 3.24
NEDD4L-237ENST00000617539 STRCQ7RTU9 1775 aa35.27■■■■□ 3.24
NEDD4L-237ENST00000617539 ARHGEF5Q12774 1597 aa35.25■■■■□ 3.23
NEDD4L-237ENST00000617539 ZMYM3Q14202 1370 aa35.21■■■■□ 3.23
NEDD4L-237ENST00000617539 NPATQ14207 1427 aa35.18■■■■□ 3.22
NEDD4L-237ENST00000617539 DHX29Q7Z478 1369 aaKnown RBP35.18■■■■□ 3.22
NEDD4L-237ENST00000617539 GGT6Q6P531 493 aa35.17■■■■□ 3.22
NEDD4L-237ENST00000617539 RSPH4AQ5TD94 716 aa35.15■■■■□ 3.22
NEDD4L-237ENST00000617539 MYOM3Q5VTT5 1437 aa35.14■■■■□ 3.22
NEDD4L-237ENST00000617539 MAST1Q9Y2H9 1570 aa35.09■■■■□ 3.21
NEDD4L-237ENST00000617539 PTPRKQ15262 1439 aa35.09■■■■□ 3.21
NEDD4L-237ENST00000617539 MIA2Q96PC5 1412 aa35.09■■■■□ 3.21
NEDD4L-237ENST00000617539 FBXO41Q8TF61 875 aa35.09■■■■□ 3.21
NEDD4L-237ENST00000617539 MYO3AQ8NEV4 1616 aa35.08■■■■□ 3.21
NEDD4L-237ENST00000617539 PPP6R1Q9UPN7 881 aa35.07■■■■□ 3.2
NEDD4L-237ENST00000617539 ZNF142P52746 1687 aaPredicted RBP35.05■■■■□ 3.2
NEDD4L-237ENST00000617539 KIF3BO15066 747 aa35.03■■■■□ 3.2
NEDD4L-237ENST00000617539 TSPY4P0CV99 314 aa35.02■■■■□ 3.2
NEDD4L-237ENST00000617539 TSPY10P0CW01 314 aa35.02■■■■□ 3.2
NEDD4L-237ENST00000617539 NCOA1Q15788 1441 aa35.01■■■■□ 3.2
NEDD4L-237ENST00000617539 KDM5DQ9BY66 1539 aa35■■■■□ 3.19
NEDD4L-237ENST00000617539 FAM135AQ9P2D6 1515 aa34.99■■■■□ 3.19
NEDD4L-237ENST00000617539 CAMSAP1Q5T5Y3 1602 aa34.99■■■■□ 3.19
NEDD4L-237ENST00000617539 CEP170BQ9Y4F5 1589 aaPredicted RBP34.97■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms