RNA–Protein interactions for RNA: ENST00000617408.1

PCDHA11-203, Transcript of protocadherin alpha 11, humanhuman

TSL 3

Gene PCDHA11, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-203ENST00000617408 EFCAB2Q5VUJ9 269 aa33.52■■■□□ 2.96
PCDHA11-203ENST00000617408 SCAPERQ9BY12 1400 aa33.5■■■□□ 2.95
PCDHA11-203ENST00000617408 MTUS2Q5JR59 1369 aa33.48■■■□□ 2.95
PCDHA11-203ENST00000617408 CDC42BPAQ5VT25 1732 aa33.48■■■□□ 2.95
PCDHA11-203ENST00000617408 ARHGEF40Q8TER5 1519 aa33.48■■■□□ 2.95
PCDHA11-203ENST00000617408 POGZQ7Z3K3 1410 aa33.47■■■□□ 2.95
PCDHA11-203ENST00000617408 ZMYM4Q5VZL5 1548 aa33.47■■■□□ 2.95
PCDHA11-203ENST00000617408 VPS8Q8N3P4 1428 aa33.46■■■□□ 2.95
PCDHA11-203ENST00000617408 EHBP1L1Q8N3D4 1523 aa33.45■■■□□ 2.95
PCDHA11-203ENST00000617408 ZFYVE16Q7Z3T8 1539 aa33.4■■■□□ 2.94
PCDHA11-203ENST00000617408 ABCC1P33527 1531 aa33.37■■■□□ 2.93
PCDHA11-203ENST00000617408 TIAM1Q13009 1591 aa33.36■■■□□ 2.93
PCDHA11-203ENST00000617408 ZNF518AQ6AHZ1 1483 aa33.36■■■□□ 2.93
PCDHA11-203ENST00000617408 ITSN2Q9NZM3 1697 aa33.34■■■□□ 2.93
PCDHA11-203ENST00000617408 MAGI2Q86UL8 1455 aa33.34■■■□□ 2.93
PCDHA11-203ENST00000617408 YEATS2Q9ULM3 1422 aa33.34■■■□□ 2.93
PCDHA11-203ENST00000617408 GPATCH8Q9UKJ3 1502 aaKnown RBP33.33■■■□□ 2.93
PCDHA11-203ENST00000617408 CCNB3Q8WWL7 1395 aa33.33■■■□□ 2.93
PCDHA11-203ENST00000617408 KDM5CP41229 1560 aa33.3■■■□□ 2.92
PCDHA11-203ENST00000617408 SAMD9LQ8IVG5 1584 aa33.3■■■□□ 2.92
PCDHA11-203ENST00000617408 ARID4BQ4LE39 1312 aaPredicted RBP33.28■■■□□ 2.92
PCDHA11-203ENST00000617408 ZNF777Q9ULD5 760 aaPredicted RBP33.28■■■□□ 2.92
PCDHA11-203ENST00000617408 SUPT6HQ7KZ85 1726 aaKnown RBP33.27■■■□□ 2.92
PCDHA11-203ENST00000617408 HECW2Q9P2P5 1572 aa33.26■■■□□ 2.92
PCDHA11-203ENST00000617408 ARHGEF12Q9NZN5 1544 aa33.26■■■□□ 2.91
PCDHA11-203ENST00000617408 BCORL1Q5H9F3 1711 aa33.25■■■□□ 2.91
PCDHA11-203ENST00000617408 AFAP1Q8N556 730 aa33.24■■■□□ 2.91
PCDHA11-203ENST00000617408 SYCP2Q9BX26 1530 aa33.23■■■□□ 2.91
PCDHA11-203ENST00000617408 SIGLEC1Q9BZZ2 1709 aa33.22■■■□□ 2.91
PCDHA11-203ENST00000617408 TRAPPC8Q9Y2L5 1435 aa33.22■■■□□ 2.91
PCDHA11-203ENST00000617408 CFDP1Q9UEE9 299 aaPredicted RBP33.22■■■□□ 2.91
PCDHA11-203ENST00000617408 ADAMTSL3P82987 1691 aa33.21■■■□□ 2.91
PCDHA11-203ENST00000617408 MYT1LQ9UL68 1186 aa33.21■■■□□ 2.91
PCDHA11-203ENST00000617408 NCOA2Q15596 1464 aa33.19■■■□□ 2.9
PCDHA11-203ENST00000617408 LRRC9Q6ZRR7 1453 aa33.18■■■□□ 2.9
PCDHA11-203ENST00000617408 C9orf84Q5VXU9 1444 aa33.17■■■□□ 2.9
PCDHA11-203ENST00000617408 ATP10AO60312 1499 aa33.16■■■□□ 2.9
PCDHA11-203ENST00000617408 PLEKHH2Q8IVE3 1493 aa33.16■■■□□ 2.9
PCDHA11-203ENST00000617408 MAP3K1Q13233 1512 aa33.16■■■□□ 2.9
PCDHA11-203ENST00000617408 MADDQ8WXG6 1647 aa33.15■■■□□ 2.9
PCDHA11-203ENST00000617408 DIP2CQ9Y2E4 1556 aa33.15■■■□□ 2.9
PCDHA11-203ENST00000617408 ABCA6Q8N139 1617 aa33.14■■■□□ 2.9
PCDHA11-203ENST00000617408 MLH3Q9UHC1 1453 aa33.13■■■□□ 2.89
PCDHA11-203ENST00000617408 KIAA1107Q9UPP5 1409 aa33.1■■■□□ 2.89
PCDHA11-203ENST00000617408 KIDINS220Q9ULH0 1771 aa33.09■■■□□ 2.89
PCDHA11-203ENST00000617408 HNRNPMP52272 730 aaKnown RBP eCLIP33.08■■■□□ 2.89
PCDHA11-203ENST00000617408 RIMS1Q86UR5 1692 aaKnown RBP33.07■■■□□ 2.88
PCDHA11-203ENST00000617408 KANK4Q5T7N3 995 aaPredicted RBP33.05■■■□□ 2.88
PCDHA11-203ENST00000617408 PTPRMP28827 1452 aa33.05■■■□□ 2.88
PCDHA11-203ENST00000617408 APLP2Q06481 763 aa33.04■■■□□ 2.88
PCDHA11-203ENST00000617408 ZNF644Q9H582 1327 aaPredicted RBP33.03■■■□□ 2.88
PCDHA11-203ENST00000617408 REREQ9P2R6 1566 aa33.03■■■□□ 2.88
PCDHA11-203ENST00000617408 MLECQ14165 292 aa33.02■■■□□ 2.88
PCDHA11-203ENST00000617408 CAMSAP2Q08AD1 1489 aa33.01■■■□□ 2.88
PCDHA11-203ENST00000617408 ATP7AQ04656 1500 aa33.01■■■□□ 2.87
PCDHA11-203ENST00000617408 FER1L4A9Z1Z3 1794 aa33.01■■■□□ 2.87
PCDHA11-203ENST00000617408 SPAG9O60271 1321 aaKnown RBP33.01■■■□□ 2.87
PCDHA11-203ENST00000617408 INO80Q9ULG1 1556 aaPredicted RBP33■■■□□ 2.87
PCDHA11-203ENST00000617408 MBD5Q9P267 1494 aa32.95■■■□□ 2.87
PCDHA11-203ENST00000617408 AGLP35573 1532 aa32.91■■■□□ 2.86
PCDHA11-203ENST00000617408 MYOM3Q5VTT5 1437 aa32.9■■■□□ 2.86
PCDHA11-203ENST00000617408 CCDC141Q6ZP82 1450 aa32.89■■■□□ 2.86
PCDHA11-203ENST00000617408 PLPPR3Q6T4P5 718 aa32.86■■■□□ 2.85
PCDHA11-203ENST00000617408 ADGBQ8N7X0 1667 aa32.85■■■□□ 2.85
PCDHA11-203ENST00000617408 ARHGEF5Q12774 1597 aa32.84■■■□□ 2.85
PCDHA11-203ENST00000617408 MIA2Q96PC5 1412 aa32.82■■■□□ 2.84
PCDHA11-203ENST00000617408 PLXNC1O60486 1568 aa32.82■■■□□ 2.84
PCDHA11-203ENST00000617408 A2MP01023 1474 aa32.81■■■□□ 2.84
PCDHA11-203ENST00000617408 RTEL1-TNFRSF6BF6WH68 1400 aa32.8■■■□□ 2.84
PCDHA11-203ENST00000617408 RSPH4AQ5TD94 716 aa32.76■■■□□ 2.83
PCDHA11-203ENST00000617408 PTPN23Q9H3S7 1636 aa32.73■■■□□ 2.83
PCDHA11-203ENST00000617408 ESF1Q9H501 851 aaKnown RBP32.71■■■□□ 2.83
PCDHA11-203ENST00000617408 TSPY4P0CV99 314 aa32.68■■■□□ 2.82
PCDHA11-203ENST00000617408 TSPY10P0CW01 314 aa32.68■■■□□ 2.82
PCDHA11-203ENST00000617408 FGD6Q6ZV73 1430 aa32.68■■■□□ 2.82
PCDHA11-203ENST00000617408 MAST1Q9Y2H9 1570 aa32.67■■■□□ 2.82
PCDHA11-203ENST00000617408 LMTK3Q96Q04 1460 aa32.66■■■□□ 2.82
PCDHA11-203ENST00000617408 C3P01024 1663 aa32.66■■■□□ 2.82
PCDHA11-203ENST00000617408 CEBPAP49715 358 aaPredicted RBP32.65■■■□□ 2.82
PCDHA11-203ENST00000617408 CROCC2H7BZ55 1655 aa32.64■■■□□ 2.82
PCDHA11-203ENST00000617408 CNTLNQ9NXG0 1405 aa32.64■■■□□ 2.82
PCDHA11-203ENST00000617408 DHX29Q7Z478 1369 aaKnown RBP32.63■■■□□ 2.81
PCDHA11-203ENST00000617408 MROH2AA6NES4 1674 aa32.61■■■□□ 2.81
PCDHA11-203ENST00000617408 CLTCQ00610 1675 aaKnown RBP32.61■■■□□ 2.81
PCDHA11-203ENST00000617408 TCOF1Q13428 1488 aaKnown RBP32.61■■■□□ 2.81
PCDHA11-203ENST00000617408 GGT6Q6P531 493 aa32.6■■■□□ 2.81
PCDHA11-203ENST00000617408 PREX1Q8TCU6 1659 aa32.59■■■□□ 2.81
PCDHA11-203ENST00000617408 DNMT1P26358 1616 aaKnown RBP32.58■■■□□ 2.81
PCDHA11-203ENST00000617408 SHANK2Q9UPX8 1470 aa32.55■■■□□ 2.8
PCDHA11-203ENST00000617408 ABCC5O15440 1437 aa32.53■■■□□ 2.8
PCDHA11-203ENST00000617408 DAPK1P53355 1430 aa32.53■■■□□ 2.8
PCDHA11-203ENST00000617408 KIF3BO15066 747 aa32.52■■■□□ 2.8
PCDHA11-203ENST00000617408 ZMYM3Q14202 1370 aa32.47■■■□□ 2.79
PCDHA11-203ENST00000617408 HSPA2P54652 639 aa32.47■■■□□ 2.79
PCDHA11-203ENST00000617408 UHRF1BP1Q6BDS2 1440 aa32.47■■■□□ 2.79
PCDHA11-203ENST00000617408 EIF2AK4Q9P2K8 1649 aaKnown RBP32.47■■■□□ 2.79
PCDHA11-203ENST00000617408 FAM50AQ14320 339 aaKnown RBP32.45■■■□□ 2.79
PCDHA11-203ENST00000617408 KDM5DQ9BY66 1539 aa32.45■■■□□ 2.78
PCDHA11-203ENST00000617408 DUOX2Q9NRD8 1548 aa32.45■■■□□ 2.78
PCDHA11-203ENST00000617408 PPP6R1Q9UPN7 881 aa32.44■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms