RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 SCAPERQ9BY12 1400 aa24.21■■□□□ 1.47
UBXN1-218ENST00000616865 FER1L4A9Z1Z3 1794 aa24.21■■□□□ 1.47
UBXN1-218ENST00000616865 KIF14Q15058 1648 aa24.21■■□□□ 1.47
UBXN1-218ENST00000616865 UBTFP17480 764 aaKnown RBP24.18■■□□□ 1.46
UBXN1-218ENST00000616865 LRRIQ1Q96JM4 1722 aa24.18■■□□□ 1.46
UBXN1-218ENST00000616865 EHMT2Q96KQ7 1210 aa24.17■■□□□ 1.46
UBXN1-218ENST00000616865 FBXO41Q8TF61 875 aa24.16■■□□□ 1.46
UBXN1-218ENST00000616865 ATP1B4Q9UN42 357 aaPredicted RBP24.14■■□□□ 1.45
UBXN1-218ENST00000616865 TROQ12816 1431 aaPredicted RBP24.12■■□□□ 1.45
UBXN1-218ENST00000616865 C9orf84Q5VXU9 1444 aa24.12■■□□□ 1.45
UBXN1-218ENST00000616865 CDK11AQ9UQ88 783 aaPredicted RBP24.12■■□□□ 1.45
UBXN1-218ENST00000616865 ARHGEF12Q9NZN5 1544 aa24.11■■□□□ 1.45
UBXN1-218ENST00000616865 ATP10AO60312 1499 aa24.11■■□□□ 1.45
UBXN1-218ENST00000616865 ARHGAP5Q13017 1502 aa24.1■■□□□ 1.45
UBXN1-218ENST00000616865 EFCAB2Q5VUJ9 269 aa24.1■■□□□ 1.45
UBXN1-218ENST00000616865 ZNF518AQ6AHZ1 1483 aa24.1■■□□□ 1.45
UBXN1-218ENST00000616865 KDM5CP41229 1560 aa24.1■■□□□ 1.45
UBXN1-218ENST00000616865 CLIP1P30622 1438 aa24.09■■□□□ 1.45
UBXN1-218ENST00000616865 MLECQ14165 292 aa24.08■■□□□ 1.45
UBXN1-218ENST00000616865 PLPPR3Q6T4P5 718 aa24.08■■□□□ 1.45
UBXN1-218ENST00000616865 HSPA2P54652 639 aa24.06■■□□□ 1.44
UBXN1-218ENST00000616865 CDC42BPBQ9Y5S2 1711 aa24.06■■□□□ 1.44
UBXN1-218ENST00000616865 PREX1Q8TCU6 1659 aa24.05■■□□□ 1.44
UBXN1-218ENST00000616865 PREX2Q70Z35 1606 aa24.04■■□□□ 1.44
UBXN1-218ENST00000616865 DIP2CQ9Y2E4 1556 aa24.03■■□□□ 1.44
UBXN1-218ENST00000616865 CCDC18Q5T9S5 1454 aa24.01■■□□□ 1.43
UBXN1-218ENST00000616865 REREQ9P2R6 1566 aa24.01■■□□□ 1.43
UBXN1-218ENST00000616865 ABCA6Q8N139 1617 aa24■■□□□ 1.43
UBXN1-218ENST00000616865 ABCC1P33527 1531 aa23.99■■□□□ 1.43
UBXN1-218ENST00000616865 CASKIN1Q8WXD9 1431 aa23.98■■□□□ 1.43
UBXN1-218ENST00000616865 ITSN2Q9NZM3 1697 aa23.98■■□□□ 1.43
UBXN1-218ENST00000616865 AFAP1Q8N556 730 aa23.96■■□□□ 1.43
UBXN1-218ENST00000616865 MLH3Q9UHC1 1453 aa23.95■■□□□ 1.42
UBXN1-218ENST00000616865 CDC42BPAQ5VT25 1732 aa23.95■■□□□ 1.42
UBXN1-218ENST00000616865 FYCO1Q9BQS8 1478 aa23.9■■□□□ 1.42
UBXN1-218ENST00000616865 TRAPPC8Q9Y2L5 1435 aa23.9■■□□□ 1.42
UBXN1-218ENST00000616865 AGLP35573 1532 aa23.89■■□□□ 1.42
UBXN1-218ENST00000616865 C3P01024 1663 aa23.89■■□□□ 1.42
UBXN1-218ENST00000616865 KIDINS220Q9ULH0 1771 aa23.89■■□□□ 1.42
UBXN1-218ENST00000616865 CEBPAP49715 358 aaPredicted RBP23.89■■□□□ 1.41
UBXN1-218ENST00000616865 MYT1LQ9UL68 1186 aa23.89■■□□□ 1.41
UBXN1-218ENST00000616865 UHRF1BP1Q6BDS2 1440 aa23.87■■□□□ 1.41
UBXN1-218ENST00000616865 STRCQ7RTU9 1775 aa23.87■■□□□ 1.41
UBXN1-218ENST00000616865 SETD1BQ9UPS6 1966 aaKnown RBP23.83■■□□□ 1.41
UBXN1-218ENST00000616865 SAMD9LQ8IVG5 1584 aa23.83■■□□□ 1.41
UBXN1-218ENST00000616865 LOC105371045A0A1W2PR82 267 aa23.83■■□□□ 1.41
UBXN1-218ENST00000616865 CERKQ8TCT0 537 aa23.83■■□□□ 1.41
UBXN1-218ENST00000616865 SYCP2Q9BX26 1530 aa23.79■■□□□ 1.4
UBXN1-218ENST00000616865 GPATCH8Q9UKJ3 1502 aaKnown RBP23.76■■□□□ 1.39
UBXN1-218ENST00000616865 MROH2AA6NES4 1674 aa23.76■■□□□ 1.39
UBXN1-218ENST00000616865 CNTLNQ9NXG0 1405 aa23.76■■□□□ 1.39
UBXN1-218ENST00000616865 ESF1Q9H501 851 aaKnown RBP23.74■■□□□ 1.39
UBXN1-218ENST00000616865 DMRT2Q9Y5R5 561 aa23.74■■□□□ 1.39
UBXN1-218ENST00000616865 INO80Q9ULG1 1556 aaPredicted RBP23.73■■□□□ 1.39
UBXN1-218ENST00000616865 ATP7AQ04656 1500 aa23.72■■□□□ 1.39
UBXN1-218ENST00000616865 SUPT6HQ7KZ85 1726 aaKnown RBP23.72■■□□□ 1.39
UBXN1-218ENST00000616865 ZNF777Q9ULD5 760 aaPredicted RBP23.71■■□□□ 1.39
UBXN1-218ENST00000616865 PLXNC1O60486 1568 aa23.7■■□□□ 1.38
UBXN1-218ENST00000616865 PLEKHH2Q8IVE3 1493 aa23.69■■□□□ 1.38
UBXN1-218ENST00000616865 PTPRTO14522 1441 aa23.69■■□□□ 1.38
UBXN1-218ENST00000616865 KIAA1107Q9UPP5 1409 aa23.69■■□□□ 1.38
UBXN1-218ENST00000616865 SPAG9O60271 1321 aaKnown RBP23.67■■□□□ 1.38
UBXN1-218ENST00000616865 NPATQ14207 1427 aa23.66■■□□□ 1.38
UBXN1-218ENST00000616865 CLTCQ00610 1675 aaKnown RBP23.65■■□□□ 1.38
UBXN1-218ENST00000616865 HNRNPMP52272 730 aaKnown RBP eCLIP23.65■■□□□ 1.38
UBXN1-218ENST00000616865 CCNB3Q8WWL7 1395 aa23.65■■□□□ 1.38
UBXN1-218ENST00000616865 NCOA1Q15788 1441 aa23.64■■□□□ 1.37
UBXN1-218ENST00000616865 TIAM1Q13009 1591 aa23.63■■□□□ 1.37
UBXN1-218ENST00000616865 MTUS2Q5JR59 1369 aa23.63■■□□□ 1.37
UBXN1-218ENST00000616865 A2MP01023 1474 aa23.62■■□□□ 1.37
UBXN1-218ENST00000616865 CFDP1Q9UEE9 299 aaPredicted RBP23.62■■□□□ 1.37
UBXN1-218ENST00000616865 ADGBQ8N7X0 1667 aa23.62■■□□□ 1.37
UBXN1-218ENST00000616865 EHBP1L1Q8N3D4 1523 aa23.62■■□□□ 1.37
UBXN1-218ENST00000616865 ZNF142P52746 1687 aaPredicted RBP23.61■■□□□ 1.37
UBXN1-218ENST00000616865 CAMSAP1Q5T5Y3 1602 aa23.61■■□□□ 1.37
UBXN1-218ENST00000616865 MYO3AQ8NEV4 1616 aa23.61■■□□□ 1.37
UBXN1-218ENST00000616865 LTBP4Q8N2S1 1624 aa23.6■■□□□ 1.37
UBXN1-218ENST00000616865 ZMYM3Q14202 1370 aa23.6■■□□□ 1.37
UBXN1-218ENST00000616865 CEP162Q5TB80 1403 aa23.58■■□□□ 1.36
UBXN1-218ENST00000616865 IQSEC2Q5JU85 1478 aa23.55■■□□□ 1.36
UBXN1-218ENST00000616865 CEP170BQ9Y4F5 1589 aaPredicted RBP23.54■■□□□ 1.36
UBXN1-218ENST00000616865 MBD5Q9P267 1494 aa23.53■■□□□ 1.36
UBXN1-218ENST00000616865 PTPRKQ15262 1439 aa23.52■■□□□ 1.36
UBXN1-218ENST00000616865 PLA2R1Q13018 1463 aa23.51■■□□□ 1.35
UBXN1-218ENST00000616865 ZNF644Q9H582 1327 aaPredicted RBP23.5■■□□□ 1.35
UBXN1-218ENST00000616865 RTEL1-TNFRSF6BF6WH68 1400 aa23.49■■□□□ 1.35
UBXN1-218ENST00000616865 GGT6Q6P531 493 aa23.48■■□□□ 1.35
UBXN1-218ENST00000616865 TCOF1Q13428 1488 aaKnown RBP23.46■■□□□ 1.35
UBXN1-218ENST00000616865 PPP6R1Q9UPN7 881 aa23.45■■□□□ 1.34
UBXN1-218ENST00000616865 CCDC141Q6ZP82 1450 aa23.43■■□□□ 1.34
UBXN1-218ENST00000616865 NCKAP5LQ9HCH0 1330 aa23.43■■□□□ 1.34
UBXN1-218ENST00000616865 CAMSAP2Q08AD1 1489 aa23.43■■□□□ 1.34
UBXN1-218ENST00000616865 NCOA2Q15596 1464 aa23.43■■□□□ 1.34
UBXN1-218ENST00000616865 DISP3Q9P2K9 1392 aa23.42■■□□□ 1.34
UBXN1-218ENST00000616865 SPATA31D1Q6ZQQ2 1576 aa23.42■■□□□ 1.34
UBXN1-218ENST00000616865 DHX29Q7Z478 1369 aaKnown RBP23.41■■□□□ 1.34
UBXN1-218ENST00000616865 FAM135AQ9P2D6 1515 aa23.41■■□□□ 1.34
UBXN1-218ENST00000616865 DNMT1P26358 1616 aaKnown RBP23.41■■□□□ 1.34
UBXN1-218ENST00000616865 PKD2Q13563 968 aa23.4■■□□□ 1.34
UBXN1-218ENST00000616865 A2ML1A8K2U0 1454 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms