RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 SETD5Q9C0A6 1442 aa22.64■■□□□ 1.21
ATXN2-227ENST00000616825 SOGA1O94964 1423 aa22.63■■□□□ 1.21
ATXN2-227ENST00000616825 EIF4G1Q04637 1599 aaKnown RBP22.63■■□□□ 1.21
ATXN2-227ENST00000616825 GOLGA6L4A6NEF3 574 aa22.63■■□□□ 1.21
ATXN2-227ENST00000616825 NOP58Q9Y2X3 529 aaKnown RBP22.62■■□□□ 1.21
ATXN2-227ENST00000616825 CECR2Q9BXF3 1484 aa22.62■■□□□ 1.21
ATXN2-227ENST00000616825 NRDCO43847 1150 aa22.61■■□□□ 1.21
ATXN2-227ENST00000616825 IPO8O15397 1037 aaKnown RBP22.6■■□□□ 1.21
ATXN2-227ENST00000616825 CARMIL2Q6F5E8 1435 aa22.6■■□□□ 1.21
ATXN2-227ENST00000616825 HSCBQ8IWL3 235 aa22.59■■□□□ 1.21
ATXN2-227ENST00000616825 CFAP44Q96MT7 982 aa22.59■■□□□ 1.21
ATXN2-227ENST00000616825 VPS8Q8N3P4 1428 aa22.57■■□□□ 1.2
ATXN2-227ENST00000616825 MCCP23508 829 aa22.57■■□□□ 1.2
ATXN2-227ENST00000616825 KTN1Q86UP2 1357 aaKnown RBP22.57■■□□□ 1.2
ATXN2-227ENST00000616825 U2AF1L5P0DN76 240 aaPredicted RBP22.57■■□□□ 1.2
ATXN2-227ENST00000616825 U2AF1Q01081 240 aaKnown RBP eCLIP22.57■■□□□ 1.2
ATXN2-227ENST00000616825 FOXD1Q16676 465 aa22.56■■□□□ 1.2
ATXN2-227ENST00000616825 KANK4Q5T7N3 995 aaPredicted RBP22.55■■□□□ 1.2
ATXN2-227ENST00000616825 ARHGAP35Q9NRY4 1499 aa22.55■■□□□ 1.2
ATXN2-227ENST00000616825 NUP155O75694 1391 aa22.54■■□□□ 1.2
ATXN2-227ENST00000616825 GOLGA6L6A8MZA4 724 aa22.54■■□□□ 1.2
ATXN2-227ENST00000616825 CALD1Q05682 793 aaKnown RBP22.54■■□□□ 1.2
ATXN2-227ENST00000616825 MPHOSPH9Q99550 1183 aa22.53■■□□□ 1.2
ATXN2-227ENST00000616825 CHMP4AQ9BY43 222 aa22.52■■□□□ 1.2
ATXN2-227ENST00000616825 PAK3O75914 559 aaPredicted RBP22.49■■□□□ 1.19
ATXN2-227ENST00000616825 RALBP1Q15311 655 aa22.49■■□□□ 1.19
ATXN2-227ENST00000616825 TDRD9Q8NDG6 1382 aaKnown RBP22.49■■□□□ 1.19
ATXN2-227ENST00000616825 ANKRD30AQ9BXX3 1397 aa22.48■■□□□ 1.19
ATXN2-227ENST00000616825 APBB1O00213 710 aa22.47■■□□□ 1.19
ATXN2-227ENST00000616825 KIAA1211Q6ZU35 1233 aa22.47■■□□□ 1.19
ATXN2-227ENST00000616825 KIF3BO15066 747 aa22.47■■□□□ 1.19
ATXN2-227ENST00000616825 FMN1Q68DA7 1419 aa22.46■■□□□ 1.19
ATXN2-227ENST00000616825 RCAN3Q9UKA8 241 aa22.46■■□□□ 1.19
ATXN2-227ENST00000616825 PDS5BQ9NTI5 1447 aa22.45■■□□□ 1.19
ATXN2-227ENST00000616825 ROCK2O75116 1388 aaKnown RBP22.45■■□□□ 1.19
ATXN2-227ENST00000616825 CSB-PGBD3P0DP91 1061 aa22.45■■□□□ 1.19
ATXN2-227ENST00000616825 NAP1L5Q96NT1 182 aaPredicted RBP22.45■■□□□ 1.18
ATXN2-227ENST00000616825 RWDD1Q9H446 243 aaPredicted RBP22.43■■□□□ 1.18
ATXN2-227ENST00000616825 RSPH4AQ5TD94 716 aa22.41■■□□□ 1.18
ATXN2-227ENST00000616825 TERF2IPQ9NYB0 399 aa22.41■■□□□ 1.18
ATXN2-227ENST00000616825 RAB3GAP2Q9H2M9 1393 aa22.41■■□□□ 1.18
ATXN2-227ENST00000616825 STK31Q9BXU1 1019 aa22.4■■□□□ 1.18
ATXN2-227ENST00000616825 ISY1Q9ULR0 285 aaKnown RBP22.39■■□□□ 1.17
ATXN2-227ENST00000616825 ZNF330Q9Y3S2 320 aaPredicted RBP22.39■■□□□ 1.17
ATXN2-227ENST00000616825 ITPRIPQ8IWB1 547 aa22.38■■□□□ 1.17
ATXN2-227ENST00000616825 HDAC5Q9UQL6 1122 aa22.38■■□□□ 1.17
ATXN2-227ENST00000616825 SPRYD3Q8NCJ5 442 aa22.37■■□□□ 1.17
ATXN2-227ENST00000616825 L3MBTL2Q969R5 705 aa22.37■■□□□ 1.17
ATXN2-227ENST00000616825 SPAG9O60271 1321 aaKnown RBP22.36■■□□□ 1.17
ATXN2-227ENST00000616825 CHAF1AQ13111 956 aaPredicted RBP22.35■■□□□ 1.17
ATXN2-227ENST00000616825 GNL2Q13823 731 aaKnown RBP22.35■■□□□ 1.17
ATXN2-227ENST00000616825 L1TD1Q5T7N2 865 aaKnown RBP22.35■■□□□ 1.17
ATXN2-227ENST00000616825 NLRP13Q86W25 1043 aa22.34■■□□□ 1.17
ATXN2-227ENST00000616825 EIF3AQ14152 1382 aaKnown RBP22.34■■□□□ 1.17
ATXN2-227ENST00000616825 RTN4Q9NQC3 1192 aaKnown RBP22.34■■□□□ 1.17
ATXN2-227ENST00000616825 CCDC88BA6NC98 1476 aa22.33■■□□□ 1.17
ATXN2-227ENST00000616825 EID1Q9Y6B2 187 aa22.33■■□□□ 1.16
ATXN2-227ENST00000616825 HNRNPMP52272 730 aaKnown RBP eCLIP22.33■■□□□ 1.161e-6■■□□□ 14.5
ATXN2-227ENST00000616825 TCERG1O14776 1098 aaKnown RBP22.32■■□□□ 1.16
ATXN2-227ENST00000616825 WASHC2CQ9Y4E1 1318 aa22.32■■□□□ 1.16
ATXN2-227ENST00000616825 RBM19Q9Y4C8 960 aaKnown RBP22.31■■□□□ 1.16
ATXN2-227ENST00000616825 NGDNQ8NEJ9 315 aaKnown RBP22.31■■□□□ 1.16
ATXN2-227ENST00000616825 SMC4Q9NTJ3 1288 aa22.31■■□□□ 1.16
ATXN2-227ENST00000616825 HMMRO75330 724 aa22.3■■□□□ 1.16
ATXN2-227ENST00000616825 GBP4Q96PP9 640 aa22.3■■□□□ 1.16
ATXN2-227ENST00000616825 TSHZ2Q9NRE2 1034 aa22.3■■□□□ 1.16
ATXN2-227ENST00000616825 MSNP26038 577 aaKnown RBP22.29■■□□□ 1.16
ATXN2-227ENST00000616825 GORABQ5T7V8 394 aa22.29■■□□□ 1.16
ATXN2-227ENST00000616825 PMFBP1Q8TBY8 1022 aa22.29■■□□□ 1.16
ATXN2-227ENST00000616825 DRC7Q8IY82 874 aa22.28■■□□□ 1.16
ATXN2-227ENST00000616825 PDE3BQ13370 1112 aa22.26■■□□□ 1.15
ATXN2-227ENST00000616825 JPH4Q96JJ6 628 aa22.26■■□□□ 1.15
ATXN2-227ENST00000616825 LMOD3Q0VAK6 560 aa22.26■■□□□ 1.15
ATXN2-227ENST00000616825 CLUAP1Q96AJ1 413 aa22.25■■□□□ 1.15
ATXN2-227ENST00000616825 HTATSF1O43719 755 aaKnown RBP22.25■■□□□ 1.15
ATXN2-227ENST00000616825 AMPHP49418 695 aa22.24■■□□□ 1.15
ATXN2-227ENST00000616825 SLKQ9H2G2 1235 aaPredicted RBP22.23■■□□□ 1.15
ATXN2-227ENST00000616825 MROH2BQ7Z745 1585 aa22.23■■□□□ 1.15
ATXN2-227ENST00000616825 TAF7LQ5H9L4 462 aa22.23■■□□□ 1.15
ATXN2-227ENST00000616825 CLSTN1O94985 981 aa22.22■■□□□ 1.15
ATXN2-227ENST00000616825 PTMSP20962 102 aa22.22■■□□□ 1.15
ATXN2-227ENST00000616825 CHMP3Q9Y3E7 222 aa22.21■■□□□ 1.15
ATXN2-227ENST00000616825 SLC4A10Q6U841 1118 aa22.21■■□□□ 1.15
ATXN2-227ENST00000616825 GPATCH3Q96I76 525 aa22.21■■□□□ 1.15
ATXN2-227ENST00000616825 SMARCA2P51531 1590 aa22.21■■□□□ 1.15
ATXN2-227ENST00000616825 TMX4Q9H1E5 349 aaPredicted RBP22.2■■□□□ 1.14
ATXN2-227ENST00000616825 CCDC9Q9Y3X0 531 aaKnown RBP22.2■■□□□ 1.14
ATXN2-227ENST00000616825 NUTM2DQ5VT03 806 aaPredicted RBP22.2■■□□□ 1.14
ATXN2-227ENST00000616825 TRAK1Q9UPV9 953 aa22.2■■□□□ 1.14
ATXN2-227ENST00000616825 ABCC8Q09428 1581 aa22.2■■□□□ 1.14
ATXN2-227ENST00000616825 CENPJQ9HC77 1338 aaPredicted RBP22.19■■□□□ 1.14
ATXN2-227ENST00000616825 TRIM6-TRIM34B2RNG4 842 aa22.18■■□□□ 1.14
ATXN2-227ENST00000616825 CCDC146Q8IYE0 955 aa22.17■■□□□ 1.14
ATXN2-227ENST00000616825 NUTM2FA1L443 756 aa22.17■■□□□ 1.14
ATXN2-227ENST00000616825 CADPSQ9ULU8 1353 aa22.16■■□□□ 1.14
ATXN2-227ENST00000616825 CCDC34Q96HJ3 373 aa22.16■■□□□ 1.14
ATXN2-227ENST00000616825 MFAP1P55081 439 aaKnown RBP22.16■■□□□ 1.14
ATXN2-227ENST00000616825 SYAP1Q96A49 352 aaPredicted RBP22.16■■□□□ 1.14
ATXN2-227ENST00000616825 LTV1Q96GA3 475 aaPredicted RBP22.16■■□□□ 1.14
ATXN2-227ENST00000616825 CCDC18Q5T9S5 1454 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms