RNA–Protein interactions for RNA: ENST00000616803.4

CBWD1-224, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-224ENST00000616803 DNAJC5Q9H3Z4 198 aa10.16□□□□□ -0.78
CBWD1-224ENST00000616803 GTPBP6O43824 516 aaPredicted RBP10.12□□□□□ -0.79
CBWD1-224ENST00000616803 MMRN1Q13201 1228 aa10.11□□□□□ -0.79
CBWD1-224ENST00000616803 SPNS2Q8IVW8 549 aa10.11□□□□□ -0.79
CBWD1-224ENST00000616803 HOXB3P14651 431 aaPredicted RBP10.09□□□□□ -0.79
CBWD1-224ENST00000616803 EMP3P54852 163 aa10.08□□□□□ -0.8
CBWD1-224ENST00000616803 G3V3G9 751 aa10.06□□□□□ -0.8
CBWD1-224ENST00000616803 KIF3CO14782 793 aa10.05□□□□□ -0.8
CBWD1-224ENST00000616803 C2orf72A6NCS6 295 aa10.04□□□□□ -0.8
CBWD1-224ENST00000616803 FAM205CA6NFA0 338 aa10.01□□□□□ -0.81
CBWD1-224ENST00000616803 HS3ST6Q96QI5 342 aa10□□□□□ -0.81
CBWD1-224ENST00000616803 POTEB3A0JP26 581 aa9.99□□□□□ -0.81
CBWD1-224ENST00000616803 POTEBQ6S5H4 581 aa9.99□□□□□ -0.81
CBWD1-224ENST00000616803 CADPS2Q86UW7 1296 aa9.99□□□□□ -0.81
CBWD1-224ENST00000616803 KHSRPQ92945 711 aaKnown RBP eCLIP9.96□□□□□ -0.82
CBWD1-224ENST00000616803 BBXQ8WY36 941 aaPredicted RBP9.95□□□□□ -0.82
CBWD1-224ENST00000616803 KRTAP3-3Q9BYR6 98 aa9.94□□□□□ -0.82
CBWD1-224ENST00000616803 KRTAP3-2Q9BYR7 98 aa9.94□□□□□ -0.82
CBWD1-224ENST00000616803 NCKAP5LQ9HCH0 1330 aa9.93□□□□□ -0.82
CBWD1-224ENST00000616803 ZNF710Q8N1W2 664 aa9.93□□□□□ -0.82
CBWD1-224ENST00000616803 DSG2Q14126 1118 aa9.91□□□□□ -0.82
CBWD1-224ENST00000616803 GPR153Q6NV75 609 aa9.91□□□□□ -0.82
CBWD1-224ENST00000616803 GPHNQ9NQX3 736 aaPredicted RBP9.9□□□□□ -0.82
CBWD1-224ENST00000616803 ARSIQ5FYB1 569 aa9.89□□□□□ -0.83
CBWD1-224ENST00000616803 CRISPLD2Q9H0B8 497 aa9.89□□□□□ -0.83
CBWD1-224ENST00000616803 DOK7Q18PE1 504 aa9.88□□□□□ -0.83
CBWD1-224ENST00000616803 TMC2Q8TDI7 906 aa9.88□□□□□ -0.83
CBWD1-224ENST00000616803 HOXB1P14653 301 aaPredicted RBP9.87□□□□□ -0.83
CBWD1-224ENST00000616803 PLPP6Q8IY26 295 aa9.86□□□□□ -0.83
CBWD1-224ENST00000616803 ERBB3P21860 1342 aa9.85□□□□□ -0.83
CBWD1-224ENST00000616803 FOXK1P85037 733 aa9.85□□□□□ -0.83
CBWD1-224ENST00000616803 PAXIP1Q6ZW49 1069 aaPredicted RBP9.85□□□□□ -0.83
CBWD1-224ENST00000616803 RIMBP2O15034 1052 aa9.84□□□□□ -0.83
CBWD1-224ENST00000616803 CFAP44Q96MT7 982 aa9.84□□□□□ -0.83
CBWD1-224ENST00000616803 SPRYD3Q8NCJ5 442 aa9.83□□□□□ -0.84
CBWD1-224ENST00000616803 RYDENQ9NUL5 291 aaKnown RBP9.82□□□□□ -0.84
CBWD1-224ENST00000616803 VARS2Q5ST30 1063 aaKnown RBP9.81□□□□□ -0.84
CBWD1-224ENST00000616803 LARP6Q9BRS8 491 aaKnown RBP9.81□□□□□ -0.84
CBWD1-224ENST00000616803 PCDHGA4Q9Y5G9 962 aa9.81□□□□□ -0.84
CBWD1-224ENST00000616803 KDM4FA0A1W2PPD8 638 aa9.8□□□□□ -0.84
CBWD1-224ENST00000616803 SLC34A2O95436 690 aa9.79□□□□□ -0.84
CBWD1-224ENST00000616803 NUDT7P0C024 238 aa9.79□□□□□ -0.84
CBWD1-224ENST00000616803 PDE4AP27815 886 aa9.77□□□□□ -0.85
CBWD1-224ENST00000616803 PPP1R15BQ5SWA1 713 aa9.77□□□□□ -0.85
CBWD1-224ENST00000616803 MFSD10Q14728 455 aa9.76□□□□□ -0.85
CBWD1-224ENST00000616803 PTCD2Q8WV60 388 aaKnown RBP9.76□□□□□ -0.85
CBWD1-224ENST00000616803 ZSWIM6Q9HCJ5 1215 aa9.76□□□□□ -0.85
CBWD1-224ENST00000616803 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.76□□□□□ -0.85
CBWD1-224ENST00000616803 UPF1Q92900 1129 aaKnown RBP eCLIP9.75□□□□□ -0.85
CBWD1-224ENST00000616803 TSHZ2Q9NRE2 1034 aa9.75□□□□□ -0.85
CBWD1-224ENST00000616803 EMILIN3Q9NT22 766 aa9.75□□□□□ -0.85
CBWD1-224ENST00000616803 LHX6Q9UPM6 363 aa9.74□□□□□ -0.85
CBWD1-224ENST00000616803 OXER1Q8TDS5 423 aa9.73□□□□□ -0.85
CBWD1-224ENST00000616803 POTEEQ6S8J3 1075 aa9.72□□□□□ -0.85
CBWD1-224ENST00000616803 ZNF316A6NFI3 1004 aaPredicted RBP9.71□□□□□ -0.86
CBWD1-224ENST00000616803 DDX27Q96GQ7 796 aaKnown RBP9.71□□□□□ -0.86
CBWD1-224ENST00000616803 RNF166Q96A37 237 aaPredicted RBP9.69□□□□□ -0.86
CBWD1-224ENST00000616803 ZNF687Q8N1G0 1237 aa9.67□□□□□ -0.86
CBWD1-224ENST00000616803 MYT1LQ9UL68 1186 aa9.66□□□□□ -0.86
CBWD1-224ENST00000616803 CAMK2BQ13554 666 aa9.64□□□□□ -0.87
CBWD1-224ENST00000616803 AXIN2Q9Y2T1 843 aa9.64□□□□□ -0.87
CBWD1-224ENST00000616803 ANKRD13DQ6ZTN6 518 aa9.61□□□□□ -0.87
CBWD1-224ENST00000616803 ANO8Q9HCE9 1232 aaPredicted RBP9.6□□□□□ -0.87
CBWD1-224ENST00000616803 DPYSL4O14531 572 aa9.59□□□□□ -0.87
CBWD1-224ENST00000616803 EVI5O60447 810 aa9.59□□□□□ -0.87
CBWD1-224ENST00000616803 PLCB2Q00722 1185 aa9.58□□□□□ -0.88
CBWD1-224ENST00000616803 PSEN2P49810 448 aa9.56□□□□□ -0.88
CBWD1-224ENST00000616803 MAP3K9P80192 1104 aa9.56□□□□□ -0.88
CBWD1-224ENST00000616803 TBC1D12O60347 775 aa9.55□□□□□ -0.88
CBWD1-224ENST00000616803 LSM11P83369 360 aaKnown RBP eCLIP9.55□□□□□ -0.88
CBWD1-224ENST00000616803 DMRTA1Q5VZB9 504 aa9.54□□□□□ -0.88
CBWD1-224ENST00000616803 PTGER2P43116 358 aa9.53□□□□□ -0.88
CBWD1-224ENST00000616803 FOSBP53539 338 aa9.53□□□□□ -0.88
CBWD1-224ENST00000616803 ZNF454Q8N9F8 522 aa9.52□□□□□ -0.89
CBWD1-224ENST00000616803 E2F4Q16254 413 aa9.51□□□□□ -0.89
CBWD1-224ENST00000616803 PCDHGA10Q9Y5H3 936 aa9.51□□□□□ -0.89
CBWD1-224ENST00000616803 PRIM1P49642 420 aaKnown RBP9.5□□□□□ -0.89
CBWD1-224ENST00000616803 ADAM33Q9BZ11 813 aa9.5□□□□□ -0.89
CBWD1-224ENST00000616803 KDM2AQ9Y2K7 1162 aa9.5□□□□□ -0.89
CBWD1-224ENST00000616803 PBX2P40425 430 aa9.47□□□□□ -0.89
CBWD1-224ENST00000616803 DDX12PQ92771 950 aa9.47□□□□□ -0.89
CBWD1-224ENST00000616803 ARHGAP33O14559 1287 aa9.46□□□□□ -0.9
CBWD1-224ENST00000616803 PPP4R3BQ5MIZ7 849 aa9.46□□□□□ -0.9
CBWD1-224ENST00000616803 KCNV2Q8TDN2 545 aa9.46□□□□□ -0.9
CBWD1-224ENST00000616803 WDR70Q9NW82 654 aa9.46□□□□□ -0.9
CBWD1-224ENST00000616803 JPH4Q96JJ6 628 aa9.45□□□□□ -0.9
CBWD1-224ENST00000616803 PDIA6Q15084 440 aa9.44□□□□□ -0.9
CBWD1-224ENST00000616803 KCNK17Q96T54 332 aa9.44□□□□□ -0.9
CBWD1-224ENST00000616803 ARIH1Q9Y4X5 557 aaPredicted RBP9.44□□□□□ -0.9
CBWD1-224ENST00000616803 COL9A1P20849 921 aa9.43□□□□□ -0.9
CBWD1-224ENST00000616803 HAP1P54257 671 aaPredicted RBP9.43□□□□□ -0.9
CBWD1-224ENST00000616803 PSDA5PKW4 1024 aaPredicted RBP9.42□□□□□ -0.9
CBWD1-224ENST00000616803 ZDHHC16Q969W1 377 aa9.42□□□□□ -0.9
CBWD1-224ENST00000616803 BCL2L12Q9HB09 334 aa9.42□□□□□ -0.9
CBWD1-224ENST00000616803 ADGRD1Q6QNK2 874 aa9.4□□□□□ -0.9
CBWD1-224ENST00000616803 RBM33Q96EV2 1170 aaKnown RBP9.4□□□□□ -0.9
CBWD1-224ENST00000616803 HRO43593 1189 aa9.39□□□□□ -0.91
CBWD1-224ENST00000616803 PHF14O94880 888 aa9.39□□□□□ -0.91
CBWD1-224ENST00000616803 MLLT3P42568 568 aaPredicted RBP9.38□□□□□ -0.91
CBWD1-224ENST00000616803 TSR1Q2NL82 804 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms