RNA–Protein interactions for RNA: ENST00000616596.4

RDM1-220, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best) BASIC

Gene RDM1, Length 1,032 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-220ENST00000616596 FANCAO15360 1455 aa24.4■■□□□ 1.5
RDM1-220ENST00000616596 NEO1Q92859 1461 aa24.39■■□□□ 1.5
RDM1-220ENST00000616596 KDM6BO15054 1643 aa24.38■■□□□ 1.49
RDM1-220ENST00000616596 CCNB3Q8WWL7 1395 aa24.38■■□□□ 1.49
RDM1-220ENST00000616596 COL17A1Q9UMD9 1497 aaPredicted RBP24.34■■□□□ 1.49
RDM1-220ENST00000616596 AKNAQ7Z591 1439 aa24.34■■□□□ 1.49
RDM1-220ENST00000616596 SAMD9LQ8IVG5 1584 aa24.33■■□□□ 1.49
RDM1-220ENST00000616596 EFCAB2Q5VUJ9 269 aa24.32■■□□□ 1.48
RDM1-220ENST00000616596 PHLDB1Q86UU1 1377 aa24.31■■□□□ 1.48
RDM1-220ENST00000616596 RICTORQ6R327 1708 aa24.3■■□□□ 1.48
RDM1-220ENST00000616596 PPARGC1BQ86YN6 1023 aaKnown RBP24.3■■□□□ 1.48
RDM1-220ENST00000616596 ABCC1P33527 1531 aa24.29■■□□□ 1.48
RDM1-220ENST00000616596 ADGRL1O94910 1474 aa24.28■■□□□ 1.48
RDM1-220ENST00000616596 FRMPD1Q5SYB0 1578 aa24.28■■□□□ 1.48
RDM1-220ENST00000616596 MYOM3Q5VTT5 1437 aa24.27■■□□□ 1.48
RDM1-220ENST00000616596 CFDP1Q9UEE9 299 aaPredicted RBP24.27■■□□□ 1.48
RDM1-220ENST00000616596 ARHGEF12Q9NZN5 1544 aa24.24■■□□□ 1.47
RDM1-220ENST00000616596 SCAPERQ9BY12 1400 aa24.23■■□□□ 1.47
RDM1-220ENST00000616596 SYCP2Q9BX26 1530 aa24.22■■□□□ 1.47
RDM1-220ENST00000616596 ZNF777Q9ULD5 760 aaPredicted RBP24.22■■□□□ 1.47
RDM1-220ENST00000616596 DENND4BO75064 1496 aaPredicted RBP24.21■■□□□ 1.47
RDM1-220ENST00000616596 CAMSAP2Q08AD1 1489 aa24.21■■□□□ 1.47
RDM1-220ENST00000616596 MIA2Q96PC5 1412 aa24.21■■□□□ 1.47
RDM1-220ENST00000616596 PTPN23Q9H3S7 1636 aa24.21■■□□□ 1.47
RDM1-220ENST00000616596 ZNF644Q9H582 1327 aaPredicted RBP24.2■■□□□ 1.46
RDM1-220ENST00000616596 FGD6Q6ZV73 1430 aa24.18■■□□□ 1.46
RDM1-220ENST00000616596 POGZQ7Z3K3 1410 aa24.18■■□□□ 1.46
RDM1-220ENST00000616596 RAPGEF3O95398 923 aa24.18■■□□□ 1.46
RDM1-220ENST00000616596 PLEKHH2Q8IVE3 1493 aa24.18■■□□□ 1.46
RDM1-220ENST00000616596 KIAA1107Q9UPP5 1409 aa24.16■■□□□ 1.46
RDM1-220ENST00000616596 TRAPPC8Q9Y2L5 1435 aa24.16■■□□□ 1.46
RDM1-220ENST00000616596 KDM5CP41229 1560 aa24.15■■□□□ 1.46
RDM1-220ENST00000616596 ZMYM4Q5VZL5 1548 aa24.15■■□□□ 1.46
RDM1-220ENST00000616596 TCOF1Q13428 1488 aaKnown RBP24.13■■□□□ 1.45
RDM1-220ENST00000616596 ZNF518AQ6AHZ1 1483 aa24.13■■□□□ 1.45
RDM1-220ENST00000616596 MBD5Q9P267 1494 aa24.13■■□□□ 1.45
RDM1-220ENST00000616596 HNRNPMP52272 730 aaKnown RBP eCLIP24.13■■□□□ 1.45
RDM1-220ENST00000616596 ARHGEF5Q12774 1597 aa24.12■■□□□ 1.45
RDM1-220ENST00000616596 AFAP1Q8N556 730 aa24.09■■□□□ 1.45
RDM1-220ENST00000616596 HECW2Q9P2P5 1572 aa24.08■■□□□ 1.45
RDM1-220ENST00000616596 KIDINS220Q9ULH0 1771 aa24.07■■□□□ 1.44
RDM1-220ENST00000616596 CROCC2H7BZ55 1655 aa24.07■■□□□ 1.44
RDM1-220ENST00000616596 CCDC141Q6ZP82 1450 aa24.06■■□□□ 1.44
RDM1-220ENST00000616596 INO80Q9ULG1 1556 aaPredicted RBP24.05■■□□□ 1.44
RDM1-220ENST00000616596 DNMT1P26358 1616 aaKnown RBP24.05■■□□□ 1.44
RDM1-220ENST00000616596 ARHGEF40Q8TER5 1519 aa24.05■■□□□ 1.44
RDM1-220ENST00000616596 MAGI2Q86UL8 1455 aa24.03■■□□□ 1.44
RDM1-220ENST00000616596 MLH3Q9UHC1 1453 aa24.03■■□□□ 1.44
RDM1-220ENST00000616596 ZFYVE16Q7Z3T8 1539 aa24.03■■□□□ 1.44
RDM1-220ENST00000616596 ABCA6Q8N139 1617 aa24.02■■□□□ 1.44
RDM1-220ENST00000616596 YEATS2Q9ULM3 1422 aa24.01■■□□□ 1.43
RDM1-220ENST00000616596 RRBP1Q9P2E9 1410 aaKnown RBP24.01■■□□□ 1.43
RDM1-220ENST00000616596 ATP7AQ04656 1500 aa24■■□□□ 1.43
RDM1-220ENST00000616596 DIP2CQ9Y2E4 1556 aa23.99■■□□□ 1.43
RDM1-220ENST00000616596 MAST1Q9Y2H9 1570 aa23.99■■□□□ 1.43
RDM1-220ENST00000616596 RSPH4AQ5TD94 716 aa23.98■■□□□ 1.43
RDM1-220ENST00000616596 SIGLEC1Q9BZZ2 1709 aa23.98■■□□□ 1.43
RDM1-220ENST00000616596 ABCC5O15440 1437 aa23.97■■□□□ 1.43
RDM1-220ENST00000616596 SPAG9O60271 1321 aaKnown RBP23.97■■□□□ 1.43
RDM1-220ENST00000616596 DAPK1P53355 1430 aa23.97■■□□□ 1.43
RDM1-220ENST00000616596 FAM50AQ14320 339 aaKnown RBP23.97■■□□□ 1.43
RDM1-220ENST00000616596 ADGBQ8N7X0 1667 aa23.96■■□□□ 1.43
RDM1-220ENST00000616596 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.94■■□□□ 1.42
RDM1-220ENST00000616596 SHANK2Q9UPX8 1470 aa23.94■■□□□ 1.42
RDM1-220ENST00000616596 RTEL1-TNFRSF6BF6WH68 1400 aa23.93■■□□□ 1.42
RDM1-220ENST00000616596 MYT1LQ9UL68 1186 aa23.92■■□□□ 1.42
RDM1-220ENST00000616596 C9orf84Q5VXU9 1444 aa23.92■■□□□ 1.42
RDM1-220ENST00000616596 ATP10AO60312 1499 aa23.91■■□□□ 1.42
RDM1-220ENST00000616596 PLXNC1O60486 1568 aa23.9■■□□□ 1.42
RDM1-220ENST00000616596 REREQ9P2R6 1566 aa23.9■■□□□ 1.42
RDM1-220ENST00000616596 TSPY4P0CV99 314 aa23.89■■□□□ 1.41
RDM1-220ENST00000616596 TSPY10P0CW01 314 aa23.89■■□□□ 1.41
RDM1-220ENST00000616596 PTPRKQ15262 1439 aa23.88■■□□□ 1.41
RDM1-220ENST00000616596 ADGRL2O95490 1459 aa23.83■■□□□ 1.41
RDM1-220ENST00000616596 A2MP01023 1474 aa23.82■■□□□ 1.4
RDM1-220ENST00000616596 CHIC2Q9UKJ5 165 aa23.82■■□□□ 1.4
RDM1-220ENST00000616596 BCORL1Q5H9F3 1711 aa23.8■■□□□ 1.4
RDM1-220ENST00000616596 AGLP35573 1532 aa23.79■■□□□ 1.4
RDM1-220ENST00000616596 ITGAEP38570 1179 aa23.79■■□□□ 1.4
RDM1-220ENST00000616596 NCOA1Q15788 1441 aa23.78■■□□□ 1.4
RDM1-220ENST00000616596 DHX29Q7Z478 1369 aaKnown RBP23.77■■□□□ 1.4
RDM1-220ENST00000616596 DUOX2Q9NRD8 1548 aa23.76■■□□□ 1.39
RDM1-220ENST00000616596 ANKRD30AQ9BXX3 1397 aa23.76■■□□□ 1.39
RDM1-220ENST00000616596 KIF15Q9NS87 1388 aa23.75■■□□□ 1.39
RDM1-220ENST00000616596 RRP7BPQ9NSQ0 103 aa23.74■■□□□ 1.39
RDM1-220ENST00000616596 EIF2AK4Q9P2K8 1649 aaKnown RBP23.73■■□□□ 1.39
RDM1-220ENST00000616596 ADAMTSL3P82987 1691 aa23.73■■□□□ 1.39
RDM1-220ENST00000616596 ROCK1Q13464 1354 aa23.73■■□□□ 1.39
RDM1-220ENST00000616596 ARID4BQ4LE39 1312 aaPredicted RBP23.72■■□□□ 1.39
RDM1-220ENST00000616596 GCC2Q8IWJ2 1684 aa23.7■■□□□ 1.38
RDM1-220ENST00000616596 FER1L4A9Z1Z3 1794 aa23.69■■□□□ 1.38
RDM1-220ENST00000616596 RNF17Q9BXT8 1623 aaKnown RBP23.68■■□□□ 1.38
RDM1-220ENST00000616596 ERBINQ96RT1 1412 aa23.67■■□□□ 1.38
RDM1-220ENST00000616596 MADDQ8WXG6 1647 aa23.67■■□□□ 1.38
RDM1-220ENST00000616596 MROH1Q8NDA8 1641 aa23.65■■□□□ 1.38
RDM1-220ENST00000616596 DEPDC5O75140 1603 aa23.64■■□□□ 1.38
RDM1-220ENST00000616596 MLECQ14165 292 aa23.64■■□□□ 1.37
RDM1-220ENST00000616596 KDM4FA0A1W2PPD8 638 aa23.63■■□□□ 1.37
RDM1-220ENST00000616596 KIF3BO15066 747 aa23.63■■□□□ 1.37
RDM1-220ENST00000616596 RIMS1Q86UR5 1692 aaKnown RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms