RNA–Protein interactions for RNA: ENST00000616135.1

MMACHC-203, Transcript of methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria, humanhuman

TSL 2 BASIC

Gene MMACHC, Length 1,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMACHC-203ENST00000616135 PLEKHD1A6NEE1 506 aa11.48□□□□□ -0.57
MMACHC-203ENST00000616135 PPARGC1BQ86YN6 1023 aaKnown RBP11.48□□□□□ -0.57
MMACHC-203ENST00000616135 KCNH8Q96L42 1107 aa11.48□□□□□ -0.57
MMACHC-203ENST00000616135 HECW1Q76N89 1606 aa11.47□□□□□ -0.57
MMACHC-203ENST00000616135 KANK4Q5T7N3 995 aaPredicted RBP11.46□□□□□ -0.57
MMACHC-203ENST00000616135 ZCCHC11Q5TAX3 1644 aaKnown RBP11.46□□□□□ -0.57
MMACHC-203ENST00000616135 CDK11AQ9UQ88 783 aaPredicted RBP11.45□□□□□ -0.58
MMACHC-203ENST00000616135 ASXL2Q76L83 1435 aa11.45□□□□□ -0.58
MMACHC-203ENST00000616135 LRRIQ1Q96JM4 1722 aa11.45□□□□□ -0.58
MMACHC-203ENST00000616135 CCDC18Q5T9S5 1454 aa11.43□□□□□ -0.58
MMACHC-203ENST00000616135 MAGI3Q5TCQ9 1506 aa11.41□□□□□ -0.58
MMACHC-203ENST00000616135 MTUS2Q5JR59 1369 aa11.4□□□□□ -0.58
MMACHC-203ENST00000616135 FAM69CQ0P6D2 419 aa11.4□□□□□ -0.58
MMACHC-203ENST00000616135 TIAM1Q13009 1591 aa11.4□□□□□ -0.58
MMACHC-203ENST00000616135 WDR7Q9Y4E6 1490 aa11.4□□□□□ -0.58
MMACHC-203ENST00000616135 MAPKBP1O60336 1514 aa11.39□□□□□ -0.59
MMACHC-203ENST00000616135 TROQ12816 1431 aaPredicted RBP11.39□□□□□ -0.59
MMACHC-203ENST00000616135 LRRC9Q6ZRR7 1453 aa11.38□□□□□ -0.59
MMACHC-203ENST00000616135 MAP3K1Q13233 1512 aa11.37□□□□□ -0.59
MMACHC-203ENST00000616135 ABCC10Q5T3U5 1492 aa11.35□□□□□ -0.59
MMACHC-203ENST00000616135 CFAP43Q8NDM7 1665 aa11.35□□□□□ -0.59
MMACHC-203ENST00000616135 PROM2Q8N271 834 aa11.35□□□□□ -0.59
MMACHC-203ENST00000616135 KIF14Q15058 1648 aa11.33□□□□□ -0.6
MMACHC-203ENST00000616135 EHBP1L1Q8N3D4 1523 aa11.32□□□□□ -0.6
MMACHC-203ENST00000616135 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.32□□□□□ -0.6
MMACHC-203ENST00000616135 CD109Q6YHK3 1445 aa11.31□□□□□ -0.6
MMACHC-203ENST00000616135 NCOA2Q15596 1464 aa11.31□□□□□ -0.6
MMACHC-203ENST00000616135 DIP2BQ9P265 1576 aa11.31□□□□□ -0.6
MMACHC-203ENST00000616135 FBXO3Q9UK99 471 aa11.3□□□□□ -0.6
MMACHC-203ENST00000616135 CCNB3Q8WWL7 1395 aa11.3□□□□□ -0.6
MMACHC-203ENST00000616135 ZNF777Q9ULD5 760 aaPredicted RBP11.3□□□□□ -0.6
MMACHC-203ENST00000616135 GLI2P10070 1586 aa11.29□□□□□ -0.6
MMACHC-203ENST00000616135 PHLDB1Q86UU1 1377 aa11.29□□□□□ -0.6
MMACHC-203ENST00000616135 AMER1Q5JTC6 1135 aaPredicted RBP11.29□□□□□ -0.6
MMACHC-203ENST00000616135 TTC37Q6PGP7 1564 aa11.28□□□□□ -0.6
MMACHC-203ENST00000616135 GPATCH8Q9UKJ3 1502 aaKnown RBP11.28□□□□□ -0.6
MMACHC-203ENST00000616135 CFDP1Q9UEE9 299 aaPredicted RBP11.28□□□□□ -0.6
MMACHC-203ENST00000616135 PLCH2O75038 1416 aa11.27□□□□□ -0.6
MMACHC-203ENST00000616135 KIF13AQ9H1H9 1805 aa11.27□□□□□ -0.6
MMACHC-203ENST00000616135 SUPT6HQ7KZ85 1726 aaKnown RBP11.27□□□□□ -0.61
MMACHC-203ENST00000616135 ABCA9Q8IUA7 1624 aa11.27□□□□□ -0.61
MMACHC-203ENST00000616135 ZNF644Q9H582 1327 aaPredicted RBP11.26□□□□□ -0.61
MMACHC-203ENST00000616135 EFCAB2Q5VUJ9 269 aa11.26□□□□□ -0.61
MMACHC-203ENST00000616135 RTN4Q9NQC3 1192 aaKnown RBP11.25□□□□□ -0.61
MMACHC-203ENST00000616135 TSPOAP1O95153 1857 aa11.25□□□□□ -0.61
MMACHC-203ENST00000616135 SPDYE2BA6NHP3 402 aa11.25□□□□□ -0.61
MMACHC-203ENST00000616135 SPDYE6P0CI01 402 aa11.25□□□□□ -0.61
MMACHC-203ENST00000616135 SPDYE2Q495Y8 402 aa11.25□□□□□ -0.61
MMACHC-203ENST00000616135 MAP3K4Q9Y6R4 1608 aa11.24□□□□□ -0.61
MMACHC-203ENST00000616135 RBM42Q9BTD8 480 aaKnown RBP11.24□□□□□ -0.61
MMACHC-203ENST00000616135 ZNF692Q9BU19 519 aaPredicted RBP11.24□□□□□ -0.61
MMACHC-203ENST00000616135 MYOM3Q5VTT5 1437 aa11.24□□□□□ -0.61
MMACHC-203ENST00000616135 HNRNPMP52272 730 aaKnown RBP eCLIP11.23□□□□□ -0.61
MMACHC-203ENST00000616135 ARHGAP5Q13017 1502 aa11.23□□□□□ -0.61
MMACHC-203ENST00000616135 FAM50AQ14320 339 aaKnown RBP11.22□□□□□ -0.61
MMACHC-203ENST00000616135 FANCAO15360 1455 aa11.22□□□□□ -0.61
MMACHC-203ENST00000616135 CDC42BPAQ5VT25 1732 aa11.21□□□□□ -0.61
MMACHC-203ENST00000616135 AKNAQ7Z591 1439 aa11.21□□□□□ -0.62
MMACHC-203ENST00000616135 MYO5CQ9NQX4 1742 aa11.2□□□□□ -0.62
MMACHC-203ENST00000616135 CDC42BPBQ9Y5S2 1711 aa11.2□□□□□ -0.62
MMACHC-203ENST00000616135 PPRC1Q5VV67 1664 aaKnown RBP11.2□□□□□ -0.62
MMACHC-203ENST00000616135 FGD6Q6ZV73 1430 aa11.2□□□□□ -0.62
MMACHC-203ENST00000616135 PREX2Q70Z35 1606 aa11.19□□□□□ -0.62
MMACHC-203ENST00000616135 MIA2Q96PC5 1412 aa11.19□□□□□ -0.62
MMACHC-203ENST00000616135 RAPGEF3O95398 923 aa11.19□□□□□ -0.62
MMACHC-203ENST00000616135 SCAPERQ9BY12 1400 aa11.18□□□□□ -0.62
MMACHC-203ENST00000616135 TEX14Q8IWB6 1497 aa11.18□□□□□ -0.62
MMACHC-203ENST00000616135 ITGAEP38570 1179 aa11.18□□□□□ -0.62
MMACHC-203ENST00000616135 AFAP1Q8N556 730 aa11.18□□□□□ -0.62
MMACHC-203ENST00000616135 SSUH2Q9Y2M2 353 aa11.18□□□□□ -0.62
MMACHC-203ENST00000616135 ARAP3Q8WWN8 1544 aa11.17□□□□□ -0.62
MMACHC-203ENST00000616135 ARHGEF12Q9NZN5 1544 aa11.17□□□□□ -0.62
MMACHC-203ENST00000616135 ADGRL1O94910 1474 aa11.17□□□□□ -0.62
MMACHC-203ENST00000616135 NEO1Q92859 1461 aa11.17□□□□□ -0.62
MMACHC-203ENST00000616135 COL17A1Q9UMD9 1497 aaPredicted RBP11.17□□□□□ -0.62
MMACHC-203ENST00000616135 SAMD9LQ8IVG5 1584 aa11.16□□□□□ -0.62
MMACHC-203ENST00000616135 CAMSAP2Q08AD1 1489 aa11.16□□□□□ -0.62
MMACHC-203ENST00000616135 ITSN2Q9NZM3 1697 aa11.16□□□□□ -0.62
MMACHC-203ENST00000616135 RRBP1Q9P2E9 1410 aaKnown RBP11.15□□□□□ -0.63
MMACHC-203ENST00000616135 TRAPPC8Q9Y2L5 1435 aa11.15□□□□□ -0.63
MMACHC-203ENST00000616135 PTPN23Q9H3S7 1636 aa11.15□□□□□ -0.63
MMACHC-203ENST00000616135 VASPP50552 380 aaPredicted RBP11.14□□□□□ -0.63
MMACHC-203ENST00000616135 TCOF1Q13428 1488 aaKnown RBP11.14□□□□□ -0.63
MMACHC-203ENST00000616135 CHIC2Q9UKJ5 165 aa11.14□□□□□ -0.63
MMACHC-203ENST00000616135 MYT1LQ9UL68 1186 aa11.14□□□□□ -0.63
MMACHC-203ENST00000616135 KIAA1107Q9UPP5 1409 aa11.13□□□□□ -0.63
MMACHC-203ENST00000616135 DENND4BO75064 1496 aaPredicted RBP11.13□□□□□ -0.63
MMACHC-203ENST00000616135 MBD5Q9P267 1494 aa11.13□□□□□ -0.63
MMACHC-203ENST00000616135 SYCP2Q9BX26 1530 aa11.13□□□□□ -0.63
MMACHC-203ENST00000616135 PLEKHH2Q8IVE3 1493 aa11.12□□□□□ -0.63
MMACHC-203ENST00000616135 ABCC1P33527 1531 aa11.12□□□□□ -0.63
MMACHC-203ENST00000616135 TSPY4P0CV99 314 aa11.12□□□□□ -0.63
MMACHC-203ENST00000616135 TSPY10P0CW01 314 aa11.12□□□□□ -0.63
MMACHC-203ENST00000616135 RSPH4AQ5TD94 716 aa11.12□□□□□ -0.63
MMACHC-203ENST00000616135 CHRDL2Q6WN34 429 aa11.12□□□□□ -0.63
MMACHC-203ENST00000616135 ABCC5O15440 1437 aa11.12□□□□□ -0.63
MMACHC-203ENST00000616135 CFAP74Q9C0B2 1584 aa11.11□□□□□ -0.63
MMACHC-203ENST00000616135 SPAG9O60271 1321 aaKnown RBP11.1□□□□□ -0.63
MMACHC-203ENST00000616135 TRIM26Q12899 539 aaPredicted RBP11.09□□□□□ -0.63
MMACHC-203ENST00000616135 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms