RNA–Protein interactions for RNA: ENST00000616084.1

PCIF1-203, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 2

Gene PCIF1, Length 627 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-203ENST00000616084 ARAP3Q8WWN8 1544 aa18.39■□□□□ 0.53
PCIF1-203ENST00000616084 COL17A1Q9UMD9 1497 aaPredicted RBP18.38■□□□□ 0.53
PCIF1-203ENST00000616084 EFCAB2Q5VUJ9 269 aa18.37■□□□□ 0.53
PCIF1-203ENST00000616084 AKNAQ7Z591 1439 aa18.37■□□□□ 0.53
PCIF1-203ENST00000616084 CCNB3Q8WWL7 1395 aa18.36■□□□□ 0.53
PCIF1-203ENST00000616084 ITSN2Q9NZM3 1697 aa18.36■□□□□ 0.53
PCIF1-203ENST00000616084 KANK4Q5T7N3 995 aaPredicted RBP18.35■□□□□ 0.53
PCIF1-203ENST00000616084 NCOA2Q15596 1464 aa18.33■□□□□ 0.53
PCIF1-203ENST00000616084 GPATCH8Q9UKJ3 1502 aaKnown RBP18.33■□□□□ 0.52
PCIF1-203ENST00000616084 ADGRL1O94910 1474 aa18.33■□□□□ 0.52
PCIF1-203ENST00000616084 ZNF777Q9ULD5 760 aaPredicted RBP18.31■□□□□ 0.52
PCIF1-203ENST00000616084 RICTORQ6R327 1708 aa18.31■□□□□ 0.52
PCIF1-203ENST00000616084 DENND4BO75064 1496 aaPredicted RBP18.31■□□□□ 0.52
PCIF1-203ENST00000616084 CFDP1Q9UEE9 299 aaPredicted RBP18.3■□□□□ 0.52
PCIF1-203ENST00000616084 SCAPERQ9BY12 1400 aa18.3■□□□□ 0.52
PCIF1-203ENST00000616084 RAPGEF3O95398 923 aa18.29■□□□□ 0.52
PCIF1-203ENST00000616084 FRMPD1Q5SYB0 1578 aa18.27■□□□□ 0.52
PCIF1-203ENST00000616084 SAMD9LQ8IVG5 1584 aa18.26■□□□□ 0.51
PCIF1-203ENST00000616084 ABCC1P33527 1531 aa18.26■□□□□ 0.51
PCIF1-203ENST00000616084 POGZQ7Z3K3 1410 aa18.23■□□□□ 0.51
PCIF1-203ENST00000616084 PLEKHH2Q8IVE3 1493 aa18.22■□□□□ 0.51
PCIF1-203ENST00000616084 SYCP2Q9BX26 1530 aa18.22■□□□□ 0.51
PCIF1-203ENST00000616084 ZNF518AQ6AHZ1 1483 aa18.2■□□□□ 0.5
PCIF1-203ENST00000616084 MYT1LQ9UL68 1186 aa18.2■□□□□ 0.5
PCIF1-203ENST00000616084 ZMYM4Q5VZL5 1548 aa18.19■□□□□ 0.5
PCIF1-203ENST00000616084 ARHGEF12Q9NZN5 1544 aa18.19■□□□□ 0.5
PCIF1-203ENST00000616084 HNRNPMP52272 730 aaKnown RBP eCLIP18.19■□□□□ 0.5
PCIF1-203ENST00000616084 MYOM3Q5VTT5 1437 aa18.19■□□□□ 0.5
PCIF1-203ENST00000616084 ZNF644Q9H582 1327 aaPredicted RBP18.19■□□□□ 0.5
PCIF1-203ENST00000616084 TRAPPC8Q9Y2L5 1435 aa18.18■□□□□ 0.5
PCIF1-203ENST00000616084 PPARGC1BQ86YN6 1023 aaKnown RBP18.18■□□□□ 0.5
PCIF1-203ENST00000616084 AFAP1Q8N556 730 aa18.18■□□□□ 0.5
PCIF1-203ENST00000616084 CAMSAP2Q08AD1 1489 aa18.18■□□□□ 0.5
PCIF1-203ENST00000616084 KIAA1107Q9UPP5 1409 aa18.16■□□□□ 0.5
PCIF1-203ENST00000616084 ZFYVE16Q7Z3T8 1539 aa18.16■□□□□ 0.5
PCIF1-203ENST00000616084 KDM5CP41229 1560 aa18.16■□□□□ 0.5
PCIF1-203ENST00000616084 HECW2Q9P2P5 1572 aa18.16■□□□□ 0.5
PCIF1-203ENST00000616084 ARHGEF40Q8TER5 1519 aa18.15■□□□□ 0.5
PCIF1-203ENST00000616084 MIA2Q96PC5 1412 aa18.15■□□□□ 0.5
PCIF1-203ENST00000616084 MAGI2Q86UL8 1455 aa18.14■□□□□ 0.5
PCIF1-203ENST00000616084 PTPN23Q9H3S7 1636 aa18.13■□□□□ 0.49
PCIF1-203ENST00000616084 YEATS2Q9ULM3 1422 aa18.12■□□□□ 0.49
PCIF1-203ENST00000616084 KIDINS220Q9ULH0 1771 aa18.11■□□□□ 0.49
PCIF1-203ENST00000616084 FGD6Q6ZV73 1430 aa18.1■□□□□ 0.49
PCIF1-203ENST00000616084 SPAG9O60271 1321 aaKnown RBP18.1■□□□□ 0.49
PCIF1-203ENST00000616084 MBD5Q9P267 1494 aa18.09■□□□□ 0.49
PCIF1-203ENST00000616084 MLH3Q9UHC1 1453 aa18.09■□□□□ 0.49
PCIF1-203ENST00000616084 ARHGEF5Q12774 1597 aa18.08■□□□□ 0.49
PCIF1-203ENST00000616084 CCDC141Q6ZP82 1450 aa18.08■□□□□ 0.49
PCIF1-203ENST00000616084 RSPH4AQ5TD94 716 aa18.08■□□□□ 0.48
PCIF1-203ENST00000616084 ABCA6Q8N139 1617 aa18.08■□□□□ 0.48
PCIF1-203ENST00000616084 ARID4BQ4LE39 1312 aaPredicted RBP18.07■□□□□ 0.48
PCIF1-203ENST00000616084 ATP7AQ04656 1500 aa18.07■□□□□ 0.48
PCIF1-203ENST00000616084 INO80Q9ULG1 1556 aaPredicted RBP18.06■□□□□ 0.48
PCIF1-203ENST00000616084 DIP2CQ9Y2E4 1556 aa18.06■□□□□ 0.48
PCIF1-203ENST00000616084 ATP10AO60312 1499 aa18.06■□□□□ 0.48
PCIF1-203ENST00000616084 C9orf84Q5VXU9 1444 aa18.05■□□□□ 0.48
PCIF1-203ENST00000616084 TCOF1Q13428 1488 aaKnown RBP18.04■□□□□ 0.48
PCIF1-203ENST00000616084 FAM50AQ14320 339 aaKnown RBP18.04■□□□□ 0.48
PCIF1-203ENST00000616084 TSPY4P0CV99 314 aa18.03■□□□□ 0.48
PCIF1-203ENST00000616084 TSPY10P0CW01 314 aa18.03■□□□□ 0.48
PCIF1-203ENST00000616084 SIGLEC1Q9BZZ2 1709 aa18.02■□□□□ 0.48
PCIF1-203ENST00000616084 CROCC2H7BZ55 1655 aa18.02■□□□□ 0.47
PCIF1-203ENST00000616084 ADGBQ8N7X0 1667 aa18.02■□□□□ 0.47
PCIF1-203ENST00000616084 DNMT1P26358 1616 aaKnown RBP18.01■□□□□ 0.47
PCIF1-203ENST00000616084 BCORL1Q5H9F3 1711 aa18.01■□□□□ 0.47
PCIF1-203ENST00000616084 RTEL1-TNFRSF6BF6WH68 1400 aa18■□□□□ 0.47
PCIF1-203ENST00000616084 REREQ9P2R6 1566 aa17.99■□□□□ 0.47
PCIF1-203ENST00000616084 MAST1Q9Y2H9 1570 aa17.99■□□□□ 0.47
PCIF1-203ENST00000616084 KDM4FA0A1W2PPD8 638 aa17.97■□□□□ 0.47
PCIF1-203ENST00000616084 ABCC5O15440 1437 aa17.97■□□□□ 0.47
PCIF1-203ENST00000616084 DAPK1P53355 1430 aa17.97■□□□□ 0.47
PCIF1-203ENST00000616084 A2MP01023 1474 aa17.96■□□□□ 0.47
PCIF1-203ENST00000616084 MLECQ14165 292 aa17.96■□□□□ 0.47
PCIF1-203ENST00000616084 ADAMTSL3P82987 1691 aa17.95■□□□□ 0.46
PCIF1-203ENST00000616084 SHANK2Q9UPX8 1470 aa17.94■□□□□ 0.46
PCIF1-203ENST00000616084 FER1L4A9Z1Z3 1794 aa17.93■□□□□ 0.46
PCIF1-203ENST00000616084 AGLP35573 1532 aa17.93■□□□□ 0.46
PCIF1-203ENST00000616084 PLXNC1O60486 1568 aa17.92■□□□□ 0.46
PCIF1-203ENST00000616084 MADDQ8WXG6 1647 aa17.91■□□□□ 0.46
PCIF1-203ENST00000616084 RIMS1Q86UR5 1692 aaKnown RBP17.91■□□□□ 0.46
PCIF1-203ENST00000616084 CHIC2Q9UKJ5 165 aa17.91■□□□□ 0.46
PCIF1-203ENST00000616084 ITGAEP38570 1179 aa17.9■□□□□ 0.46
PCIF1-203ENST00000616084 RRBP1Q9P2E9 1410 aaKnown RBP17.89■□□□□ 0.46
PCIF1-203ENST00000616084 DHX29Q7Z478 1369 aaKnown RBP17.89■□□□□ 0.45
PCIF1-203ENST00000616084 ANKRD30AQ9BXX3 1397 aa17.88■□□□□ 0.45
PCIF1-203ENST00000616084 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.88■□□□□ 0.45
PCIF1-203ENST00000616084 RRP7BPQ9NSQ0 103 aa17.87■□□□□ 0.45
PCIF1-203ENST00000616084 KIF15Q9NS87 1388 aa17.86■□□□□ 0.45
PCIF1-203ENST00000616084 DUOX2Q9NRD8 1548 aa17.86■□□□□ 0.45
PCIF1-203ENST00000616084 KIF3BO15066 747 aa17.85■□□□□ 0.45
PCIF1-203ENST00000616084 ESF1Q9H501 851 aaKnown RBP17.85■□□□□ 0.45
PCIF1-203ENST00000616084 GGT6Q6P531 493 aa17.84■□□□□ 0.45
PCIF1-203ENST00000616084 ADGRL2O95490 1459 aa17.83■□□□□ 0.45
PCIF1-203ENST00000616084 EIF2AK4Q9P2K8 1649 aaKnown RBP17.83■□□□□ 0.44
PCIF1-203ENST00000616084 PTPRKQ15262 1439 aa17.82■□□□□ 0.44
PCIF1-203ENST00000616084 NCOA1Q15788 1441 aa17.82■□□□□ 0.44
PCIF1-203ENST00000616084 PLPPR3Q6T4P5 718 aa17.82■□□□□ 0.44
PCIF1-203ENST00000616084 PTPRMP28827 1452 aa17.81■□□□□ 0.44
PCIF1-203ENST00000616084 CLTCQ00610 1675 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms