RNA–Protein interactions for RNA: ENST00000616051.1

RCC1L-204, Transcript of RCC1 like, human

TSL 2

Gene RCC1L, Length 1,610 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RCC1L-204	ENST00000616051	ARHGAP5	Q13017	1502 aa		42.76	■■■■■ 4.44
RCC1L-204	ENST00000616051	TEX14	Q8IWB6	1497 aa		42.76	■■■■■ 4.43
RCC1L-204	ENST00000616051	CFDP1	Q9UEE9	299 aa	Predicted RBP	42.75	■■■■■ 4.43
RCC1L-204	ENST00000616051	MYOM3	Q5VTT5	1437 aa		42.74	■■■■■ 4.43
RCC1L-204	ENST00000616051	EFCAB2	Q5VUJ9	269 aa		42.74	■■■■■ 4.43
RCC1L-204	ENST00000616051	FANCA	O15360	1455 aa		42.74	■■■■■ 4.43
RCC1L-204	ENST00000616051	NEO1	Q92859	1461 aa		42.67	■■■■■ 4.42
RCC1L-204	ENST00000616051	CFAP74	Q9C0B2	1584 aa		42.65	■■■■■ 4.42
RCC1L-204	ENST00000616051	ZNF777	Q9ULD5	760 aa	Predicted RBP	42.64	■■■■■ 4.42
RCC1L-204	ENST00000616051	MIA2	Q96PC5	1412 aa		42.63	■■■■■ 4.42
RCC1L-204	ENST00000616051	AKNA	Q7Z591	1439 aa		42.63	■■■■■ 4.41
RCC1L-204	ENST00000616051	FGD6	Q6ZV73	1430 aa		42.59	■■■■■ 4.41
RCC1L-204	ENST00000616051	SAMD9L	Q8IVG5	1584 aa		42.58	■■■■■ 4.41
RCC1L-204	ENST00000616051	ZNF644	Q9H582	1327 aa	Predicted RBP	42.57	■■■■■ 4.41
RCC1L-204	ENST00000616051	ADGRL1	O94910	1474 aa		42.52	■■■■■ 4.4
RCC1L-204	ENST00000616051	PTPN23	Q9H3S7	1636 aa		42.5	■■■■■ 4.39
RCC1L-204	ENST00000616051	CAMSAP2	Q08AD1	1489 aa		42.5	■■■■■ 4.39
RCC1L-204	ENST00000616051	ABCC1	P33527	1531 aa		42.48	■■■■■ 4.39
RCC1L-204	ENST00000616051	SCAPER	Q9BY12	1400 aa		42.47	■■■■■ 4.39
RCC1L-204	ENST00000616051	PLEKHH2	Q8IVE3	1493 aa		42.46	■■■■■ 4.39
RCC1L-204	ENST00000616051	ARHGEF12	Q9NZN5	1544 aa		42.46	■■■■■ 4.39
RCC1L-204	ENST00000616051	COL17A1	Q9UMD9	1497 aa	Predicted RBP	42.45	■■■■■ 4.39
RCC1L-204	ENST00000616051	KIAA1107	Q9UPP5	1409 aa		42.44	■■■■■ 4.39
RCC1L-204	ENST00000616051	TCOF1	Q13428	1488 aa	Known RBP	42.44	■■■■■ 4.39
RCC1L-204	ENST00000616051	HNRNPM	P52272	730 aa	Known RBP eCLIP	42.42	■■■■■ 4.38	2e-10	■■■□□ 19.1
RCC1L-204	ENST00000616051	SYCP2	Q9BX26	1530 aa		42.42	■■■■■ 4.38
RCC1L-204	ENST00000616051	RRBP1	Q9P2E9	1410 aa	Known RBP	42.4	■■■■■ 4.38
RCC1L-204	ENST00000616051	DENND4B	O75064	1496 aa	Predicted RBP	42.39	■■■■■ 4.38
RCC1L-204	ENST00000616051	MBD5	Q9P267	1494 aa		42.37	■■■■■ 4.37
RCC1L-204	ENST00000616051	KDM6B	O15054	1643 aa		42.37	■■■■■ 4.37
RCC1L-204	ENST00000616051	RAPGEF3	O95398	923 aa		42.36	■■■■■ 4.37
RCC1L-204	ENST00000616051	FAM50A	Q14320	339 aa	Known RBP	42.36	■■■■■ 4.37
RCC1L-204	ENST00000616051	TRAPPC8	Q9Y2L5	1435 aa		42.34	■■■■■ 4.37
RCC1L-204	ENST00000616051	POGZ	Q7Z3K3	1410 aa		42.32	■■■■■ 4.36
RCC1L-204	ENST00000616051	RICTOR	Q6R327	1708 aa		42.32	■■■■■ 4.36
RCC1L-204	ENST00000616051	AFAP1	Q8N556	730 aa		42.31	■■■■■ 4.36
RCC1L-204	ENST00000616051	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	42.29	■■■■■ 4.36
RCC1L-204	ENST00000616051	FRMPD1	Q5SYB0	1578 aa		42.28	■■■■■ 4.36
RCC1L-204	ENST00000616051	ARHGEF5	Q12774	1597 aa		42.28	■■■■■ 4.36
RCC1L-204	ENST00000616051	RSPH4A	Q5TD94	716 aa		42.28	■■■■■ 4.36
RCC1L-204	ENST00000616051	ZNF518A	Q6AHZ1	1483 aa		42.27	■■■■■ 4.36
RCC1L-204	ENST00000616051	CCDC141	Q6ZP82	1450 aa		42.23	■■■■■ 4.35
RCC1L-204	ENST00000616051	DNMT1	P26358	1616 aa	Known RBP	42.19	■■■■■ 4.35
RCC1L-204	ENST00000616051	KDM5C	P41229	1560 aa		42.19	■■■■■ 4.35
RCC1L-204	ENST00000616051	ABCC5	O15440	1437 aa		42.18	■■■■■ 4.34
RCC1L-204	ENST00000616051	DAPK1	P53355	1430 aa		42.16	■■■■■ 4.34
RCC1L-204	ENST00000616051	ZMYM4	Q5VZL5	1548 aa		42.13	■■■■■ 4.34
RCC1L-204	ENST00000616051	TSPY4	P0CV99	314 aa		42.13	■■■■■ 4.33
RCC1L-204	ENST00000616051	TSPY10	P0CW01	314 aa		42.13	■■■■■ 4.33
RCC1L-204	ENST00000616051	SPAG9	O60271	1321 aa	Known RBP	42.11	■■■■■ 4.33
RCC1L-204	ENST00000616051	CROCC2	H7BZ55	1655 aa		42.1	■■■■■ 4.33
RCC1L-204	ENST00000616051	MLH3	Q9UHC1	1453 aa		42.08	■■■■■ 4.33
RCC1L-204	ENST00000616051	HECW2	Q9P2P5	1572 aa		42.07	■■■■■ 4.32
RCC1L-204	ENST00000616051	ITGAE	P38570	1179 aa		42.06	■■■■■ 4.32
RCC1L-204	ENST00000616051	MYT1L	Q9UL68	1186 aa		42.05	■■■■■ 4.32
RCC1L-204	ENST00000616051	PTPRK	Q15262	1439 aa		42.04	■■■■■ 4.32
RCC1L-204	ENST00000616051	MAGI2	Q86UL8	1455 aa		42.04	■■■■■ 4.32
RCC1L-204	ENST00000616051	KIDINS220	Q9ULH0	1771 aa		42.04	■■■■■ 4.32
RCC1L-204	ENST00000616051	C9orf84	Q5VXU9	1444 aa		42.04	■■■■■ 4.32
RCC1L-204	ENST00000616051	SHANK2	Q9UPX8	1470 aa		42.04	■■■■■ 4.32
RCC1L-204	ENST00000616051	MAST1	Q9Y2H9	1570 aa		42.04	■■■■■ 4.32
RCC1L-204	ENST00000616051	RTEL1-TNFRSF6B	F6WH68	1400 aa		42.03	■■■■■ 4.32
RCC1L-204	ENST00000616051	INO80	Q9ULG1	1556 aa	Predicted RBP	42.03	■■■■■ 4.32
RCC1L-204	ENST00000616051	ATP7A	Q04656	1500 aa		42.01	■■■■■ 4.32
RCC1L-204	ENST00000616051	ZFYVE16	Q7Z3T8	1539 aa		42.01	■■■■■ 4.32
RCC1L-204	ENST00000616051	CHIC2	Q9UKJ5	165 aa		41.99	■■■■■ 4.31
RCC1L-204	ENST00000616051	YEATS2	Q9ULM3	1422 aa		41.98	■■■■■ 4.31
RCC1L-204	ENST00000616051	ABCA6	Q8N139	1617 aa		41.91	■■■■■ 4.3
RCC1L-204	ENST00000616051	ARHGEF40	Q8TER5	1519 aa		41.9	■■■■■ 4.3
RCC1L-204	ENST00000616051	ADGB	Q8N7X0	1667 aa		41.88	■■■■■ 4.3
RCC1L-204	ENST00000616051	DIP2C	Q9Y2E4	1556 aa		41.88	■■■■■ 4.3
RCC1L-204	ENST00000616051	ADGRL2	O95490	1459 aa		41.88	■■■■■ 4.29
RCC1L-204	ENST00000616051	TRIM26	Q12899	539 aa	Predicted RBP	41.87	■■■■■ 4.29
RCC1L-204	ENST00000616051	ANKRD30A	Q9BXX3	1397 aa		41.86	■■■■■ 4.29
RCC1L-204	ENST00000616051	NCOA1	Q15788	1441 aa		41.86	■■■■■ 4.29
RCC1L-204	ENST00000616051	PLXNC1	O60486	1568 aa		41.86	■■■■■ 4.29
RCC1L-204	ENST00000616051	ATP10A	O60312	1499 aa		41.84	■■■■■ 4.29
RCC1L-204	ENST00000616051	RRP7BP	Q9NSQ0	103 aa		41.83	■■■■■ 4.29
RCC1L-204	ENST00000616051	ROCK1	Q13464	1354 aa		41.83	■■■■■ 4.29
RCC1L-204	ENST00000616051	KIF15	Q9NS87	1388 aa		41.78	■■■■■ 4.28
RCC1L-204	ENST00000616051	A2M	P01023	1474 aa		41.75	■■■■■ 4.27
RCC1L-204	ENST00000616051	DHX29	Q7Z478	1369 aa	Known RBP	41.73	■■■■■ 4.27
RCC1L-204	ENST00000616051	RERE	Q9P2R6	1566 aa		41.72	■■■■■ 4.27
RCC1L-204	ENST00000616051	DUOX2	Q9NRD8	1548 aa		41.71	■■■■■ 4.27
RCC1L-204	ENST00000616051	SIGLEC1	Q9BZZ2	1709 aa		41.68	■■■■■ 4.26
RCC1L-204	ENST00000616051	NAIP	Q13075	1403 aa		41.62	■■■■■ 4.25
RCC1L-204	ENST00000616051	HFM1	A2PYH4	1435 aa		41.62	■■■■■ 4.25
RCC1L-204	ENST00000616051	AGL	P35573	1532 aa		41.6	■■■■■ 4.25
RCC1L-204	ENST00000616051	ERBIN	Q96RT1	1412 aa		41.59	■■■■■ 4.25
RCC1L-204	ENST00000616051	ANKRD50	Q9ULJ7	1429 aa		41.59	■■■■■ 4.25
RCC1L-204	ENST00000616051	GCC2	Q8IWJ2	1684 aa		41.58	■■■■■ 4.25
RCC1L-204	ENST00000616051	ARID4B	Q4LE39	1312 aa	Predicted RBP	41.56	■■■■■ 4.24
RCC1L-204	ENST00000616051	KIF3B	O15066	747 aa		41.53	■■■■■ 4.24
RCC1L-204	ENST00000616051	EIF2AK4	Q9P2K8	1649 aa	Known RBP	41.52	■■■■■ 4.24
RCC1L-204	ENST00000616051	BCORL1	Q5H9F3	1711 aa		41.51	■■■■■ 4.24
RCC1L-204	ENST00000616051	SETD5	Q9C0A6	1442 aa		41.46	■■■■■ 4.23
RCC1L-204	ENST00000616051	PCGF6	Q9BYE7	350 aa		41.44	■■■■■ 4.22
RCC1L-204	ENST00000616051	MLEC	Q14165	292 aa		41.43	■■■■■ 4.22
RCC1L-204	ENST00000616051	GGT6	Q6P531	493 aa		41.41	■■■■■ 4.22
RCC1L-204	ENST00000616051	RNF17	Q9BXT8	1623 aa	Known RBP	41.39	■■■■■ 4.22

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms