RNA–Protein interactions for RNA: ENST00000616042.1

LRCOL1-205, Transcript of leucine rich colipase like 1, humanhuman

TSL 5

Gene LRCOL1, Length 744 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1-205ENST00000616042 CASKIN1Q8WXD9 1431 aa30.29■■■□□ 2.44
LRCOL1-205ENST00000616042 SCAPERQ9BY12 1400 aa30.29■■■□□ 2.44
LRCOL1-205ENST00000616042 ZFYVE16Q7Z3T8 1539 aa30.28■■■□□ 2.44
LRCOL1-205ENST00000616042 CCDC18Q5T9S5 1454 aa30.26■■■□□ 2.44
LRCOL1-205ENST00000616042 LRRIQ1Q96JM4 1722 aa30.25■■■□□ 2.43
LRCOL1-205ENST00000616042 MADDQ8WXG6 1647 aa30.23■■■□□ 2.43
LRCOL1-205ENST00000616042 YEATS2Q9ULM3 1422 aa30.22■■■□□ 2.43
LRCOL1-205ENST00000616042 PCF11O94913 1555 aaKnown RBP30.21■■■□□ 2.43
LRCOL1-205ENST00000616042 FYCO1Q9BQS8 1478 aa30.18■■■□□ 2.42
LRCOL1-205ENST00000616042 ARHGAP5Q13017 1502 aa30.17■■■□□ 2.42
LRCOL1-205ENST00000616042 ZNF518AQ6AHZ1 1483 aa30.16■■■□□ 2.42
LRCOL1-205ENST00000616042 ATP10AO60312 1499 aa30.12■■■□□ 2.41
LRCOL1-205ENST00000616042 KDM5CP41229 1560 aa30.11■■■□□ 2.41
LRCOL1-205ENST00000616042 SIGLEC1Q9BZZ2 1709 aa30.1■■■□□ 2.41
LRCOL1-205ENST00000616042 C9orf84Q5VXU9 1444 aa30.09■■■□□ 2.41
LRCOL1-205ENST00000616042 RIMS1Q86UR5 1692 aaKnown RBP30.09■■■□□ 2.41
LRCOL1-205ENST00000616042 PREX2Q70Z35 1606 aa30.08■■■□□ 2.41
LRCOL1-205ENST00000616042 CDC42BPBQ9Y5S2 1711 aa30.07■■■□□ 2.4
LRCOL1-205ENST00000616042 AFAP1Q8N556 730 aa30.02■■■□□ 2.4
LRCOL1-205ENST00000616042 LMTK3Q96Q04 1460 aa30.01■■■□□ 2.4
LRCOL1-205ENST00000616042 ABCC1P33527 1531 aa30.01■■■□□ 2.39
LRCOL1-205ENST00000616042 ARHGEF12Q9NZN5 1544 aa30.01■■■□□ 2.39
LRCOL1-205ENST00000616042 MLH3Q9UHC1 1453 aa30■■■□□ 2.39
LRCOL1-205ENST00000616042 ILDR1Q86SU0 546 aaPredicted RBP29.99■■■□□ 2.39
LRCOL1-205ENST00000616042 REREQ9P2R6 1566 aa29.98■■■□□ 2.39
LRCOL1-205ENST00000616042 FER1L4A9Z1Z3 1794 aa29.97■■■□□ 2.39
LRCOL1-205ENST00000616042 CDC42BPAQ5VT25 1732 aa29.96■■■□□ 2.39
LRCOL1-205ENST00000616042 DIP2CQ9Y2E4 1556 aa29.95■■■□□ 2.39
LRCOL1-205ENST00000616042 MLECQ14165 292 aa29.95■■■□□ 2.39
LRCOL1-205ENST00000616042 ITSN2Q9NZM3 1697 aa29.93■■■□□ 2.38
LRCOL1-205ENST00000616042 TRAPPC8Q9Y2L5 1435 aa29.93■■■□□ 2.38
LRCOL1-205ENST00000616042 GPATCH8Q9UKJ3 1502 aaKnown RBP29.9■■■□□ 2.38
LRCOL1-205ENST00000616042 ABCA6Q8N139 1617 aa29.89■■■□□ 2.37
LRCOL1-205ENST00000616042 MYT1LQ9UL68 1186 aa29.88■■■□□ 2.37
LRCOL1-205ENST00000616042 AGLP35573 1532 aa29.87■■■□□ 2.37
LRCOL1-205ENST00000616042 SAMD9LQ8IVG5 1584 aa29.84■■■□□ 2.37
LRCOL1-205ENST00000616042 MTUS2Q5JR59 1369 aa29.83■■■□□ 2.37
LRCOL1-205ENST00000616042 PLEKHH2Q8IVE3 1493 aa29.82■■■□□ 2.36
LRCOL1-205ENST00000616042 KIAA1107Q9UPP5 1409 aa29.82■■■□□ 2.36
LRCOL1-205ENST00000616042 KIDINS220Q9ULH0 1771 aa29.82■■■□□ 2.36
LRCOL1-205ENST00000616042 CEP162Q5TB80 1403 aa29.81■■■□□ 2.36
LRCOL1-205ENST00000616042 CCNB3Q8WWL7 1395 aa29.8■■■□□ 2.36
LRCOL1-205ENST00000616042 PLPPR3Q6T4P5 718 aa29.8■■■□□ 2.36
LRCOL1-205ENST00000616042 ZNF777Q9ULD5 760 aaPredicted RBP29.79■■■□□ 2.36
LRCOL1-205ENST00000616042 SYCP2Q9BX26 1530 aa29.79■■■□□ 2.36
LRCOL1-205ENST00000616042 CFDP1Q9UEE9 299 aaPredicted RBP29.78■■■□□ 2.36
LRCOL1-205ENST00000616042 HSPA2P54652 639 aa29.76■■■□□ 2.35
LRCOL1-205ENST00000616042 EHBP1L1Q8N3D4 1523 aa29.76■■■□□ 2.35
LRCOL1-205ENST00000616042 PREX1Q8TCU6 1659 aa29.75■■■□□ 2.35
LRCOL1-205ENST00000616042 SPAG9O60271 1321 aaKnown RBP29.73■■■□□ 2.35
LRCOL1-205ENST00000616042 CEBPAP49715 358 aaPredicted RBP29.71■■■□□ 2.35
LRCOL1-205ENST00000616042 HNRNPMP52272 730 aaKnown RBP eCLIP29.71■■■□□ 2.35
LRCOL1-205ENST00000616042 ATP7AQ04656 1500 aa29.69■■■□□ 2.34
LRCOL1-205ENST00000616042 CNTLNQ9NXG0 1405 aa29.69■■■□□ 2.34
LRCOL1-205ENST00000616042 TIAM1Q13009 1591 aa29.69■■■□□ 2.34
LRCOL1-205ENST00000616042 FBXO41Q8TF61 875 aa29.68■■■□□ 2.34
LRCOL1-205ENST00000616042 ESF1Q9H501 851 aaKnown RBP29.68■■■□□ 2.34
LRCOL1-205ENST00000616042 INO80Q9ULG1 1556 aaPredicted RBP29.68■■■□□ 2.34
LRCOL1-205ENST00000616042 UHRF1BP1Q6BDS2 1440 aa29.65■■■□□ 2.34
LRCOL1-205ENST00000616042 C3P01024 1663 aa29.64■■■□□ 2.34
LRCOL1-205ENST00000616042 SETD1BQ9UPS6 1966 aaKnown RBP29.63■■■□□ 2.33
LRCOL1-205ENST00000616042 PLXNC1O60486 1568 aa29.62■■■□□ 2.33
LRCOL1-205ENST00000616042 A2MP01023 1474 aa29.6■■■□□ 2.33
LRCOL1-205ENST00000616042 MBD5Q9P267 1494 aa29.6■■■□□ 2.33
LRCOL1-205ENST00000616042 MROH2AA6NES4 1674 aa29.58■■■□□ 2.33
LRCOL1-205ENST00000616042 RTEL1-TNFRSF6BF6WH68 1400 aa29.56■■■□□ 2.32
LRCOL1-205ENST00000616042 ZNF644Q9H582 1327 aaPredicted RBP29.56■■■□□ 2.32
LRCOL1-205ENST00000616042 SUPT6HQ7KZ85 1726 aaKnown RBP29.55■■■□□ 2.32
LRCOL1-205ENST00000616042 NCOA2Q15596 1464 aa29.55■■■□□ 2.32
LRCOL1-205ENST00000616042 NPATQ14207 1427 aa29.54■■■□□ 2.32
LRCOL1-205ENST00000616042 DMRT2Q9Y5R5 561 aa29.54■■■□□ 2.32
LRCOL1-205ENST00000616042 VPS8Q8N3P4 1428 aa29.54■■■□□ 2.32
LRCOL1-205ENST00000616042 ADGBQ8N7X0 1667 aa29.53■■■□□ 2.32
LRCOL1-205ENST00000616042 PPP6R1Q9UPN7 881 aa29.5■■■□□ 2.31
LRCOL1-205ENST00000616042 ZMYM3Q14202 1370 aa29.5■■■□□ 2.31
LRCOL1-205ENST00000616042 RSPH4AQ5TD94 716 aa29.49■■■□□ 2.31
LRCOL1-205ENST00000616042 STRCQ7RTU9 1775 aa29.48■■■□□ 2.31
LRCOL1-205ENST00000616042 CCDC141Q6ZP82 1450 aa29.47■■■□□ 2.31
LRCOL1-205ENST00000616042 LOC105371045A0A1W2PR82 267 aa29.46■■■□□ 2.31
LRCOL1-205ENST00000616042 CAMSAP2Q08AD1 1489 aa29.46■■■□□ 2.31
LRCOL1-205ENST00000616042 MAP3K1Q13233 1512 aa29.45■■■□□ 2.3
LRCOL1-205ENST00000616042 LRRC9Q6ZRR7 1453 aa29.44■■■□□ 2.3
LRCOL1-205ENST00000616042 DHX29Q7Z478 1369 aaKnown RBP29.43■■■□□ 2.3
LRCOL1-205ENST00000616042 CERKQ8TCT0 537 aa29.43■■■□□ 2.3
LRCOL1-205ENST00000616042 PTPRTO14522 1441 aa29.42■■■□□ 2.3
LRCOL1-205ENST00000616042 CLTCQ00610 1675 aaKnown RBP29.41■■■□□ 2.3
LRCOL1-205ENST00000616042 GGT6Q6P531 493 aa29.4■■■□□ 2.3
LRCOL1-205ENST00000616042 ARHGEF5Q12774 1597 aa29.39■■■□□ 2.3
LRCOL1-205ENST00000616042 PTPRKQ15262 1439 aa29.37■■■□□ 2.29
LRCOL1-205ENST00000616042 NCOA1Q15788 1441 aa29.37■■■□□ 2.29
LRCOL1-205ENST00000616042 FAM135AQ9P2D6 1515 aa29.35■■■□□ 2.29
LRCOL1-205ENST00000616042 ZNF142P52746 1687 aaPredicted RBP29.31■■■□□ 2.28
LRCOL1-205ENST00000616042 TSPY4P0CV99 314 aa29.3■■■□□ 2.28
LRCOL1-205ENST00000616042 TSPY10P0CW01 314 aa29.3■■■□□ 2.28
LRCOL1-205ENST00000616042 MYO3AQ8NEV4 1616 aa29.3■■■□□ 2.28
LRCOL1-205ENST00000616042 MIA2Q96PC5 1412 aa29.29■■■□□ 2.28
LRCOL1-205ENST00000616042 CAMSAP1Q5T5Y3 1602 aa29.29■■■□□ 2.28
LRCOL1-205ENST00000616042 KIF3BO15066 747 aa29.27■■■□□ 2.28
LRCOL1-205ENST00000616042 KANK4Q5T7N3 995 aaPredicted RBP29.27■■■□□ 2.28
LRCOL1-205ENST00000616042 CEP170BQ9Y4F5 1589 aaPredicted RBP29.26■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms