RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 MYO5CQ9NQX4 1742 aa12.99□□□□□ -0.33
VPS11-206ENST00000614944 AKNAQ7Z591 1439 aa12.98□□□□□ -0.33
VPS11-206ENST00000614944 ABCA9Q8IUA7 1624 aa12.98□□□□□ -0.33
VPS11-206ENST00000614944 GPATCH8Q9UKJ3 1502 aaKnown RBP12.98□□□□□ -0.33
VPS11-206ENST00000614944 CROCC2H7BZ55 1655 aa12.97□□□□□ -0.33
VPS11-206ENST00000614944 DNMT1P26358 1616 aaKnown RBP12.97□□□□□ -0.33
VPS11-206ENST00000614944 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.97□□□□□ -0.33
VPS11-206ENST00000614944 ANO8Q9HCE9 1232 aaPredicted RBP12.97□□□□□ -0.33
VPS11-206ENST00000614944 WDR7Q9Y4E6 1490 aa12.96□□□□□ -0.33
VPS11-206ENST00000614944 PLEKHD1A6NEE1 506 aa12.96□□□□□ -0.33
VPS11-206ENST00000614944 ARHGEF5Q12774 1597 aa12.96□□□□□ -0.33
VPS11-206ENST00000614944 CDC42BPBQ9Y5S2 1711 aa12.96□□□□□ -0.33
VPS11-206ENST00000614944 ATP1B4Q9UN42 357 aaPredicted RBP12.94□□□□□ -0.34
VPS11-206ENST00000614944 TTC37Q6PGP7 1564 aa12.94□□□□□ -0.34
VPS11-206ENST00000614944 GCC2Q8IWJ2 1684 aa12.93□□□□□ -0.34
VPS11-206ENST00000614944 GLI2P10070 1586 aa12.93□□□□□ -0.34
VPS11-206ENST00000614944 ADGBQ8N7X0 1667 aa12.93□□□□□ -0.34
VPS11-206ENST00000614944 SHANK2Q9UPX8 1470 aa12.93□□□□□ -0.34
VPS11-206ENST00000614944 PLEKHH2Q8IVE3 1493 aa12.92□□□□□ -0.34
VPS11-206ENST00000614944 CFAP74Q9C0B2 1584 aa12.92□□□□□ -0.34
VPS11-206ENST00000614944 MAST1Q9Y2H9 1570 aa12.92□□□□□ -0.34
VPS11-206ENST00000614944 CAMSAP2Q08AD1 1489 aa12.9□□□□□ -0.34
VPS11-206ENST00000614944 ROCK1Q13464 1354 aa12.9□□□□□ -0.34
VPS11-206ENST00000614944 ADGRL2O95490 1459 aa12.9□□□□□ -0.35
VPS11-206ENST00000614944 KIAA1107Q9UPP5 1409 aa12.89□□□□□ -0.35
VPS11-206ENST00000614944 PLCH2O75038 1416 aa12.89□□□□□ -0.35
VPS11-206ENST00000614944 SAMD9LQ8IVG5 1584 aa12.88□□□□□ -0.35
VPS11-206ENST00000614944 ASXL2Q76L83 1435 aa12.88□□□□□ -0.35
VPS11-206ENST00000614944 HFM1A2PYH4 1435 aa12.87□□□□□ -0.35
VPS11-206ENST00000614944 MAP3K4Q9Y6R4 1608 aa12.86□□□□□ -0.35
VPS11-206ENST00000614944 DAPK1P53355 1430 aa12.86□□□□□ -0.35
VPS11-206ENST00000614944 PODXL2Q9NZ53 605 aa12.85□□□□□ -0.35
VPS11-206ENST00000614944 ABCC1P33527 1531 aa12.85□□□□□ -0.35
VPS11-206ENST00000614944 RSPH4AQ5TD94 716 aa12.84□□□□□ -0.35
VPS11-206ENST00000614944 MBD5Q9P267 1494 aa12.84□□□□□ -0.35
VPS11-206ENST00000614944 PLXNC1O60486 1568 aa12.83□□□□□ -0.36
VPS11-206ENST00000614944 ABCC5O15440 1437 aa12.83□□□□□ -0.36
VPS11-206ENST00000614944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.82□□□□□ -0.36
VPS11-206ENST00000614944 HNRNPUL2Q1KMD3 747 aaKnown RBP12.82□□□□□ -0.36
VPS11-206ENST00000614944 SETD5Q9C0A6 1442 aa12.82□□□□□ -0.36
VPS11-206ENST00000614944 PTPRKQ15262 1439 aa12.82□□□□□ -0.36
VPS11-206ENST00000614944 ARHGAP5Q13017 1502 aa12.81□□□□□ -0.36
VPS11-206ENST00000614944 CLSPNQ9HAW4 1339 aa12.81□□□□□ -0.36
VPS11-206ENST00000614944 CCDC141Q6ZP82 1450 aa12.8□□□□□ -0.36
VPS11-206ENST00000614944 DIP2BQ9P265 1576 aa12.8□□□□□ -0.36
VPS11-206ENST00000614944 NPM1P06748 294 aaKnown RBP eCLIP12.8□□□□□ -0.36
VPS11-206ENST00000614944 CFDP1Q9UEE9 299 aaPredicted RBP12.8□□□□□ -0.36
VPS11-206ENST00000614944 NAIPQ13075 1403 aa12.79□□□□□ -0.36
VPS11-206ENST00000614944 NEO1Q92859 1461 aa12.78□□□□□ -0.36
VPS11-206ENST00000614944 RTEL1-TNFRSF6BF6WH68 1400 aa12.77□□□□□ -0.36
VPS11-206ENST00000614944 SYCP2Q9BX26 1530 aa12.76□□□□□ -0.37
VPS11-206ENST00000614944 ARID3CA6NKF2 412 aa12.76□□□□□ -0.37
VPS11-206ENST00000614944 FAM50AQ14320 339 aaKnown RBP12.76□□□□□ -0.37
VPS11-206ENST00000614944 INO80Q9ULG1 1556 aaPredicted RBP12.76□□□□□ -0.37
VPS11-206ENST00000614944 PKNOX2Q96KN3 472 aa12.75□□□□□ -0.37
VPS11-206ENST00000614944 KDM5DQ9BY66 1539 aa12.74□□□□□ -0.37
VPS11-206ENST00000614944 KDM5CP41229 1560 aa12.74□□□□□ -0.37
VPS11-206ENST00000614944 NCOA1Q15788 1441 aa12.74□□□□□ -0.37
VPS11-206ENST00000614944 FANCAO15360 1455 aa12.74□□□□□ -0.37
VPS11-206ENST00000614944 EFCAB2Q5VUJ9 269 aa12.74□□□□□ -0.37
VPS11-206ENST00000614944 RAB3GAP2Q9H2M9 1393 aa12.73□□□□□ -0.37
VPS11-206ENST00000614944 PPRC1Q5VV67 1664 aaKnown RBP12.73□□□□□ -0.37
VPS11-206ENST00000614944 BCORL1Q5H9F3 1711 aa12.73□□□□□ -0.37
VPS11-206ENST00000614944 C9orf84Q5VXU9 1444 aa12.73□□□□□ -0.37
VPS11-206ENST00000614944 ARHGEF12Q9NZN5 1544 aa12.73□□□□□ -0.37
VPS11-206ENST00000614944 KIF13AQ9H1H9 1805 aa12.72□□□□□ -0.37
VPS11-206ENST00000614944 ANKRD30AQ9BXX3 1397 aa12.72□□□□□ -0.37
VPS11-206ENST00000614944 EIF2AK4Q9P2K8 1649 aaKnown RBP12.72□□□□□ -0.37
VPS11-206ENST00000614944 CD109Q6YHK3 1445 aa12.71□□□□□ -0.37
VPS11-206ENST00000614944 ZFYVE16Q7Z3T8 1539 aa12.71□□□□□ -0.38
VPS11-206ENST00000614944 UNC13BO14795 1591 aa12.7□□□□□ -0.38
VPS11-206ENST00000614944 DHX57Q6P158 1386 aaKnown RBP12.7□□□□□ -0.38
VPS11-206ENST00000614944 DUOX2Q9NRD8 1548 aa12.7□□□□□ -0.38
VPS11-206ENST00000614944 ZNF644Q9H582 1327 aaPredicted RBP12.69□□□□□ -0.38
VPS11-206ENST00000614944 TEX14Q8IWB6 1497 aa12.69□□□□□ -0.38
VPS11-206ENST00000614944 MAGI2Q86UL8 1455 aa12.68□□□□□ -0.38
VPS11-206ENST00000614944 RICTORQ6R327 1708 aa12.68□□□□□ -0.38
VPS11-206ENST00000614944 ERBINQ96RT1 1412 aa12.68□□□□□ -0.38
VPS11-206ENST00000614944 ZMYM4Q5VZL5 1548 aa12.68□□□□□ -0.38
VPS11-206ENST00000614944 ZNF518AQ6AHZ1 1483 aa12.68□□□□□ -0.38
VPS11-206ENST00000614944 ADGRL1O94910 1474 aa12.68□□□□□ -0.38
VPS11-206ENST00000614944 DEPDC5O75140 1603 aa12.67□□□□□ -0.38
VPS11-206ENST00000614944 MLH3Q9UHC1 1453 aa12.67□□□□□ -0.38
VPS11-206ENST00000614944 KDM6BO15054 1643 aa12.67□□□□□ -0.38
VPS11-206ENST00000614944 CYB5RLQ6IPT4 315 aa12.66□□□□□ -0.38
VPS11-206ENST00000614944 POGZQ7Z3K3 1410 aa12.66□□□□□ -0.38
VPS11-206ENST00000614944 ATP7AQ04656 1500 aa12.66□□□□□ -0.38
VPS11-206ENST00000614944 HECW2Q9P2P5 1572 aa12.65□□□□□ -0.38
VPS11-206ENST00000614944 KIDINS220Q9ULH0 1771 aa12.65□□□□□ -0.39
VPS11-206ENST00000614944 KCNH8Q96L42 1107 aa12.64□□□□□ -0.39
VPS11-206ENST00000614944 SALL2Q9Y467 1007 aaPredicted RBP12.64□□□□□ -0.39
VPS11-206ENST00000614944 REREQ9P2R6 1566 aa12.64□□□□□ -0.39
VPS11-206ENST00000614944 TRAPPC8Q9Y2L5 1435 aa12.64□□□□□ -0.39
VPS11-206ENST00000614944 IQGAP3Q86VI3 1631 aa12.63□□□□□ -0.39
VPS11-206ENST00000614944 TSPY4P0CV99 314 aa12.63□□□□□ -0.39
VPS11-206ENST00000614944 TSPY10P0CW01 314 aa12.63□□□□□ -0.39
VPS11-206ENST00000614944 ANKRD50Q9ULJ7 1429 aa12.62□□□□□ -0.39
VPS11-206ENST00000614944 FRMPD1Q5SYB0 1578 aa12.62□□□□□ -0.39
VPS11-206ENST00000614944 RNF17Q9BXT8 1623 aaKnown RBP12.62□□□□□ -0.39
VPS11-206ENST00000614944 SCAPERQ9BY12 1400 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms