RNA–Protein interactions for RNA: ENST00000614670.1

RPRD1B-207, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-207ENST00000614670 ERBB3P21860 1342 aa13.6□□□□□ -0.23
RPRD1B-207ENST00000614670 NLRP6P59044 892 aa13.58□□□□□ -0.24
RPRD1B-207ENST00000614670 FBXO22Q8NEZ5 403 aa13.54□□□□□ -0.24
RPRD1B-207ENST00000614670 BCL11BQ9C0K0 894 aaPredicted RBP13.54□□□□□ -0.24
RPRD1B-207ENST00000614670 GPR153Q6NV75 609 aa13.53□□□□□ -0.24
RPRD1B-207ENST00000614670 STK24Q9Y6E0 443 aa13.5□□□□□ -0.25
RPRD1B-207ENST00000614670 VARS2Q5ST30 1063 aaKnown RBP13.49□□□□□ -0.25
RPRD1B-207ENST00000614670 ZNF687Q8N1G0 1237 aa13.47□□□□□ -0.25
RPRD1B-207ENST00000614670 MFRPQ9BY79 579 aa13.47□□□□□ -0.25
RPRD1B-207ENST00000614670 ECM2O94769 699 aaPredicted RBP13.45□□□□□ -0.26
RPRD1B-207ENST00000614670 STK25O00506 426 aa13.44□□□□□ -0.26
RPRD1B-207ENST00000614670 ARSIQ5FYB1 569 aa13.4□□□□□ -0.26
RPRD1B-207ENST00000614670 KIF3CO14782 793 aa13.39□□□□□ -0.27
RPRD1B-207ENST00000614670 PKD2Q13563 968 aa13.37□□□□□ -0.27
RPRD1B-207ENST00000614670 ZNF316A6NFI3 1004 aaPredicted RBP13.35□□□□□ -0.27
RPRD1B-207ENST00000614670 C2orf72A6NCS6 295 aa13.34□□□□□ -0.27
RPRD1B-207ENST00000614670 RGL2O15211 777 aa13.34□□□□□ -0.27
RPRD1B-207ENST00000614670 RNF166Q96A37 237 aaPredicted RBP13.34□□□□□ -0.27
RPRD1B-207ENST00000614670 PTGER2P43116 358 aa13.32□□□□□ -0.28
RPRD1B-207ENST00000614670 MYT1LQ9UL68 1186 aa13.31□□□□□ -0.28
RPRD1B-207ENST00000614670 SLC34A2O95436 690 aa13.3□□□□□ -0.28
RPRD1B-207ENST00000614670 KHSRPQ92945 711 aaKnown RBP eCLIP13.3□□□□□ -0.281e-8■■■■■ 28.5
RPRD1B-207ENST00000614670 TMC2Q8TDI7 906 aa13.25□□□□□ -0.29
RPRD1B-207ENST00000614670 PCDHGA4Q9Y5G9 962 aa13.23□□□□□ -0.29
RPRD1B-207ENST00000614670 NUDT7P0C024 238 aa13.22□□□□□ -0.29
RPRD1B-207ENST00000614670 PBX2P40425 430 aa13.21□□□□□ -0.29
RPRD1B-207ENST00000614670 LSM11P83369 360 aaKnown RBP eCLIP13.21□□□□□ -0.29
RPRD1B-207ENST00000614670 ANKRD13DQ6ZTN6 518 aa13.21□□□□□ -0.29
RPRD1B-207ENST00000614670 PPP1R37O75864 691 aa13.19□□□□□ -0.3
RPRD1B-207ENST00000614670 LHX6Q9UPM6 363 aa13.18□□□□□ -0.3
RPRD1B-207ENST00000614670 PSDA5PKW4 1024 aaPredicted RBP13.12□□□□□ -0.31
RPRD1B-207ENST00000614670 HS6ST3Q8IZP7 471 aa13.12□□□□□ -0.31
RPRD1B-207ENST00000614670 POTEEQ6S8J3 1075 aa13.11□□□□□ -0.31
RPRD1B-207ENST00000614670 PTCD2Q8WV60 388 aaKnown RBP13.11□□□□□ -0.31
RPRD1B-207ENST00000614670 KDM4FA0A1W2PPD8 638 aa13.09□□□□□ -0.31
RPRD1B-207ENST00000614670 FOXK1P85037 733 aa13.09□□□□□ -0.31
RPRD1B-207ENST00000614670 GPHNQ9NQX3 736 aaPredicted RBP13.07□□□□□ -0.32
RPRD1B-207ENST00000614670 AXIN2Q9Y2T1 843 aa13.05□□□□□ -0.32
RPRD1B-207ENST00000614670 ARHGAP33O14559 1287 aa13.04□□□□□ -0.32
RPRD1B-207ENST00000614670 PLPP6Q8IY26 295 aa13.03□□□□□ -0.32
RPRD1B-207ENST00000614670 DNAJC5Q9H3Z4 198 aa13.02□□□□□ -0.33
RPRD1B-207ENST00000614670 TBC1D12O60347 775 aa13□□□□□ -0.33
RPRD1B-207ENST00000614670 ADGRD1Q6QNK2 874 aa12.99□□□□□ -0.33
RPRD1B-207ENST00000614670 TK2O00142 265 aa12.98□□□□□ -0.33
RPRD1B-207ENST00000614670 DSG2Q14126 1118 aa12.98□□□□□ -0.33
RPRD1B-207ENST00000614670 CHGAP10645 457 aaKnown RBP12.96□□□□□ -0.33
RPRD1B-207ENST00000614670 RYDENQ9NUL5 291 aaKnown RBP12.96□□□□□ -0.33
RPRD1B-207ENST00000614670 PPP4R3BQ5MIZ7 849 aa12.94□□□□□ -0.34
RPRD1B-207ENST00000614670 HCSTQ9UBK5 93 aa12.94□□□□□ -0.34
RPRD1B-207ENST00000614670 HRO43593 1189 aa12.91□□□□□ -0.34
RPRD1B-207ENST00000614670 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
RPRD1B-207ENST00000614670 PSEN2P49810 448 aa12.89□□□□□ -0.35
RPRD1B-207ENST00000614670 DMRTA1Q5VZB9 504 aa12.89□□□□□ -0.35
RPRD1B-207ENST00000614670 OXER1Q8TDS5 423 aa12.88□□□□□ -0.35
RPRD1B-207ENST00000614670 CRISPLD2Q9H0B8 497 aa12.87□□□□□ -0.35
RPRD1B-207ENST00000614670 KCNH8Q96L42 1107 aa12.84□□□□□ -0.35
RPRD1B-207ENST00000614670 PLA2G2EQ9NZK7 142 aa12.84□□□□□ -0.35
RPRD1B-207ENST00000614670 PDE4AP27815 886 aa12.8□□□□□ -0.36
RPRD1B-207ENST00000614670 PPP1R15BQ5SWA1 713 aa12.8□□□□□ -0.36
RPRD1B-207ENST00000614670 STAC3Q96MF2 364 aa12.79□□□□□ -0.36
RPRD1B-207ENST00000614670 KCNK17Q96T54 332 aa12.79□□□□□ -0.36
RPRD1B-207ENST00000614670 UPF1Q92900 1129 aaKnown RBP eCLIP12.78□□□□□ -0.366e-8■■■■□ 19.8
RPRD1B-207ENST00000614670 SLC4A5Q9BY07 1137 aa12.78□□□□□ -0.36
RPRD1B-207ENST00000614670 BCL2L12Q9HB09 334 aa12.77□□□□□ -0.37
RPRD1B-207ENST00000614670 ZNF454Q8N9F8 522 aa12.76□□□□□ -0.37
RPRD1B-207ENST00000614670 ANO8Q9HCE9 1232 aaPredicted RBP12.76□□□□□ -0.37
RPRD1B-207ENST00000614670 VPS9D1Q9Y2B5 631 aa12.76□□□□□ -0.37
RPRD1B-207ENST00000614670 NCKAP5LQ9HCH0 1330 aa12.76□□□□□ -0.37
RPRD1B-207ENST00000614670 KCTD12Q96CX2 325 aaKnown RBP12.74□□□□□ -0.37
RPRD1B-207ENST00000614670 FOSBP53539 338 aa12.73□□□□□ -0.37
RPRD1B-207ENST00000614670 GTPBP6O43824 516 aaPredicted RBP12.71□□□□□ -0.37
RPRD1B-207ENST00000614670 PTPREP23469 700 aa12.69□□□□□ -0.38
RPRD1B-207ENST00000614670 JPH4Q96JJ6 628 aa12.69□□□□□ -0.38
RPRD1B-207ENST00000614670 BHMG1C9JSJ3 638 aaPredicted RBP12.67□□□□□ -0.38
RPRD1B-207ENST00000614670 EVI5O60447 810 aa12.67□□□□□ -0.38
RPRD1B-207ENST00000614670 MFSD10Q14728 455 aa12.66□□□□□ -0.38
RPRD1B-207ENST00000614670 DDX27Q96GQ7 796 aaKnown RBP12.66□□□□□ -0.38
RPRD1B-207ENST00000614670 LARP6Q9BRS8 491 aaKnown RBP12.66□□□□□ -0.38
RPRD1B-207ENST00000614670 ZBED2Q9BTP6 218 aa12.65□□□□□ -0.38
RPRD1B-207ENST00000614670 ZDHHC16Q969W1 377 aa12.64□□□□□ -0.39
RPRD1B-207ENST00000614670 MAP3K9P80192 1104 aa12.61□□□□□ -0.39
RPRD1B-207ENST00000614670 IFFO2Q5TF58 517 aa12.6□□□□□ -0.39
RPRD1B-207ENST00000614670 ADAM33Q9BZ11 813 aa12.6□□□□□ -0.39
RPRD1B-207ENST00000614670 PTPN5P54829 565 aa12.59□□□□□ -0.39
RPRD1B-207ENST00000614670 THSD4Q6ZMP0 1018 aa12.58□□□□□ -0.4
RPRD1B-207ENST00000614670 MRPL50Q8N5N7 158 aaKnown RBP12.58□□□□□ -0.4
RPRD1B-207ENST00000614670 GOLGA8CPA6NN73 597 aa12.57□□□□□ -0.4
RPRD1B-207ENST00000614670 EMILIN3Q9NT22 766 aa12.56□□□□□ -0.4
RPRD1B-207ENST00000614670 NBPF3Q9H094 633 aa12.55□□□□□ -0.4
RPRD1B-207ENST00000614670 WNT2BQ93097 391 aa12.54□□□□□ -0.4
RPRD1B-207ENST00000614670 RGS20O76081 388 aa12.53□□□□□ -0.4
RPRD1B-207ENST00000614670 PPP1R3GB7ZBB8 358 aa12.52□□□□□ -0.41
RPRD1B-207ENST00000614670 PCDHGA10Q9Y5H3 936 aa12.52□□□□□ -0.41
RPRD1B-207ENST00000614670 FBXW7Q969H0 707 aa12.5□□□□□ -0.41
RPRD1B-207ENST00000614670 RABGEF1Q9UJ41 708 aa12.5□□□□□ -0.41
RPRD1B-207ENST00000614670 PHF14O94880 888 aa12.49□□□□□ -0.41
RPRD1B-207ENST00000614670 TYW1BQ6NUM6 668 aa12.48□□□□□ -0.41
RPRD1B-207ENST00000614670 CADPS2Q86UW7 1296 aa12.47□□□□□ -0.41
RPRD1B-207ENST00000614670 DCAF8L2P0C7V8 631 aa12.46□□□□□ -0.41
RPRD1B-207ENST00000614670 CAMK2BQ13554 666 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms