RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 NOC3LQ8WTT2 800 aaKnown RBP17.26■□□□□ 0.35
CHD1-212ENST00000614616 PMFBP1Q8TBY8 1022 aa17.26■□□□□ 0.35
CHD1-212ENST00000614616 FGD1P98174 961 aa17.23■□□□□ 0.35
CHD1-212ENST00000614616 PDE4AP27815 886 aa17.23■□□□□ 0.35
CHD1-212ENST00000614616 KCNJ4P48050 445 aa17.22■□□□□ 0.35
CHD1-212ENST00000614616 FAM161AQ3B820 660 aa17.22■□□□□ 0.35
CHD1-212ENST00000614616 CWC15Q9P013 229 aaKnown RBP17.22■□□□□ 0.35
CHD1-212ENST00000614616 KIF16BQ96L93 1317 aa17.22■□□□□ 0.35
CHD1-212ENST00000614616 CCNB3Q8WWL7 1395 aa17.21■□□□□ 0.35
CHD1-212ENST00000614616 RWDD1Q9H446 243 aaPredicted RBP17.2■□□□□ 0.34
CHD1-212ENST00000614616 CARD11Q9BXL7 1154 aa17.19■□□□□ 0.34
CHD1-212ENST00000614616 CENPQQ7L2Z9 268 aaPredicted RBP17.18■□□□□ 0.34
CHD1-212ENST00000614616 IL27Q8NEV9 243 aa17.18■□□□□ 0.34
CHD1-212ENST00000614616 MAPK8IP3Q9UPT6 1336 aa17.17■□□□□ 0.34
CHD1-212ENST00000614616 ARID3CA6NKF2 412 aa17.16■□□□□ 0.34
CHD1-212ENST00000614616 KTN1Q86UP2 1357 aaKnown RBP17.16■□□□□ 0.34
CHD1-212ENST00000614616 SETD5Q9C0A6 1442 aa17.15■□□□□ 0.34
CHD1-212ENST00000614616 MFAP1P55081 439 aaKnown RBP17.15■□□□□ 0.34
CHD1-212ENST00000614616 DDX49Q9Y6V7 483 aaKnown RBP17.14■□□□□ 0.33
CHD1-212ENST00000614616 PHLDB1Q86UU1 1377 aa17.14■□□□□ 0.33
CHD1-212ENST00000614616 NFKBIBQ15653 356 aa17.13■□□□□ 0.33
CHD1-212ENST00000614616 SIN3AQ96ST3 1273 aa17.13■□□□□ 0.33
CHD1-212ENST00000614616 RRP7BPQ9NSQ0 103 aa17.13■□□□□ 0.33
CHD1-212ENST00000614616 ZBED9Q6R2W3 1325 aa17.13■□□□□ 0.33
CHD1-212ENST00000614616 ST18O60284 1047 aa17.13■□□□□ 0.33
CHD1-212ENST00000614616 MRE11P49959 708 aa17.13■□□□□ 0.33
CHD1-212ENST00000614616 CC2D1BQ5T0F9 858 aaKnown RBP17.12■□□□□ 0.33
CHD1-212ENST00000614616 DIAPH3Q9NSV4 1193 aa17.12■□□□□ 0.33
CHD1-212ENST00000614616 KIAA1211Q6ZU35 1233 aa17.11■□□□□ 0.33
CHD1-212ENST00000614616 CHGAP10645 457 aaKnown RBP17.11■□□□□ 0.33
CHD1-212ENST00000614616 RALBP1Q15311 655 aa17.11■□□□□ 0.33
CHD1-212ENST00000614616 IPO8O15397 1037 aaKnown RBP17.1■□□□□ 0.33
CHD1-212ENST00000614616 NAP1L2Q9ULW6 460 aaPredicted RBP17.1■□□□□ 0.33
CHD1-212ENST00000614616 PDE3BQ13370 1112 aa17.1■□□□□ 0.33
CHD1-212ENST00000614616 BRPF3Q9ULD4 1205 aa17.1■□□□□ 0.33
CHD1-212ENST00000614616 NEUROD2Q15784 382 aa17.09■□□□□ 0.33
CHD1-212ENST00000614616 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.09■□□□□ 0.333e-6■□□□□ 11.3
CHD1-212ENST00000614616 CCDC39Q9UFE4 941 aa17.08■□□□□ 0.32
CHD1-212ENST00000614616 NASPP49321 788 aaPredicted RBP17.07■□□□□ 0.32
CHD1-212ENST00000614616 ARGLU1Q9NWB6 273 aaPredicted RBP17.07■□□□□ 0.32
CHD1-212ENST00000614616 TSPY4P0CV99 314 aa17.07■□□□□ 0.32
CHD1-212ENST00000614616 TSPY10P0CW01 314 aa17.07■□□□□ 0.32
CHD1-212ENST00000614616 R3HCC1Q9Y3T6 440 aaKnown RBP17.07■□□□□ 0.32
CHD1-212ENST00000614616 CCDC70Q6NSX1 233 aa17.07■□□□□ 0.32
CHD1-212ENST00000614616 GNL2Q13823 731 aaKnown RBP17.06■□□□□ 0.32
CHD1-212ENST00000614616 GOLGA6L19H0YKK7 550 aa17.06■□□□□ 0.32
CHD1-212ENST00000614616 OS9Q13438 667 aaPredicted RBP17.06■□□□□ 0.32
CHD1-212ENST00000614616 STAG3Q9UJ98 1225 aa17.04■□□□□ 0.32
CHD1-212ENST00000614616 HMGN5P82970 282 aaKnown RBP17.04■□□□□ 0.32
CHD1-212ENST00000614616 RDXP35241 583 aaKnown RBP17.04■□□□□ 0.32
CHD1-212ENST00000614616 SLC4A3P48751 1232 aa17.04■□□□□ 0.32
CHD1-212ENST00000614616 CCDC34Q96HJ3 373 aa17.03■□□□□ 0.32
CHD1-212ENST00000614616 ATP6V1DQ9Y5K8 247 aa17.03■□□□□ 0.32
CHD1-212ENST00000614616 TPM3P06753 285 aa17.02■□□□□ 0.32
CHD1-212ENST00000614616 ZNF592Q92610 1267 aa17.02■□□□□ 0.32
CHD1-212ENST00000614616 CHMP5Q9NZZ3 219 aa17.02■□□□□ 0.32
CHD1-212ENST00000614616 CCDC173Q0VFZ6 552 aa17.01■□□□□ 0.31
CHD1-212ENST00000614616 FHAD1B1AJZ9 1412 aa17■□□□□ 0.31
CHD1-212ENST00000614616 HSPA5P11021 654 aaKnown RBP17■□□□□ 0.31
CHD1-212ENST00000614616 PDE4CQ08493 712 aa17■□□□□ 0.31
CHD1-212ENST00000614616 ACBD3Q9H3P7 528 aa17■□□□□ 0.31
CHD1-212ENST00000614616 RRP1P56182 461 aaKnown RBP17■□□□□ 0.31
CHD1-212ENST00000614616 TMF1P82094 1093 aa17■□□□□ 0.31
CHD1-212ENST00000614616 ARHGAP35Q9NRY4 1499 aa17■□□□□ 0.31
CHD1-212ENST00000614616 HAP1P54257 671 aaPredicted RBP16.98■□□□□ 0.31
CHD1-212ENST00000614616 ITPRIPQ8IWB1 547 aa16.98■□□□□ 0.31
CHD1-212ENST00000614616 ROCK2O75116 1388 aaKnown RBP16.98■□□□□ 0.31
CHD1-212ENST00000614616 VPS8Q8N3P4 1428 aa16.97■□□□□ 0.31
CHD1-212ENST00000614616 CCAR2Q8N163 923 aaKnown RBP16.97■□□□□ 0.31
CHD1-212ENST00000614616 FOXD4L1Q9NU39 408 aa16.97■□□□□ 0.31
CHD1-212ENST00000614616 TSPYL1Q9H0U9 437 aa16.96■□□□□ 0.31
CHD1-212ENST00000614616 ISY1Q9ULR0 285 aaKnown RBP16.96■□□□□ 0.31
CHD1-212ENST00000614616 AK7Q96M32 723 aa16.95■□□□□ 0.3
CHD1-212ENST00000614616 PDCL3Q9H2J4 239 aa16.95■□□□□ 0.3
CHD1-212ENST00000614616 TAOK2Q9UL54 1235 aa16.95■□□□□ 0.3
CHD1-212ENST00000614616 RBM10P98175 930 aaKnown RBP16.95■□□□□ 0.3
CHD1-212ENST00000614616 LEKR1Q6ZMV7 388 aa16.94■□□□□ 0.3
CHD1-212ENST00000614616 KCNH8Q96L42 1107 aa16.94■□□□□ 0.3
CHD1-212ENST00000614616 HSP90B2PQ58FF3 399 aa16.94■□□□□ 0.3
CHD1-212ENST00000614616 RAB3GAP2Q9H2M9 1393 aa16.94■□□□□ 0.3
CHD1-212ENST00000614616 FBLN2P98095 1184 aa16.94■□□□□ 0.3
CHD1-212ENST00000614616 ZMYND15Q9H091 742 aa16.93■□□□□ 0.3
CHD1-212ENST00000614616 BAZ1AQ9NRL2 1556 aaPredicted RBP16.92■□□□□ 0.3
CHD1-212ENST00000614616 UQCRHLA0A096LP55 91 aa16.92■□□□□ 0.3
CHD1-212ENST00000614616 UQCRHP07919 91 aa16.92■□□□□ 0.3
CHD1-212ENST00000614616 KIF15Q9NS87 1388 aa16.92■□□□□ 0.3
CHD1-212ENST00000614616 GOLGA2Q08379 1002 aa16.92■□□□□ 0.3
CHD1-212ENST00000614616 BECN2A8MW95 431 aa16.91■□□□□ 0.3
CHD1-212ENST00000614616 DEF6Q9H4E7 631 aa16.91■□□□□ 0.3
CHD1-212ENST00000614616 TSR1Q2NL82 804 aaKnown RBP16.91■□□□□ 0.3
CHD1-212ENST00000614616 TULP1O00294 542 aaPredicted RBP16.9■□□□□ 0.3
CHD1-212ENST00000614616 IFT57Q9NWB7 429 aa16.9■□□□□ 0.3
CHD1-212ENST00000614616 TRAK2O60296 914 aa16.9■□□□□ 0.3
CHD1-212ENST00000614616 HOMER1Q86YM7 354 aa16.9■□□□□ 0.3
CHD1-212ENST00000614616 NUCB2P80303 420 aa16.9■□□□□ 0.3
CHD1-212ENST00000614616 H0YHG0 523 aa16.9■□□□□ 0.3
CHD1-212ENST00000614616 TPM1P09493 284 aa16.89■□□□□ 0.29
CHD1-212ENST00000614616 CENPJQ9HC77 1338 aaPredicted RBP16.89■□□□□ 0.29
CHD1-212ENST00000614616 RGL3Q3MIN7 710 aa16.89■□□□□ 0.29
CHD1-212ENST00000614616 RRP12Q5JTH9 1297 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms