RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 PTPN23Q9H3S7 1636 aa9.65□□□□□ -0.87
CBWD3-210ENST00000614398 PLCH2O75038 1416 aa9.64□□□□□ -0.87
CBWD3-210ENST00000614398 CCNB3Q8WWL7 1395 aa9.64□□□□□ -0.87
CBWD3-210ENST00000614398 PLEKHH2Q8IVE3 1493 aa9.63□□□□□ -0.87
CBWD3-210ENST00000614398 ARHGEF5Q12774 1597 aa9.63□□□□□ -0.87
CBWD3-210ENST00000614398 PPRC1Q5VV67 1664 aaKnown RBP9.62□□□□□ -0.87
CBWD3-210ENST00000614398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.62□□□□□ -0.87
CBWD3-210ENST00000614398 HNRNPUL2Q1KMD3 747 aaKnown RBP9.62□□□□□ -0.87
CBWD3-210ENST00000614398 NEO1Q92859 1461 aa9.61□□□□□ -0.87
CBWD3-210ENST00000614398 SAMD9LQ8IVG5 1584 aa9.61□□□□□ -0.87
CBWD3-210ENST00000614398 CROCC2H7BZ55 1655 aa9.61□□□□□ -0.87
CBWD3-210ENST00000614398 KIAA1107Q9UPP5 1409 aa9.61□□□□□ -0.87
CBWD3-210ENST00000614398 DNMT1P26358 1616 aaKnown RBP9.61□□□□□ -0.87
CBWD3-210ENST00000614398 ABCC1P33527 1531 aa9.6□□□□□ -0.87
CBWD3-210ENST00000614398 ARID3CA6NKF2 412 aa9.6□□□□□ -0.87
CBWD3-210ENST00000614398 CAMSAP2Q08AD1 1489 aa9.6□□□□□ -0.87
CBWD3-210ENST00000614398 MAST1Q9Y2H9 1570 aa9.59□□□□□ -0.87
CBWD3-210ENST00000614398 SHANK2Q9UPX8 1470 aa9.59□□□□□ -0.87
CBWD3-210ENST00000614398 ARHGAP5Q13017 1502 aa9.59□□□□□ -0.87
CBWD3-210ENST00000614398 TEX14Q8IWB6 1497 aa9.58□□□□□ -0.88
CBWD3-210ENST00000614398 CD109Q6YHK3 1445 aa9.58□□□□□ -0.88
CBWD3-210ENST00000614398 AKNAQ7Z591 1439 aa9.57□□□□□ -0.88
CBWD3-210ENST00000614398 TRIM26Q12899 539 aaPredicted RBP9.57□□□□□ -0.88
CBWD3-210ENST00000614398 ADGBQ8N7X0 1667 aa9.57□□□□□ -0.88
CBWD3-210ENST00000614398 FANCAO15360 1455 aa9.56□□□□□ -0.88
CBWD3-210ENST00000614398 MBD5Q9P267 1494 aa9.56□□□□□ -0.88
CBWD3-210ENST00000614398 ADGRL2O95490 1459 aa9.55□□□□□ -0.88
CBWD3-210ENST00000614398 EFCAB2Q5VUJ9 269 aa9.55□□□□□ -0.88
CBWD3-210ENST00000614398 KDM5CP41229 1560 aa9.54□□□□□ -0.88
CBWD3-210ENST00000614398 RSPH4AQ5TD94 716 aa9.54□□□□□ -0.88
CBWD3-210ENST00000614398 CFDP1Q9UEE9 299 aaPredicted RBP9.54□□□□□ -0.88
CBWD3-210ENST00000614398 CCDC141Q6ZP82 1450 aa9.54□□□□□ -0.88
CBWD3-210ENST00000614398 PLXNC1O60486 1568 aa9.54□□□□□ -0.88
CBWD3-210ENST00000614398 SYCP2Q9BX26 1530 aa9.54□□□□□ -0.88
CBWD3-210ENST00000614398 KCNH8Q96L42 1107 aa9.54□□□□□ -0.88
CBWD3-210ENST00000614398 DAPK1P53355 1430 aa9.53□□□□□ -0.88
CBWD3-210ENST00000614398 ZMYM4Q5VZL5 1548 aa9.53□□□□□ -0.88
CBWD3-210ENST00000614398 GCC2Q8IWJ2 1684 aa9.53□□□□□ -0.88
CBWD3-210ENST00000614398 RICTORQ6R327 1708 aa9.53□□□□□ -0.88
CBWD3-210ENST00000614398 INO80Q9ULG1 1556 aaPredicted RBP9.53□□□□□ -0.88
CBWD3-210ENST00000614398 ROCK1Q13464 1354 aa9.53□□□□□ -0.88
CBWD3-210ENST00000614398 PPARGC1BQ86YN6 1023 aaKnown RBP9.53□□□□□ -0.88
CBWD3-210ENST00000614398 ARHGEF12Q9NZN5 1544 aa9.53□□□□□ -0.88
CBWD3-210ENST00000614398 ABCC5O15440 1437 aa9.52□□□□□ -0.89
CBWD3-210ENST00000614398 ADGRL1O94910 1474 aa9.52□□□□□ -0.89
CBWD3-210ENST00000614398 RTEL1-TNFRSF6BF6WH68 1400 aa9.52□□□□□ -0.89
CBWD3-210ENST00000614398 FRMPD1Q5SYB0 1578 aa9.51□□□□□ -0.89
CBWD3-210ENST00000614398 POGZQ7Z3K3 1410 aa9.51□□□□□ -0.89
CBWD3-210ENST00000614398 FAM69CQ0P6D2 419 aa9.51□□□□□ -0.89
CBWD3-210ENST00000614398 ZNF518AQ6AHZ1 1483 aa9.5□□□□□ -0.89
CBWD3-210ENST00000614398 ZFYVE16Q7Z3T8 1539 aa9.5□□□□□ -0.89
CBWD3-210ENST00000614398 MLH3Q9UHC1 1453 aa9.49□□□□□ -0.89
CBWD3-210ENST00000614398 TSPOAP1O95153 1857 aa9.49□□□□□ -0.89
CBWD3-210ENST00000614398 HECW2Q9P2P5 1572 aa9.49□□□□□ -0.89
CBWD3-210ENST00000614398 PTPRKQ15262 1439 aa9.49□□□□□ -0.89
CBWD3-210ENST00000614398 DENND4BO75064 1496 aaPredicted RBP9.48□□□□□ -0.89
CBWD3-210ENST00000614398 MAGI2Q86UL8 1455 aa9.48□□□□□ -0.89
CBWD3-210ENST00000614398 BCORL1Q5H9F3 1711 aa9.48□□□□□ -0.89
CBWD3-210ENST00000614398 REREQ9P2R6 1566 aa9.48□□□□□ -0.89
CBWD3-210ENST00000614398 HFM1A2PYH4 1435 aa9.48□□□□□ -0.89
CBWD3-210ENST00000614398 C9orf84Q5VXU9 1444 aa9.48□□□□□ -0.89
CBWD3-210ENST00000614398 SCAPERQ9BY12 1400 aa9.48□□□□□ -0.89
CBWD3-210ENST00000614398 ACIN1Q9UKV3 1341 aaKnown RBP9.47□□□□□ -0.89
CBWD3-210ENST00000614398 TRAPPC8Q9Y2L5 1435 aa9.47□□□□□ -0.89
CBWD3-210ENST00000614398 KIDINS220Q9ULH0 1771 aa9.47□□□□□ -0.89
CBWD3-210ENST00000614398 ATP7AQ04656 1500 aa9.47□□□□□ -0.89
CBWD3-210ENST00000614398 ZNF644Q9H582 1327 aaPredicted RBP9.47□□□□□ -0.89
CBWD3-210ENST00000614398 EIF2AK4Q9P2K8 1649 aaKnown RBP9.46□□□□□ -0.89
CBWD3-210ENST00000614398 HRCP23327 699 aa9.45□□□□□ -0.9
CBWD3-210ENST00000614398 NCOA1Q15788 1441 aa9.45□□□□□ -0.9
CBWD3-210ENST00000614398 FAM50AQ14320 339 aaKnown RBP9.45□□□□□ -0.9
CBWD3-210ENST00000614398 DUOX2Q9NRD8 1548 aa9.45□□□□□ -0.9
CBWD3-210ENST00000614398 ANKRD30AQ9BXX3 1397 aa9.44□□□□□ -0.9
CBWD3-210ENST00000614398 ARHGEF40Q8TER5 1519 aa9.44□□□□□ -0.9
CBWD3-210ENST00000614398 NAIPQ13075 1403 aa9.44□□□□□ -0.9
CBWD3-210ENST00000614398 DIP2CQ9Y2E4 1556 aa9.43□□□□□ -0.9
CBWD3-210ENST00000614398 ABCA6Q8N139 1617 aa9.43□□□□□ -0.9
CBWD3-210ENST00000614398 ERBINQ96RT1 1412 aa9.43□□□□□ -0.9
CBWD3-210ENST00000614398 ZNF777Q9ULD5 760 aaPredicted RBP9.42□□□□□ -0.9
CBWD3-210ENST00000614398 DEPDC5O75140 1603 aa9.42□□□□□ -0.9
CBWD3-210ENST00000614398 UNC13BO14795 1591 aa9.42□□□□□ -0.9
CBWD3-210ENST00000614398 SETD5Q9C0A6 1442 aa9.42□□□□□ -0.9
CBWD3-210ENST00000614398 KDM5DQ9BY66 1539 aa9.42□□□□□ -0.9
CBWD3-210ENST00000614398 HNRNPMP52272 730 aaKnown RBP eCLIP9.42□□□□□ -0.9
CBWD3-210ENST00000614398 KDM6BO15054 1643 aa9.42□□□□□ -0.9
CBWD3-210ENST00000614398 RNF17Q9BXT8 1623 aaKnown RBP9.41□□□□□ -0.9
CBWD3-210ENST00000614398 FAM135AQ9P2D6 1515 aa9.41□□□□□ -0.9
CBWD3-210ENST00000614398 TSPY4P0CV99 314 aa9.41□□□□□ -0.9
CBWD3-210ENST00000614398 TSPY10P0CW01 314 aa9.41□□□□□ -0.9
CBWD3-210ENST00000614398 COL17A1Q9UMD9 1497 aaPredicted RBP9.41□□□□□ -0.9
CBWD3-210ENST00000614398 AGLP35573 1532 aa9.41□□□□□ -0.9
CBWD3-210ENST00000614398 SPAG9O60271 1321 aaKnown RBP9.4□□□□□ -0.9
CBWD3-210ENST00000614398 KIF15Q9NS87 1388 aa9.39□□□□□ -0.91
CBWD3-210ENST00000614398 VWDEQ8N2E2 1590 aa9.38□□□□□ -0.91
CBWD3-210ENST00000614398 ANKRD50Q9ULJ7 1429 aa9.37□□□□□ -0.91
CBWD3-210ENST00000614398 ATP10AO60312 1499 aa9.37□□□□□ -0.91
CBWD3-210ENST00000614398 A2MP01023 1474 aa9.37□□□□□ -0.91
CBWD3-210ENST00000614398 PRDM15P57071 1507 aaPredicted RBP9.37□□□□□ -0.91
CBWD3-210ENST00000614398 DHX29Q7Z478 1369 aaKnown RBP9.37□□□□□ -0.91
CBWD3-210ENST00000614398 AFAP1Q8N556 730 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms