RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 SCAPERQ9BY12 1400 aa12.9□□□□□ -0.34
PSMB3-208ENST00000613870 EFCAB2Q5VUJ9 269 aa12.9□□□□□ -0.34
PSMB3-208ENST00000613870 CDC42BPBQ9Y5S2 1711 aa12.9□□□□□ -0.34
PSMB3-208ENST00000613870 KANK4Q5T7N3 995 aaPredicted RBP12.89□□□□□ -0.35
PSMB3-208ENST00000613870 ZMYM4Q5VZL5 1548 aa12.88□□□□□ -0.35
PSMB3-208ENST00000613870 MTUS2Q5JR59 1369 aa12.88□□□□□ -0.35
PSMB3-208ENST00000613870 TIAM1Q13009 1591 aa12.88□□□□□ -0.35
PSMB3-208ENST00000613870 ARHGEF40Q8TER5 1519 aa12.88□□□□□ -0.35
PSMB3-208ENST00000613870 ADAMTSL3P82987 1691 aa12.87□□□□□ -0.35
PSMB3-208ENST00000613870 ARHGAP5Q13017 1502 aa12.87□□□□□ -0.35
PSMB3-208ENST00000613870 POGZQ7Z3K3 1410 aa12.87□□□□□ -0.35
PSMB3-208ENST00000613870 YEATS2Q9ULM3 1422 aa12.87□□□□□ -0.35
PSMB3-208ENST00000613870 BCORL1Q5H9F3 1711 aa12.86□□□□□ -0.35
PSMB3-208ENST00000613870 MAGI2Q86UL8 1455 aa12.85□□□□□ -0.35
PSMB3-208ENST00000613870 SIGLEC1Q9BZZ2 1709 aa12.85□□□□□ -0.35
PSMB3-208ENST00000613870 MAP3K1Q13233 1512 aa12.85□□□□□ -0.35
PSMB3-208ENST00000613870 TRIM26Q12899 539 aaPredicted RBP12.85□□□□□ -0.35
PSMB3-208ENST00000613870 ARID4BQ4LE39 1312 aaPredicted RBP12.85□□□□□ -0.35
PSMB3-208ENST00000613870 CDC42BPAQ5VT25 1732 aa12.85□□□□□ -0.35
PSMB3-208ENST00000613870 PREX2Q70Z35 1606 aa12.84□□□□□ -0.35
PSMB3-208ENST00000613870 ZFYVE16Q7Z3T8 1539 aa12.84□□□□□ -0.35
PSMB3-208ENST00000613870 LRRC9Q6ZRR7 1453 aa12.84□□□□□ -0.35
PSMB3-208ENST00000613870 AFAP1Q8N556 730 aa12.83□□□□□ -0.36
PSMB3-208ENST00000613870 PCGF6Q9BYE7 350 aa12.82□□□□□ -0.36
PSMB3-208ENST00000613870 MADDQ8WXG6 1647 aa12.81□□□□□ -0.36
PSMB3-208ENST00000613870 PTPRMP28827 1452 aa12.81□□□□□ -0.36
PSMB3-208ENST00000613870 ZNF518AQ6AHZ1 1483 aa12.81□□□□□ -0.36
PSMB3-208ENST00000613870 ARHGEF12Q9NZN5 1544 aa12.81□□□□□ -0.36
PSMB3-208ENST00000613870 KDM5CP41229 1560 aa12.81□□□□□ -0.36
PSMB3-208ENST00000613870 GPATCH8Q9UKJ3 1502 aaKnown RBP12.8□□□□□ -0.36
PSMB3-208ENST00000613870 TRAPPC8Q9Y2L5 1435 aa12.79□□□□□ -0.36
PSMB3-208ENST00000613870 ATP10AO60312 1499 aa12.79□□□□□ -0.36
PSMB3-208ENST00000613870 ABCC1P33527 1531 aa12.79□□□□□ -0.36
PSMB3-208ENST00000613870 HECW2Q9P2P5 1572 aa12.79□□□□□ -0.36
PSMB3-208ENST00000613870 ITSN2Q9NZM3 1697 aa12.79□□□□□ -0.36
PSMB3-208ENST00000613870 EHBP1L1Q8N3D4 1523 aa12.78□□□□□ -0.36
PSMB3-208ENST00000613870 RIMS1Q86UR5 1692 aaKnown RBP12.77□□□□□ -0.36
PSMB3-208ENST00000613870 ZNF777Q9ULD5 760 aaPredicted RBP12.77□□□□□ -0.37
PSMB3-208ENST00000613870 MLH3Q9UHC1 1453 aa12.77□□□□□ -0.37
PSMB3-208ENST00000613870 SAMD9LQ8IVG5 1584 aa12.77□□□□□ -0.37
PSMB3-208ENST00000613870 MLECQ14165 292 aa12.76□□□□□ -0.37
PSMB3-208ENST00000613870 C9orf84Q5VXU9 1444 aa12.76□□□□□ -0.37
PSMB3-208ENST00000613870 DIP2CQ9Y2E4 1556 aa12.76□□□□□ -0.37
PSMB3-208ENST00000613870 CCNB3Q8WWL7 1395 aa12.75□□□□□ -0.37
PSMB3-208ENST00000613870 KIDINS220Q9ULH0 1771 aa12.74□□□□□ -0.37
PSMB3-208ENST00000613870 ABCA6Q8N139 1617 aa12.74□□□□□ -0.37
PSMB3-208ENST00000613870 HNRNPMP52272 730 aaKnown RBP eCLIP12.74□□□□□ -0.37
PSMB3-208ENST00000613870 CFDP1Q9UEE9 299 aaPredicted RBP12.74□□□□□ -0.37
PSMB3-208ENST00000613870 MYT1LQ9UL68 1186 aa12.74□□□□□ -0.37
PSMB3-208ENST00000613870 SUPT6HQ7KZ85 1726 aaKnown RBP12.74□□□□□ -0.37
PSMB3-208ENST00000613870 FAM50AQ14320 339 aaKnown RBP12.73□□□□□ -0.37
PSMB3-208ENST00000613870 FER1L4A9Z1Z3 1794 aa12.73□□□□□ -0.37
PSMB3-208ENST00000613870 SYCP2Q9BX26 1530 aa12.72□□□□□ -0.37
PSMB3-208ENST00000613870 NCOA2Q15596 1464 aa12.72□□□□□ -0.37
PSMB3-208ENST00000613870 REREQ9P2R6 1566 aa12.72□□□□□ -0.37
PSMB3-208ENST00000613870 KIAA1107Q9UPP5 1409 aa12.71□□□□□ -0.38
PSMB3-208ENST00000613870 ZNF644Q9H582 1327 aaPredicted RBP12.7□□□□□ -0.38
PSMB3-208ENST00000613870 ITGAEP38570 1179 aa12.7□□□□□ -0.38
PSMB3-208ENST00000613870 PLPPR3Q6T4P5 718 aa12.7□□□□□ -0.38
PSMB3-208ENST00000613870 PLEKHH2Q8IVE3 1493 aa12.69□□□□□ -0.38
PSMB3-208ENST00000613870 AGLP35573 1532 aa12.67□□□□□ -0.38
PSMB3-208ENST00000613870 SPAG9O60271 1321 aaKnown RBP12.67□□□□□ -0.38
PSMB3-208ENST00000613870 LMTK3Q96Q04 1460 aa12.67□□□□□ -0.38
PSMB3-208ENST00000613870 MBD5Q9P267 1494 aa12.66□□□□□ -0.38
PSMB3-208ENST00000613870 MYOM3Q5VTT5 1437 aa12.66□□□□□ -0.38
PSMB3-208ENST00000613870 CEBPAP49715 358 aaPredicted RBP12.66□□□□□ -0.38
PSMB3-208ENST00000613870 ATP7AQ04656 1500 aa12.66□□□□□ -0.38
PSMB3-208ENST00000613870 INO80Q9ULG1 1556 aaPredicted RBP12.65□□□□□ -0.38
PSMB3-208ENST00000613870 FGD6Q6ZV73 1430 aa12.64□□□□□ -0.39
PSMB3-208ENST00000613870 RRBP1Q9P2E9 1410 aaKnown RBP12.63□□□□□ -0.39
PSMB3-208ENST00000613870 CAMSAP2Q08AD1 1489 aa12.62□□□□□ -0.39
PSMB3-208ENST00000613870 HSPA2P54652 639 aa12.62□□□□□ -0.39
PSMB3-208ENST00000613870 SETD1BQ9UPS6 1966 aaKnown RBP12.61□□□□□ -0.39
PSMB3-208ENST00000613870 C3P01024 1663 aa12.61□□□□□ -0.39
PSMB3-208ENST00000613870 PLXNC1O60486 1568 aa12.61□□□□□ -0.39
PSMB3-208ENST00000613870 A2MP01023 1474 aa12.61□□□□□ -0.39
PSMB3-208ENST00000613870 RTEL1-TNFRSF6BF6WH68 1400 aa12.6□□□□□ -0.39
PSMB3-208ENST00000613870 MIA2Q96PC5 1412 aa12.6□□□□□ -0.39
PSMB3-208ENST00000613870 ADGBQ8N7X0 1667 aa12.6□□□□□ -0.39
PSMB3-208ENST00000613870 PREX1Q8TCU6 1659 aa12.6□□□□□ -0.39
PSMB3-208ENST00000613870 CCDC141Q6ZP82 1450 aa12.59□□□□□ -0.39
PSMB3-208ENST00000613870 PTPN23Q9H3S7 1636 aa12.59□□□□□ -0.39
PSMB3-208ENST00000613870 RSPH4AQ5TD94 716 aa12.58□□□□□ -0.4
PSMB3-208ENST00000613870 ESF1Q9H501 851 aaKnown RBP12.58□□□□□ -0.4
PSMB3-208ENST00000613870 ARHGEF5Q12774 1597 aa12.56□□□□□ -0.4
PSMB3-208ENST00000613870 CNTLNQ9NXG0 1405 aa12.56□□□□□ -0.4
PSMB3-208ENST00000613870 GGT6Q6P531 493 aa12.56□□□□□ -0.4
PSMB3-208ENST00000613870 DHX29Q7Z478 1369 aaKnown RBP12.56□□□□□ -0.4
PSMB3-208ENST00000613870 MROH2AA6NES4 1674 aa12.55□□□□□ -0.4
PSMB3-208ENST00000613870 CLTCQ00610 1675 aaKnown RBP12.55□□□□□ -0.4
PSMB3-208ENST00000613870 ZMYM3Q14202 1370 aa12.55□□□□□ -0.4
PSMB3-208ENST00000613870 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.55□□□□□ -0.47e-7■■■■■ 52.8
PSMB3-208ENST00000613870 TSPY4P0CV99 314 aa12.54□□□□□ -0.4
PSMB3-208ENST00000613870 TSPY10P0CW01 314 aa12.54□□□□□ -0.4
PSMB3-208ENST00000613870 ILDR1Q86SU0 546 aaPredicted RBP12.54□□□□□ -0.4
PSMB3-208ENST00000613870 UHRF1BP1Q6BDS2 1440 aa12.54□□□□□ -0.4
PSMB3-208ENST00000613870 TCOF1Q13428 1488 aaKnown RBP12.53□□□□□ -0.4
PSMB3-208ENST00000613870 CHIC2Q9UKJ5 165 aa12.53□□□□□ -0.4
PSMB3-208ENST00000613870 STRCQ7RTU9 1775 aa12.51□□□□□ -0.41
PSMB3-208ENST00000613870 PPP6R1Q9UPN7 881 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms