RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 KCNH8Q96L42 1107 aa8.74□□□□□ -1.01
CLCN3-211ENST00000613795 FMN1Q68DA7 1419 aa8.74□□□□□ -1.01
CLCN3-211ENST00000613795 MAPK8IP3Q9UPT6 1336 aa8.74□□□□□ -1.01
CLCN3-211ENST00000613795 MAP7D2Q96T17 732 aa8.74□□□□□ -1.01
CLCN3-211ENST00000613795 CUX2O14529 1486 aa8.73□□□□□ -1.01
CLCN3-211ENST00000613795 TOP2AP11388 1531 aaKnown RBP8.73□□□□□ -1.01
CLCN3-211ENST00000613795 AEBP2Q6ZN18 517 aaPredicted RBP8.73□□□□□ -1.01
CLCN3-211ENST00000613795 PLCB2Q00722 1185 aa8.73□□□□□ -1.01
CLCN3-211ENST00000613795 MTERF4Q7Z6M4 381 aaKnown RBP8.72□□□□□ -1.01
CLCN3-211ENST00000613795 KLHL34Q8N239 644 aa8.72□□□□□ -1.01
CLCN3-211ENST00000613795 ANO8Q9HCE9 1232 aaPredicted RBP8.72□□□□□ -1.01
CLCN3-211ENST00000613795 TMF1P82094 1093 aa8.72□□□□□ -1.01
CLCN3-211ENST00000613795 EIF4G1Q04637 1599 aaKnown RBP8.71□□□□□ -1.01
CLCN3-211ENST00000613795 VPS8Q8N3P4 1428 aa8.71□□□□□ -1.02
CLCN3-211ENST00000613795 SYAP1Q96A49 352 aaPredicted RBP8.71□□□□□ -1.02
CLCN3-211ENST00000613795 DDX11L8A8MPP1 907 aa8.7□□□□□ -1.02
CLCN3-211ENST00000613795 FTSJ3Q8IY81 847 aaKnown RBP8.7□□□□□ -1.02
CLCN3-211ENST00000613795 CHMP4AQ9BY43 222 aa8.7□□□□□ -1.02
CLCN3-211ENST00000613795 SETD5Q9C0A6 1442 aa8.7□□□□□ -1.02
CLCN3-211ENST00000613795 ABCC8Q09428 1581 aa8.69□□□□□ -1.02
CLCN3-211ENST00000613795 POGKQ9P215 609 aa8.69□□□□□ -1.02
CLCN3-211ENST00000613795 RSPH4AQ5TD94 716 aa8.69□□□□□ -1.02
CLCN3-211ENST00000613795 GZF1Q9H116 711 aaPredicted RBP8.68□□□□□ -1.02
CLCN3-211ENST00000613795 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.68□□□□□ -1.02
CLCN3-211ENST00000613795 CCDC88BA6NC98 1476 aa8.67□□□□□ -1.02
CLCN3-211ENST00000613795 TPM2P07951 284 aa8.67□□□□□ -1.02
CLCN3-211ENST00000613795 CSPP1Q1MSJ5 1256 aa8.67□□□□□ -1.02
CLCN3-211ENST00000613795 SKOR2Q2VWA4 1001 aaPredicted RBP8.67□□□□□ -1.02
CLCN3-211ENST00000613795 EIF3AQ14152 1382 aaKnown RBP8.67□□□□□ -1.02
CLCN3-211ENST00000613795 FAM43AQ8N2R8 423 aa8.67□□□□□ -1.02
CLCN3-211ENST00000613795 DRC7Q8IY82 874 aa8.67□□□□□ -1.02
CLCN3-211ENST00000613795 UBE2Q2Q8WVN8 375 aa8.66□□□□□ -1.02
CLCN3-211ENST00000613795 CALD1Q05682 793 aaKnown RBP8.66□□□□□ -1.02
CLCN3-211ENST00000613795 SLKQ9H2G2 1235 aaPredicted RBP8.66□□□□□ -1.02
CLCN3-211ENST00000613795 SETQ01105 290 aaPredicted RBP8.65□□□□□ -1.02
CLCN3-211ENST00000613795 RGL3Q3MIN7 710 aa8.65□□□□□ -1.02
CLCN3-211ENST00000613795 ZNF771Q7L3S4 317 aaPredicted RBP8.65□□□□□ -1.02
CLCN3-211ENST00000613795 ANKRD30AQ9BXX3 1397 aa8.65□□□□□ -1.03
CLCN3-211ENST00000613795 RCAN3Q9UKA8 241 aa8.65□□□□□ -1.03
CLCN3-211ENST00000613795 SOGA1O94964 1423 aa8.64□□□□□ -1.03
CLCN3-211ENST00000613795 A0A0U1RQG5 324 aaPredicted RBP8.64□□□□□ -1.03
CLCN3-211ENST00000613795 CECR2Q9BXF3 1484 aa8.64□□□□□ -1.03
CLCN3-211ENST00000613795 GOLGA6L4A6NEF3 574 aa8.64□□□□□ -1.03
CLCN3-211ENST00000613795 RRP9O43818 475 aaKnown RBP8.64□□□□□ -1.03
CLCN3-211ENST00000613795 MCCP23508 829 aa8.63□□□□□ -1.03
CLCN3-211ENST00000613795 GOLGA6L1Q8N7Z2 621 aa8.63□□□□□ -1.03
CLCN3-211ENST00000613795 PHF14O94880 888 aa8.63□□□□□ -1.03
CLCN3-211ENST00000613795 PDE4AP27815 886 aa8.63□□□□□ -1.03
CLCN3-211ENST00000613795 CCDC18Q5T9S5 1454 aa8.63□□□□□ -1.03
CLCN3-211ENST00000613795 RAPGEF2Q9Y4G8 1499 aa8.62□□□□□ -1.03
CLCN3-211ENST00000613795 MROH2BQ7Z745 1585 aa8.62□□□□□ -1.03
CLCN3-211ENST00000613795 SPRYD3Q8NCJ5 442 aa8.62□□□□□ -1.03
CLCN3-211ENST00000613795 ZBTB7CA1YPR0 619 aa8.62□□□□□ -1.03
CLCN3-211ENST00000613795 RALBP1Q15311 655 aa8.62□□□□□ -1.03
CLCN3-211ENST00000613795 KTN1Q86UP2 1357 aaKnown RBP8.62□□□□□ -1.03
CLCN3-211ENST00000613795 ROCK2O75116 1388 aaKnown RBP8.61□□□□□ -1.03
CLCN3-211ENST00000613795 PDE3BQ13370 1112 aa8.61□□□□□ -1.03
CLCN3-211ENST00000613795 HDGFL2Q7Z4V5 671 aaPredicted RBP8.61□□□□□ -1.03
CLCN3-211ENST00000613795 EFCAB2Q5VUJ9 269 aa8.6□□□□□ -1.03
CLCN3-211ENST00000613795 HTATSF1O43719 755 aaKnown RBP8.6□□□□□ -1.03
CLCN3-211ENST00000613795 FAM161AQ3B820 660 aa8.6□□□□□ -1.03
CLCN3-211ENST00000613795 PMFBP1Q8TBY8 1022 aa8.6□□□□□ -1.03
CLCN3-211ENST00000613795 FAM13BQ9NYF5 915 aa8.6□□□□□ -1.03
CLCN3-211ENST00000613795 CALRP27797 417 aaKnown RBP8.6□□□□□ -1.03
CLCN3-211ENST00000613795 HDAC5Q9UQL6 1122 aa8.6□□□□□ -1.03
CLCN3-211ENST00000613795 FRAT1Q92837 279 aaPredicted RBP8.6□□□□□ -1.03
CLCN3-211ENST00000613795 RWDD1Q9H446 243 aaPredicted RBP8.6□□□□□ -1.03
CLCN3-211ENST00000613795 IPO8O15397 1037 aaKnown RBP8.59□□□□□ -1.03
CLCN3-211ENST00000613795 SIN3AQ96ST3 1273 aa8.59□□□□□ -1.03
CLCN3-211ENST00000613795 CADPSQ9ULU8 1353 aa8.59□□□□□ -1.03
CLCN3-211ENST00000613795 UACAQ9BZF9 1416 aa8.59□□□□□ -1.03
CLCN3-211ENST00000613795 CCDC66A2RUB6 948 aa8.59□□□□□ -1.03
CLCN3-211ENST00000613795 PHLDB1Q86UU1 1377 aa8.58□□□□□ -1.04
CLCN3-211ENST00000613795 TEX35Q5T0J7 233 aa8.58□□□□□ -1.04
CLCN3-211ENST00000613795 PLEKHG5O94827 1062 aa8.58□□□□□ -1.04
CLCN3-211ENST00000613795 CENPQQ7L2Z9 268 aaPredicted RBP8.57□□□□□ -1.04
CLCN3-211ENST00000613795 APPP05067 770 aa8.57□□□□□ -1.04
CLCN3-211ENST00000613795 MRE11P49959 708 aa8.57□□□□□ -1.04
CLCN3-211ENST00000613795 MORC1Q86VD1 984 aa8.57□□□□□ -1.04
CLCN3-211ENST00000613795 DCAF11Q8TEB1 546 aa8.57□□□□□ -1.04
CLCN3-211ENST00000613795 NOM1Q5C9Z4 860 aaKnown RBP8.57□□□□□ -1.04
CLCN3-211ENST00000613795 IL27Q8NEV9 243 aa8.57□□□□□ -1.04
CLCN3-211ENST00000613795 SMARCA4P51532 1647 aa8.56□□□□□ -1.04
CLCN3-211ENST00000613795 GPS2Q13227 327 aa8.56□□□□□ -1.04
CLCN3-211ENST00000613795 TAF3Q5VWG9 929 aa8.56□□□□□ -1.04
CLCN3-211ENST00000613795 TPM4P67936 248 aa8.56□□□□□ -1.04
CLCN3-211ENST00000613795 A0A0G2JS52 829 aa8.56□□□□□ -1.04
CLCN3-211ENST00000613795 OS9Q13438 667 aaPredicted RBP8.56□□□□□ -1.04
CLCN3-211ENST00000613795 NFKBIBQ15653 356 aa8.56□□□□□ -1.04
CLCN3-211ENST00000613795 RTF1Q92541 710 aaKnown RBP8.55□□□□□ -1.04
CLCN3-211ENST00000613795 ZBED9Q6R2W3 1325 aa8.55□□□□□ -1.04
CLCN3-211ENST00000613795 HSPA5P11021 654 aaKnown RBP8.55□□□□□ -1.04
CLCN3-211ENST00000613795 SRPK2P78362 688 aaKnown RBP8.54□□□□□ -1.04
CLCN3-211ENST00000613795 U2SURPO15042 1029 aaKnown RBP8.53□□□□□ -1.04
CLCN3-211ENST00000613795 SENP3-EIF4A1A0A087X0R7 540 aa8.53□□□□□ -1.04
CLCN3-211ENST00000613795 CHMP5Q9NZZ3 219 aa8.53□□□□□ -1.04
CLCN3-211ENST00000613795 ISY1Q9ULR0 285 aaKnown RBP8.53□□□□□ -1.04
CLCN3-211ENST00000613795 LMOD3Q0VAK6 560 aa8.53□□□□□ -1.04
CLCN3-211ENST00000613795 BRPF3Q9ULD4 1205 aa8.53□□□□□ -1.04
CLCN3-211ENST00000613795 DDX49Q9Y6V7 483 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms