RNA–Protein interactions for RNA: ENST00000613723.4

TMC4-207, Transcript of transmembrane channel like 4, humanhuman

TSL 1 (best)

Gene TMC4, Length 1,560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4-207ENST00000613723 NEO1Q92859 1461 aa31.89■■■□□ 2.7
TMC4-207ENST00000613723 CCNB3Q8WWL7 1395 aa31.87■■■□□ 2.69
TMC4-207ENST00000613723 ITSN2Q9NZM3 1697 aa31.85■■■□□ 2.69
TMC4-207ENST00000613723 GPATCH8Q9UKJ3 1502 aaKnown RBP31.84■■■□□ 2.69
TMC4-207ENST00000613723 EFCAB2Q5VUJ9 269 aa31.83■■■□□ 2.69
TMC4-207ENST00000613723 PHLDB1Q86UU1 1377 aa31.83■■■□□ 2.69
TMC4-207ENST00000613723 AKNAQ7Z591 1439 aa31.81■■■□□ 2.68
TMC4-207ENST00000613723 COL17A1Q9UMD9 1497 aaPredicted RBP31.78■■■□□ 2.68
TMC4-207ENST00000613723 CFDP1Q9UEE9 299 aaPredicted RBP31.76■■■□□ 2.67
TMC4-207ENST00000613723 ADGRL1O94910 1474 aa31.75■■■□□ 2.67
TMC4-207ENST00000613723 ZNF777Q9ULD5 760 aaPredicted RBP31.73■■■□□ 2.67
TMC4-207ENST00000613723 SAMD9LQ8IVG5 1584 aa31.69■■■□□ 2.66
TMC4-207ENST00000613723 PPARGC1BQ86YN6 1023 aaKnown RBP31.68■■■□□ 2.66
TMC4-207ENST00000613723 SCAPERQ9BY12 1400 aa31.68■■■□□ 2.66
TMC4-207ENST00000613723 RICTORQ6R327 1708 aa31.68■■■□□ 2.66
TMC4-207ENST00000613723 DENND4BO75064 1496 aaPredicted RBP31.67■■■□□ 2.66
TMC4-207ENST00000613723 ABCC1P33527 1531 aa31.66■■■□□ 2.66
TMC4-207ENST00000613723 RAPGEF3O95398 923 aa31.66■■■□□ 2.66
TMC4-207ENST00000613723 MYOM3Q5VTT5 1437 aa31.66■■■□□ 2.66
TMC4-207ENST00000613723 FRMPD1Q5SYB0 1578 aa31.63■■■□□ 2.65
TMC4-207ENST00000613723 POGZQ7Z3K3 1410 aa31.59■■■□□ 2.65
TMC4-207ENST00000613723 PLEKHH2Q8IVE3 1493 aa31.59■■■□□ 2.65
TMC4-207ENST00000613723 SYCP2Q9BX26 1530 aa31.59■■■□□ 2.65
TMC4-207ENST00000613723 ZNF644Q9H582 1327 aaPredicted RBP31.59■■■□□ 2.65
TMC4-207ENST00000613723 ARHGEF12Q9NZN5 1544 aa31.59■■■□□ 2.65
TMC4-207ENST00000613723 MIA2Q96PC5 1412 aa31.58■■■□□ 2.65
TMC4-207ENST00000613723 CAMSAP2Q08AD1 1489 aa31.57■■■□□ 2.64
TMC4-207ENST00000613723 ZNF518AQ6AHZ1 1483 aa31.56■■■□□ 2.64
TMC4-207ENST00000613723 KIAA1107Q9UPP5 1409 aa31.55■■■□□ 2.64
TMC4-207ENST00000613723 HNRNPMP52272 730 aaKnown RBP eCLIP31.54■■■□□ 2.64
TMC4-207ENST00000613723 TRAPPC8Q9Y2L5 1435 aa31.52■■■□□ 2.64
TMC4-207ENST00000613723 FGD6Q6ZV73 1430 aa31.51■■■□□ 2.64
TMC4-207ENST00000613723 AFAP1Q8N556 730 aa31.51■■■□□ 2.64
TMC4-207ENST00000613723 PTPN23Q9H3S7 1636 aa31.51■■■□□ 2.63
TMC4-207ENST00000613723 ZMYM4Q5VZL5 1548 aa31.51■■■□□ 2.63
TMC4-207ENST00000613723 KDM5CP41229 1560 aa31.5■■■□□ 2.63
TMC4-207ENST00000613723 MBD5Q9P267 1494 aa31.45■■■□□ 2.63
TMC4-207ENST00000613723 HECW2Q9P2P5 1572 aa31.44■■■□□ 2.62
TMC4-207ENST00000613723 MAGI2Q86UL8 1455 aa31.43■■■□□ 2.62
TMC4-207ENST00000613723 MYT1LQ9UL68 1186 aa31.43■■■□□ 2.62
TMC4-207ENST00000613723 ZFYVE16Q7Z3T8 1539 aa31.41■■■□□ 2.62
TMC4-207ENST00000613723 ARHGEF5Q12774 1597 aa31.41■■■□□ 2.62
TMC4-207ENST00000613723 TCOF1Q13428 1488 aaKnown RBP31.4■■■□□ 2.62
TMC4-207ENST00000613723 CCDC141Q6ZP82 1450 aa31.4■■■□□ 2.62
TMC4-207ENST00000613723 ARHGEF40Q8TER5 1519 aa31.39■■■□□ 2.62
TMC4-207ENST00000613723 RSPH4AQ5TD94 716 aa31.39■■■□□ 2.61
TMC4-207ENST00000613723 MLH3Q9UHC1 1453 aa31.38■■■□□ 2.61
TMC4-207ENST00000613723 KIDINS220Q9ULH0 1771 aa31.37■■■□□ 2.61
TMC4-207ENST00000613723 YEATS2Q9ULM3 1422 aa31.37■■■□□ 2.61
TMC4-207ENST00000613723 SPAG9O60271 1321 aaKnown RBP31.36■■■□□ 2.61
TMC4-207ENST00000613723 FAM50AQ14320 339 aaKnown RBP31.34■■■□□ 2.61
TMC4-207ENST00000613723 INO80Q9ULG1 1556 aaPredicted RBP31.33■■■□□ 2.61
TMC4-207ENST00000613723 ATP7AQ04656 1500 aa31.32■■■□□ 2.6
TMC4-207ENST00000613723 DNMT1P26358 1616 aaKnown RBP31.31■■■□□ 2.6
TMC4-207ENST00000613723 ABCA6Q8N139 1617 aa31.31■■■□□ 2.6
TMC4-207ENST00000613723 CROCC2H7BZ55 1655 aa31.3■■■□□ 2.6
TMC4-207ENST00000613723 TSPY4P0CV99 314 aa31.3■■■□□ 2.6
TMC4-207ENST00000613723 TSPY10P0CW01 314 aa31.3■■■□□ 2.6
TMC4-207ENST00000613723 DIP2CQ9Y2E4 1556 aa31.29■■■□□ 2.6
TMC4-207ENST00000613723 ATP10AO60312 1499 aa31.26■■■□□ 2.59
TMC4-207ENST00000613723 RTEL1-TNFRSF6BF6WH68 1400 aa31.25■■■□□ 2.59
TMC4-207ENST00000613723 DAPK1P53355 1430 aa31.25■■■□□ 2.59
TMC4-207ENST00000613723 ABCC5O15440 1437 aa31.24■■■□□ 2.59
TMC4-207ENST00000613723 RRBP1Q9P2E9 1410 aaKnown RBP31.23■■■□□ 2.59
TMC4-207ENST00000613723 MAST1Q9Y2H9 1570 aa31.23■■■□□ 2.59
TMC4-207ENST00000613723 C9orf84Q5VXU9 1444 aa31.22■■■□□ 2.59
TMC4-207ENST00000613723 ADGBQ8N7X0 1667 aa31.21■■■□□ 2.59
TMC4-207ENST00000613723 SIGLEC1Q9BZZ2 1709 aa31.2■■■□□ 2.58
TMC4-207ENST00000613723 SHANK2Q9UPX8 1470 aa31.2■■■□□ 2.58
TMC4-207ENST00000613723 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.18■■■□□ 2.58
TMC4-207ENST00000613723 ARID4BQ4LE39 1312 aaPredicted RBP31.17■■■□□ 2.58
TMC4-207ENST00000613723 REREQ9P2R6 1566 aa31.17■■■□□ 2.58
TMC4-207ENST00000613723 PLXNC1O60486 1568 aa31.13■■■□□ 2.57
TMC4-207ENST00000613723 A2MP01023 1474 aa31.12■■■□□ 2.57
TMC4-207ENST00000613723 CHIC2Q9UKJ5 165 aa31.12■■■□□ 2.57
TMC4-207ENST00000613723 ITGAEP38570 1179 aa31.11■■■□□ 2.57
TMC4-207ENST00000613723 BCORL1Q5H9F3 1711 aa31.07■■■□□ 2.56
TMC4-207ENST00000613723 PTPRKQ15262 1439 aa31.06■■■□□ 2.56
TMC4-207ENST00000613723 AGLP35573 1532 aa31.05■■■□□ 2.56
TMC4-207ENST00000613723 ANKRD30AQ9BXX3 1397 aa31.05■■■□□ 2.56
TMC4-207ENST00000613723 DHX29Q7Z478 1369 aaKnown RBP31.04■■■□□ 2.56
TMC4-207ENST00000613723 RRP7BPQ9NSQ0 103 aa31.03■■■□□ 2.56
TMC4-207ENST00000613723 ADGRL2O95490 1459 aa31.03■■■□□ 2.56
TMC4-207ENST00000613723 KIF15Q9NS87 1388 aa31.02■■■□□ 2.56
TMC4-207ENST00000613723 NCOA1Q15788 1441 aa31.02■■■□□ 2.56
TMC4-207ENST00000613723 MLECQ14165 292 aa31.01■■■□□ 2.56
TMC4-207ENST00000613723 DUOX2Q9NRD8 1548 aa31■■■□□ 2.55
TMC4-207ENST00000613723 ADAMTSL3P82987 1691 aa30.98■■■□□ 2.55
TMC4-207ENST00000613723 KDM4FA0A1W2PPD8 638 aa30.96■■■□□ 2.55
TMC4-207ENST00000613723 FER1L4A9Z1Z3 1794 aa30.94■■■□□ 2.54
TMC4-207ENST00000613723 ROCK1Q13464 1354 aa30.93■■■□□ 2.54
TMC4-207ENST00000613723 MADDQ8WXG6 1647 aa30.93■■■□□ 2.54
TMC4-207ENST00000613723 EIF2AK4Q9P2K8 1649 aaKnown RBP30.93■■■□□ 2.54
TMC4-207ENST00000613723 KIF3BO15066 747 aa30.92■■■□□ 2.54
TMC4-207ENST00000613723 ERBINQ96RT1 1412 aa30.91■■■□□ 2.54
TMC4-207ENST00000613723 GGT6Q6P531 493 aa30.89■■■□□ 2.54
TMC4-207ENST00000613723 RIMS1Q86UR5 1692 aaKnown RBP30.88■■■□□ 2.53
TMC4-207ENST00000613723 ANKRD50Q9ULJ7 1429 aa30.84■■■□□ 2.53
TMC4-207ENST00000613723 RNF17Q9BXT8 1623 aaKnown RBP30.84■■■□□ 2.53
TMC4-207ENST00000613723 ESF1Q9H501 851 aaKnown RBP30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms