RNA–Protein interactions for RNA: ENST00000613548.1

PCDH8-203, Transcript of protocadherin 8, humanhuman

TSL 2

Gene PCDH8, Length 744 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-203ENST00000613548 ARHGAP5Q13017 1502 aa24.35■■□□□ 1.49
PCDH8-203ENST00000613548 COL17A1Q9UMD9 1497 aaPredicted RBP24.34■■□□□ 1.49
PCDH8-203ENST00000613548 ABCC1P33527 1531 aa24.31■■□□□ 1.48
PCDH8-203ENST00000613548 SAMD9LQ8IVG5 1584 aa24.3■■□□□ 1.48
PCDH8-203ENST00000613548 NCOA2Q15596 1464 aa24.3■■□□□ 1.48
PCDH8-203ENST00000613548 PHLDB1Q86UU1 1377 aa24.29■■□□□ 1.48
PCDH8-203ENST00000613548 GPATCH8Q9UKJ3 1502 aaKnown RBP24.28■■□□□ 1.48
PCDH8-203ENST00000613548 ZMYM4Q5VZL5 1548 aa24.26■■□□□ 1.47
PCDH8-203ENST00000613548 AKNAQ7Z591 1439 aa24.25■■□□□ 1.47
PCDH8-203ENST00000613548 ADGRL1O94910 1474 aa24.25■■□□□ 1.47
PCDH8-203ENST00000613548 KDM5CP41229 1560 aa24.22■■□□□ 1.47
PCDH8-203ENST00000613548 ARHGEF40Q8TER5 1519 aa24.21■■□□□ 1.47
PCDH8-203ENST00000613548 POGZQ7Z3K3 1410 aa24.19■■□□□ 1.46
PCDH8-203ENST00000613548 SYCP2Q9BX26 1530 aa24.19■■□□□ 1.46
PCDH8-203ENST00000613548 DENND4BO75064 1496 aaPredicted RBP24.19■■□□□ 1.46
PCDH8-203ENST00000613548 CCNB3Q8WWL7 1395 aa24.18■■□□□ 1.46
PCDH8-203ENST00000613548 HECW2Q9P2P5 1572 aa24.16■■□□□ 1.46
PCDH8-203ENST00000613548 KANK4Q5T7N3 995 aaPredicted RBP24.15■■□□□ 1.46
PCDH8-203ENST00000613548 ARHGEF12Q9NZN5 1544 aa24.14■■□□□ 1.45
PCDH8-203ENST00000613548 ZNF518AQ6AHZ1 1483 aa24.13■■□□□ 1.45
PCDH8-203ENST00000613548 SCAPERQ9BY12 1400 aa24.12■■□□□ 1.45
PCDH8-203ENST00000613548 EFCAB2Q5VUJ9 269 aa24.12■■□□□ 1.45
PCDH8-203ENST00000613548 CAMSAP2Q08AD1 1489 aa24.12■■□□□ 1.45
PCDH8-203ENST00000613548 PLEKHH2Q8IVE3 1493 aa24.12■■□□□ 1.45
PCDH8-203ENST00000613548 INO80Q9ULG1 1556 aaPredicted RBP24.11■■□□□ 1.45
PCDH8-203ENST00000613548 MYOM3Q5VTT5 1437 aa24.1■■□□□ 1.45
PCDH8-203ENST00000613548 CROCC2H7BZ55 1655 aa24.1■■□□□ 1.45
PCDH8-203ENST00000613548 APLP2Q06481 763 aa24.09■■□□□ 1.45
PCDH8-203ENST00000613548 ABCA6Q8N139 1617 aa24.09■■□□□ 1.45
PCDH8-203ENST00000613548 ZFYVE16Q7Z3T8 1539 aa24.09■■□□□ 1.45
PCDH8-203ENST00000613548 KIDINS220Q9ULH0 1771 aa24.08■■□□□ 1.45
PCDH8-203ENST00000613548 ARHGEF5Q12774 1597 aa24.08■■□□□ 1.44
PCDH8-203ENST00000613548 SIGLEC1Q9BZZ2 1709 aa24.07■■□□□ 1.44
PCDH8-203ENST00000613548 PTPN23Q9H3S7 1636 aa24.07■■□□□ 1.44
PCDH8-203ENST00000613548 KIAA1107Q9UPP5 1409 aa24.06■■□□□ 1.44
PCDH8-203ENST00000613548 MAGI2Q86UL8 1455 aa24.05■■□□□ 1.44
PCDH8-203ENST00000613548 DIP2CQ9Y2E4 1556 aa24.04■■□□□ 1.44
PCDH8-203ENST00000613548 MIA2Q96PC5 1412 aa24.04■■□□□ 1.44
PCDH8-203ENST00000613548 TRAPPC8Q9Y2L5 1435 aa24.04■■□□□ 1.44
PCDH8-203ENST00000613548 RAPGEF3O95398 923 aa24.02■■□□□ 1.44
PCDH8-203ENST00000613548 CFDP1Q9UEE9 299 aaPredicted RBP24.02■■□□□ 1.44
PCDH8-203ENST00000613548 ADGBQ8N7X0 1667 aa24.02■■□□□ 1.44
PCDH8-203ENST00000613548 MBD5Q9P267 1494 aa24■■□□□ 1.43
PCDH8-203ENST00000613548 REREQ9P2R6 1566 aa24■■□□□ 1.43
PCDH8-203ENST00000613548 FGD6Q6ZV73 1430 aa24■■□□□ 1.43
PCDH8-203ENST00000613548 ATP7AQ04656 1500 aa24■■□□□ 1.43
PCDH8-203ENST00000613548 TCOF1Q13428 1488 aaKnown RBP23.99■■□□□ 1.43
PCDH8-203ENST00000613548 MLH3Q9UHC1 1453 aa23.99■■□□□ 1.43
PCDH8-203ENST00000613548 YEATS2Q9ULM3 1422 aa23.98■■□□□ 1.43
PCDH8-203ENST00000613548 CCDC141Q6ZP82 1450 aa23.98■■□□□ 1.43
PCDH8-203ENST00000613548 DNMT1P26358 1616 aaKnown RBP23.98■■□□□ 1.43
PCDH8-203ENST00000613548 MAST1Q9Y2H9 1570 aa23.97■■□□□ 1.43
PCDH8-203ENST00000613548 BCORL1Q5H9F3 1711 aa23.94■■□□□ 1.42
PCDH8-203ENST00000613548 ZNF777Q9ULD5 760 aaPredicted RBP23.94■■□□□ 1.42
PCDH8-203ENST00000613548 ZNF644Q9H582 1327 aaPredicted RBP23.93■■□□□ 1.42
PCDH8-203ENST00000613548 PLXNC1O60486 1568 aa23.92■■□□□ 1.42
PCDH8-203ENST00000613548 C9orf84Q5VXU9 1444 aa23.89■■□□□ 1.41
PCDH8-203ENST00000613548 SHANK2Q9UPX8 1470 aa23.88■■□□□ 1.41
PCDH8-203ENST00000613548 ADAMTSL3P82987 1691 aa23.88■■□□□ 1.41
PCDH8-203ENST00000613548 AFAP1Q8N556 730 aa23.87■■□□□ 1.41
PCDH8-203ENST00000613548 ATP10AO60312 1499 aa23.86■■□□□ 1.41
PCDH8-203ENST00000613548 FER1L4A9Z1Z3 1794 aa23.85■■□□□ 1.41
PCDH8-203ENST00000613548 HNRNPMP52272 730 aaKnown RBP eCLIP23.84■■□□□ 1.41
PCDH8-203ENST00000613548 RTEL1-TNFRSF6BF6WH68 1400 aa23.83■■□□□ 1.4
PCDH8-203ENST00000613548 AGLP35573 1532 aa23.82■■□□□ 1.4
PCDH8-203ENST00000613548 MADDQ8WXG6 1647 aa23.81■■□□□ 1.4
PCDH8-203ENST00000613548 DAPK1P53355 1430 aa23.8■■□□□ 1.4
PCDH8-203ENST00000613548 SPAG9O60271 1321 aaKnown RBP23.79■■□□□ 1.4
PCDH8-203ENST00000613548 EIF2AK4Q9P2K8 1649 aaKnown RBP23.77■■□□□ 1.4
PCDH8-203ENST00000613548 ABCC5O15440 1437 aa23.77■■□□□ 1.4
PCDH8-203ENST00000613548 RIMS1Q86UR5 1692 aaKnown RBP23.76■■□□□ 1.39
PCDH8-203ENST00000613548 RRBP1Q9P2E9 1410 aaKnown RBP23.76■■□□□ 1.39
PCDH8-203ENST00000613548 A2MP01023 1474 aa23.75■■□□□ 1.39
PCDH8-203ENST00000613548 PPARGC1BQ86YN6 1023 aaKnown RBP23.73■■□□□ 1.39
PCDH8-203ENST00000613548 RNF17Q9BXT8 1623 aaKnown RBP23.73■■□□□ 1.39
PCDH8-203ENST00000613548 RSPH4AQ5TD94 716 aa23.72■■□□□ 1.39
PCDH8-203ENST00000613548 ADGRL2O95490 1459 aa23.72■■□□□ 1.39
PCDH8-203ENST00000613548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.7■■□□□ 1.38
PCDH8-203ENST00000613548 MROH2AA6NES4 1674 aa23.69■■□□□ 1.38
PCDH8-203ENST00000613548 DUOX2Q9NRD8 1548 aa23.68■■□□□ 1.38
PCDH8-203ENST00000613548 DEPDC5O75140 1603 aa23.66■■□□□ 1.38
PCDH8-203ENST00000613548 MYT1LQ9UL68 1186 aa23.66■■□□□ 1.38
PCDH8-203ENST00000613548 MROH1Q8NDA8 1641 aa23.65■■□□□ 1.38
PCDH8-203ENST00000613548 GCC2Q8IWJ2 1684 aa23.64■■□□□ 1.38
PCDH8-203ENST00000613548 KDM4FA0A1W2PPD8 638 aa23.64■■□□□ 1.37
PCDH8-203ENST00000613548 CLTCQ00610 1675 aaKnown RBP23.64■■□□□ 1.37
PCDH8-203ENST00000613548 ZC3H13Q5T200 1668 aaKnown RBP23.64■■□□□ 1.37
PCDH8-203ENST00000613548 FAM135AQ9P2D6 1515 aa23.63■■□□□ 1.37
PCDH8-203ENST00000613548 C3P01024 1663 aa23.62■■□□□ 1.37
PCDH8-203ENST00000613548 PTPRKQ15262 1439 aa23.61■■□□□ 1.37
PCDH8-203ENST00000613548 FAM50AQ14320 339 aaKnown RBP23.61■■□□□ 1.37
PCDH8-203ENST00000613548 PRDM15P57071 1507 aaPredicted RBP23.6■■□□□ 1.37
PCDH8-203ENST00000613548 ARID4BQ4LE39 1312 aaPredicted RBP23.59■■□□□ 1.37
PCDH8-203ENST00000613548 ERBINQ96RT1 1412 aa23.59■■□□□ 1.37
PCDH8-203ENST00000613548 CEP152O94986 1710 aa23.59■■□□□ 1.37
PCDH8-203ENST00000613548 TSPY4P0CV99 314 aa23.59■■□□□ 1.37
PCDH8-203ENST00000613548 TSPY10P0CW01 314 aa23.59■■□□□ 1.37
PCDH8-203ENST00000613548 DHX29Q7Z478 1369 aaKnown RBP23.59■■□□□ 1.37
PCDH8-203ENST00000613548 KIF15Q9NS87 1388 aa23.59■■□□□ 1.37
PCDH8-203ENST00000613548 NCOA1Q15788 1441 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms