RNA–Protein interactions for RNA: ENST00000613533.4

PER3-208, Transcript of period circadian regulator 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PER3, Length 6,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PER3-208ENST00000613533 VPS53Q5VIR6 699 aa16.74■□□□□ 0.27
PER3-208ENST00000613533 DCAF11Q8TEB1 546 aa16.73■□□□□ 0.27
PER3-208ENST00000613533 KANK1Q14678 1352 aa16.73■□□□□ 0.27
PER3-208ENST00000613533 CHAF1AQ13111 956 aaPredicted RBP16.73■□□□□ 0.27
PER3-208ENST00000613533 RTN4Q9NQC3 1192 aaKnown RBP16.73■□□□□ 0.27
PER3-208ENST00000613533 GTF2E1P29083 439 aaPredicted RBP16.72■□□□□ 0.27
PER3-208ENST00000613533 KIAA1211Q6ZU35 1233 aa16.72■□□□□ 0.27
PER3-208ENST00000613533 CLIP1P30622 1438 aa16.71■□□□□ 0.27
PER3-208ENST00000613533 HSCBQ8IWL3 235 aa16.71■□□□□ 0.27
PER3-208ENST00000613533 FRAT2O75474 233 aaPredicted RBP16.71■□□□□ 0.26
PER3-208ENST00000613533 TMF1P82094 1093 aa16.7■□□□□ 0.26
PER3-208ENST00000613533 L1TD1Q5T7N2 865 aaKnown RBP16.7■□□□□ 0.26
PER3-208ENST00000613533 AEBP2Q6ZN18 517 aaPredicted RBP16.69■□□□□ 0.26
PER3-208ENST00000613533 WWC1Q8IX03 1113 aa16.69■□□□□ 0.26
PER3-208ENST00000613533 HDGFL2Q7Z4V5 671 aaPredicted RBP16.68■□□□□ 0.26
PER3-208ENST00000613533 CREBRFQ8IUR6 639 aa16.68■□□□□ 0.26
PER3-208ENST00000613533 RASSF8Q8NHQ8 419 aa16.68■□□□□ 0.26
PER3-208ENST00000613533 HSP90B1P14625 803 aaKnown RBP16.68■□□□□ 0.26
PER3-208ENST00000613533 TOMM22Q9NS69 142 aa16.65■□□□□ 0.26
PER3-208ENST00000613533 KLHL34Q8N239 644 aa16.65■□□□□ 0.26
PER3-208ENST00000613533 FBXO3Q9UK99 471 aa16.64■□□□□ 0.26
PER3-208ENST00000613533 B4GALNT3Q6L9W6 998 aa16.64■□□□□ 0.25
PER3-208ENST00000613533 LTV1Q96GA3 475 aaPredicted RBP16.63■□□□□ 0.25
PER3-208ENST00000613533 MARCH6O60337 910 aa16.63■□□□□ 0.25
PER3-208ENST00000613533 SIN3AQ96ST3 1273 aa16.62■□□□□ 0.25
PER3-208ENST00000613533 NUTM2FA1L443 756 aa16.62■□□□□ 0.25
PER3-208ENST00000613533 A0A0U1RQG5 324 aaPredicted RBP16.62■□□□□ 0.25
PER3-208ENST00000613533 PHF23Q9BUL5 403 aaPredicted RBP16.61■□□□□ 0.25
PER3-208ENST00000613533 CCNB3Q8WWL7 1395 aa16.59■□□□□ 0.25
PER3-208ENST00000613533 NUTM2DQ5VT03 806 aaPredicted RBP16.59■□□□□ 0.25
PER3-208ENST00000613533 RAD21O60216 631 aa16.59■□□□□ 0.25
PER3-208ENST00000613533 MSNP26038 577 aaKnown RBP16.59■□□□□ 0.25
PER3-208ENST00000613533 U2AF1L5P0DN76 240 aaPredicted RBP16.58■□□□□ 0.25
PER3-208ENST00000613533 U2AF1Q01081 240 aaKnown RBP eCLIP16.58■□□□□ 0.25
PER3-208ENST00000613533 NGDNQ8NEJ9 315 aaKnown RBP16.57■□□□□ 0.24
PER3-208ENST00000613533 CNKSR2Q8WXI2 1034 aa16.57■□□□□ 0.24
PER3-208ENST00000613533 MEX3CQ5U5Q3 659 aaKnown RBP16.57■□□□□ 0.24
PER3-208ENST00000613533 ITPRIPQ8IWB1 547 aa16.57■□□□□ 0.24
PER3-208ENST00000613533 STK31Q9BXU1 1019 aa16.56■□□□□ 0.24
PER3-208ENST00000613533 CEP89Q96ST8 783 aa16.56■□□□□ 0.24
PER3-208ENST00000613533 SLC4A10Q6U841 1118 aa16.56■□□□□ 0.24
PER3-208ENST00000613533 TRIM6-TRIM34B2RNG4 842 aa16.55■□□□□ 0.24
PER3-208ENST00000613533 EID1Q9Y6B2 187 aa16.55■□□□□ 0.24
PER3-208ENST00000613533 EIF4G1Q04637 1599 aaKnown RBP16.54■□□□□ 0.24
PER3-208ENST00000613533 SPAG9O60271 1321 aaKnown RBP16.54■□□□□ 0.24
PER3-208ENST00000613533 IPO8O15397 1037 aaKnown RBP16.54■□□□□ 0.24
PER3-208ENST00000613533 ARID3AQ99856 593 aa16.54■□□□□ 0.24
PER3-208ENST00000613533 EVA1CP58658 441 aa16.53■□□□□ 0.24
PER3-208ENST00000613533 NOL8Q76FK4 1167 aaKnown RBP16.53■□□□□ 0.24
PER3-208ENST00000613533 GPATCH3Q96I76 525 aa16.52■□□□□ 0.24
PER3-208ENST00000613533 PPP4R2Q9NY27 417 aa16.52■□□□□ 0.23
PER3-208ENST00000613533 AMPHP49418 695 aa16.51■□□□□ 0.23
PER3-208ENST00000613533 CTDP1Q9Y5B0 961 aaPredicted RBP16.51■□□□□ 0.23
PER3-208ENST00000613533 FBXW7Q969H0 707 aa16.5■□□□□ 0.23
PER3-208ENST00000613533 CWC22Q9HCG8 908 aaKnown RBP16.5■□□□□ 0.23
PER3-208ENST00000613533 HTATSF1O43719 755 aaKnown RBP16.5■□□□□ 0.23
PER3-208ENST00000613533 TCEAL9Q9UHQ7 104 aa16.49■□□□□ 0.23
PER3-208ENST00000613533 PES1O00541 588 aaKnown RBP16.49■□□□□ 0.23
PER3-208ENST00000613533 TPM4P67936 248 aa16.49■□□□□ 0.23
PER3-208ENST00000613533 TRIM34Q9BYJ4 488 aa16.49■□□□□ 0.23
PER3-208ENST00000613533 CALD1Q05682 793 aaKnown RBP16.48■□□□□ 0.23
PER3-208ENST00000613533 NOP58Q9Y2X3 529 aaKnown RBP16.48■□□□□ 0.23
PER3-208ENST00000613533 CCDC34Q96HJ3 373 aa16.48■□□□□ 0.23
PER3-208ENST00000613533 CFAP44Q96MT7 982 aa16.48■□□□□ 0.23
PER3-208ENST00000613533 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.47■□□□□ 0.23
PER3-208ENST00000613533 GZF1Q9H116 711 aaPredicted RBP16.46■□□□□ 0.23
PER3-208ENST00000613533 SYTL4Q96C24 671 aaPredicted RBP16.46■□□□□ 0.22
PER3-208ENST00000613533 NGEFQ8N5V2 710 aa16.45■□□□□ 0.22
PER3-208ENST00000613533 SAMD1Q6SPF0 538 aaPredicted RBP16.45■□□□□ 0.22
PER3-208ENST00000613533 DCAF8L1A6NGE4 600 aa16.44■□□□□ 0.22
PER3-208ENST00000613533 FOXD1Q16676 465 aa16.44■□□□□ 0.22
PER3-208ENST00000613533 FOXD4L1Q9NU39 408 aa16.42■□□□□ 0.22
PER3-208ENST00000613533 PKD2Q13563 968 aa16.41■□□□□ 0.22
PER3-208ENST00000613533 CHMP4AQ9BY43 222 aa16.41■□□□□ 0.22
PER3-208ENST00000613533 KIF27Q86VH2 1401 aa16.4■□□□□ 0.22
PER3-208ENST00000613533 SMC4Q9NTJ3 1288 aa16.4■□□□□ 0.22
PER3-208ENST00000613533 GOLGA3Q08378 1498 aa16.4■□□□□ 0.22
PER3-208ENST00000613533 MFAP1P55081 439 aaKnown RBP16.4■□□□□ 0.22
PER3-208ENST00000613533 SLKQ9H2G2 1235 aaPredicted RBP16.4■□□□□ 0.22
PER3-208ENST00000613533 KIF3BO15066 747 aa16.39■□□□□ 0.21
PER3-208ENST00000613533 SF3A1Q15459 793 aaKnown RBP16.39■□□□□ 0.21
PER3-208ENST00000613533 FOXD4L5Q5VV16 416 aaPredicted RBP16.39■□□□□ 0.21
PER3-208ENST00000613533 FOXD4L4Q8WXT5 416 aaPredicted RBP16.39■□□□□ 0.21
PER3-208ENST00000613533 NOL10Q9BSC4 688 aaKnown RBP16.39■□□□□ 0.21
PER3-208ENST00000613533 RWDD1Q9H446 243 aaPredicted RBP16.39■□□□□ 0.21
PER3-208ENST00000613533 HDAC5Q9UQL6 1122 aa16.39■□□□□ 0.21
PER3-208ENST00000613533 TPD52L1Q16890 204 aaPredicted RBP16.38■□□□□ 0.21
PER3-208ENST00000613533 GBP4Q96PP9 640 aa16.38■□□□□ 0.21
PER3-208ENST00000613533 HMMRO75330 724 aa16.37■□□□□ 0.21
PER3-208ENST00000613533 CLUAP1Q96AJ1 413 aa16.37■□□□□ 0.21
PER3-208ENST00000613533 KTN1Q86UP2 1357 aaKnown RBP16.37■□□□□ 0.21
PER3-208ENST00000613533 DHX16O60231 1041 aaKnown RBP16.37■□□□□ 0.21
PER3-208ENST00000613533 TPM3P06753 285 aa16.37■□□□□ 0.21
PER3-208ENST00000613533 CEP162Q5TB80 1403 aa16.37■□□□□ 0.21
PER3-208ENST00000613533 GOLGA6L1Q8N7Z2 621 aa16.36■□□□□ 0.21
PER3-208ENST00000613533 TERF2IPQ9NYB0 399 aa16.36■□□□□ 0.21
PER3-208ENST00000613533 AKAP17AQ02040 695 aaKnown RBP16.36■□□□□ 0.21
PER3-208ENST00000613533 CCDC146Q8IYE0 955 aa16.36■□□□□ 0.21
PER3-208ENST00000613533 C1orf141Q5JVX7 400 aa16.35■□□□□ 0.21
PER3-208ENST00000613533 WASHC2CQ9Y4E1 1318 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms