RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 NEO1Q92859 1461 aa20.3■□□□□ 0.84
SRGAP2C-204ENST00000613462 PLCH2O75038 1416 aa20.29■□□□□ 0.84
SRGAP2C-204ENST00000613462 PHLDB1Q86UU1 1377 aa20.28■□□□□ 0.84
SRGAP2C-204ENST00000613462 NCOA2Q15596 1464 aa20.28■□□□□ 0.84
SRGAP2C-204ENST00000613462 ARHGAP5Q13017 1502 aa20.27■□□□□ 0.83
SRGAP2C-204ENST00000613462 FANCAO15360 1455 aa20.26■□□□□ 0.83
SRGAP2C-204ENST00000613462 COL17A1Q9UMD9 1497 aaPredicted RBP20.26■□□□□ 0.83
SRGAP2C-204ENST00000613462 CCNB3Q8WWL7 1395 aa20.24■□□□□ 0.83
SRGAP2C-204ENST00000613462 HECW2Q9P2P5 1572 aa20.24■□□□□ 0.83
SRGAP2C-204ENST00000613462 GPATCH8Q9UKJ3 1502 aaKnown RBP20.23■□□□□ 0.83
SRGAP2C-204ENST00000613462 KANK4Q5T7N3 995 aaPredicted RBP20.23■□□□□ 0.83
SRGAP2C-204ENST00000613462 EFCAB2Q5VUJ9 269 aa20.19■□□□□ 0.82
SRGAP2C-204ENST00000613462 AKNAQ7Z591 1439 aa20.18■□□□□ 0.82
SRGAP2C-204ENST00000613462 ABCC1P33527 1531 aa20.17■□□□□ 0.82
SRGAP2C-204ENST00000613462 SAMD9LQ8IVG5 1584 aa20.17■□□□□ 0.82
SRGAP2C-204ENST00000613462 RICTORQ6R327 1708 aa20.16■□□□□ 0.82
SRGAP2C-204ENST00000613462 MYOM3Q5VTT5 1437 aa20.15■□□□□ 0.82
SRGAP2C-204ENST00000613462 PLEKHH2Q8IVE3 1493 aa20.15■□□□□ 0.82
SRGAP2C-204ENST00000613462 CFDP1Q9UEE9 299 aaPredicted RBP20.14■□□□□ 0.81
SRGAP2C-204ENST00000613462 MIA2Q96PC5 1412 aa20.13■□□□□ 0.81
SRGAP2C-204ENST00000613462 FRMPD1Q5SYB0 1578 aa20.11■□□□□ 0.81
SRGAP2C-204ENST00000613462 DENND4BO75064 1496 aaPredicted RBP20.11■□□□□ 0.81
SRGAP2C-204ENST00000613462 POGZQ7Z3K3 1410 aa20.09■□□□□ 0.81
SRGAP2C-204ENST00000613462 SCAPERQ9BY12 1400 aa20.09■□□□□ 0.81
SRGAP2C-204ENST00000613462 KIAA1107Q9UPP5 1409 aa20.09■□□□□ 0.81
SRGAP2C-204ENST00000613462 SYCP2Q9BX26 1530 aa20.08■□□□□ 0.81
SRGAP2C-204ENST00000613462 CAMSAP2Q08AD1 1489 aa20.08■□□□□ 0.81
SRGAP2C-204ENST00000613462 ZNF518AQ6AHZ1 1483 aa20.08■□□□□ 0.81
SRGAP2C-204ENST00000613462 PTPN23Q9H3S7 1636 aa20.08■□□□□ 0.8
SRGAP2C-204ENST00000613462 ZMYM4Q5VZL5 1548 aa20.07■□□□□ 0.8
SRGAP2C-204ENST00000613462 KDM5CP41229 1560 aa20.06■□□□□ 0.8
SRGAP2C-204ENST00000613462 FGD6Q6ZV73 1430 aa20.06■□□□□ 0.8
SRGAP2C-204ENST00000613462 ZNF777Q9ULD5 760 aaPredicted RBP20.05■□□□□ 0.8
SRGAP2C-204ENST00000613462 ARHGEF5Q12774 1597 aa20.04■□□□□ 0.8
SRGAP2C-204ENST00000613462 ARHGEF12Q9NZN5 1544 aa20.02■□□□□ 0.8
SRGAP2C-204ENST00000613462 TCOF1Q13428 1488 aaKnown RBP20.02■□□□□ 0.8
SRGAP2C-204ENST00000613462 MAGI2Q86UL8 1455 aa20.01■□□□□ 0.79
SRGAP2C-204ENST00000613462 CROCC2H7BZ55 1655 aa20■□□□□ 0.79
SRGAP2C-204ENST00000613462 ARHGEF40Q8TER5 1519 aa19.99■□□□□ 0.79
SRGAP2C-204ENST00000613462 RAPGEF3O95398 923 aa19.99■□□□□ 0.79
SRGAP2C-204ENST00000613462 CCDC141Q6ZP82 1450 aa19.99■□□□□ 0.79
SRGAP2C-204ENST00000613462 MBD5Q9P267 1494 aa19.99■□□□□ 0.79
SRGAP2C-204ENST00000613462 TRAPPC8Q9Y2L5 1435 aa19.98■□□□□ 0.79
SRGAP2C-204ENST00000613462 INO80Q9ULG1 1556 aaPredicted RBP19.97■□□□□ 0.79
SRGAP2C-204ENST00000613462 RSPH4AQ5TD94 716 aa19.97■□□□□ 0.79
SRGAP2C-204ENST00000613462 PPARGC1BQ86YN6 1023 aaKnown RBP19.97■□□□□ 0.79
SRGAP2C-204ENST00000613462 DNMT1P26358 1616 aaKnown RBP19.97■□□□□ 0.79
SRGAP2C-204ENST00000613462 ZNF644Q9H582 1327 aaPredicted RBP19.97■□□□□ 0.79
SRGAP2C-204ENST00000613462 ZFYVE16Q7Z3T8 1539 aa19.97■□□□□ 0.79
SRGAP2C-204ENST00000613462 MLH3Q9UHC1 1453 aa19.96■□□□□ 0.79
SRGAP2C-204ENST00000613462 KIDINS220Q9ULH0 1771 aa19.95■□□□□ 0.78
SRGAP2C-204ENST00000613462 HNRNPMP52272 730 aaKnown RBP eCLIP19.94■□□□□ 0.78
SRGAP2C-204ENST00000613462 MAST1Q9Y2H9 1570 aa19.94■□□□□ 0.78
SRGAP2C-204ENST00000613462 ATP7AQ04656 1500 aa19.93■□□□□ 0.78
SRGAP2C-204ENST00000613462 ADGBQ8N7X0 1667 aa19.92■□□□□ 0.78
SRGAP2C-204ENST00000613462 AFAP1Q8N556 730 aa19.92■□□□□ 0.78
SRGAP2C-204ENST00000613462 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.92■□□□□ 0.78
SRGAP2C-204ENST00000613462 RRBP1Q9P2E9 1410 aaKnown RBP19.92■□□□□ 0.78
SRGAP2C-204ENST00000613462 SHANK2Q9UPX8 1470 aa19.92■□□□□ 0.78
SRGAP2C-204ENST00000613462 ABCA6Q8N139 1617 aa19.91■□□□□ 0.78
SRGAP2C-204ENST00000613462 RTEL1-TNFRSF6BF6WH68 1400 aa19.9■□□□□ 0.78
SRGAP2C-204ENST00000613462 DIP2CQ9Y2E4 1556 aa19.9■□□□□ 0.78
SRGAP2C-204ENST00000613462 SPAG9O60271 1321 aaKnown RBP19.89■□□□□ 0.77
SRGAP2C-204ENST00000613462 FBXO41Q8TF61 875 aa19.89■□□□□ 0.77
SRGAP2C-204ENST00000613462 REREQ9P2R6 1566 aa19.89■□□□□ 0.77
SRGAP2C-204ENST00000613462 PLXNC1O60486 1568 aa19.87■□□□□ 0.77
SRGAP2C-204ENST00000613462 DAPK1P53355 1430 aa19.87■□□□□ 0.77
SRGAP2C-204ENST00000613462 FAM50AQ14320 339 aaKnown RBP19.86■□□□□ 0.77
SRGAP2C-204ENST00000613462 ABCC5O15440 1437 aa19.85■□□□□ 0.77
SRGAP2C-204ENST00000613462 YEATS2Q9ULM3 1422 aa19.85■□□□□ 0.77
SRGAP2C-204ENST00000613462 TSPY4P0CV99 314 aa19.85■□□□□ 0.77
SRGAP2C-204ENST00000613462 TSPY10P0CW01 314 aa19.85■□□□□ 0.77
SRGAP2C-204ENST00000613462 ATP10AO60312 1499 aa19.85■□□□□ 0.77
SRGAP2C-204ENST00000613462 C9orf84Q5VXU9 1444 aa19.85■□□□□ 0.77
SRGAP2C-204ENST00000613462 MYT1LQ9UL68 1186 aa19.84■□□□□ 0.77
SRGAP2C-204ENST00000613462 ADAMTSL3P82987 1691 aa19.81■□□□□ 0.76
SRGAP2C-204ENST00000613462 SIGLEC1Q9BZZ2 1709 aa19.79■□□□□ 0.76
SRGAP2C-204ENST00000613462 ADGRL2O95490 1459 aa19.79■□□□□ 0.76
SRGAP2C-204ENST00000613462 AGLP35573 1532 aa19.77■□□□□ 0.76
SRGAP2C-204ENST00000613462 BCORL1Q5H9F3 1711 aa19.77■□□□□ 0.76
SRGAP2C-204ENST00000613462 A2MP01023 1474 aa19.77■□□□□ 0.76
SRGAP2C-204ENST00000613462 EIF2AK4Q9P2K8 1649 aaKnown RBP19.76■□□□□ 0.75
SRGAP2C-204ENST00000613462 DUOX2Q9NRD8 1548 aa19.76■□□□□ 0.75
SRGAP2C-204ENST00000613462 ANKRD30AQ9BXX3 1397 aa19.75■□□□□ 0.75
SRGAP2C-204ENST00000613462 PTPRMP28827 1452 aa19.74■□□□□ 0.75
SRGAP2C-204ENST00000613462 ROCK1Q13464 1354 aa19.73■□□□□ 0.75
SRGAP2C-204ENST00000613462 NCOA1Q15788 1441 aa19.71■□□□□ 0.75
SRGAP2C-204ENST00000613462 DHX29Q7Z478 1369 aaKnown RBP19.7■□□□□ 0.74
SRGAP2C-204ENST00000613462 KIF15Q9NS87 1388 aa19.7■□□□□ 0.74
SRGAP2C-204ENST00000613462 PTPRKQ15262 1439 aa19.69■□□□□ 0.74
SRGAP2C-204ENST00000613462 ERBINQ96RT1 1412 aa19.69■□□□□ 0.74
SRGAP2C-204ENST00000613462 GCC2Q8IWJ2 1684 aa19.69■□□□□ 0.74
SRGAP2C-204ENST00000613462 FER1L4A9Z1Z3 1794 aa19.69■□□□□ 0.74
SRGAP2C-204ENST00000613462 ARID4BQ4LE39 1312 aaPredicted RBP19.68■□□□□ 0.74
SRGAP2C-204ENST00000613462 RNF17Q9BXT8 1623 aaKnown RBP19.68■□□□□ 0.74
SRGAP2C-204ENST00000613462 LMTK3Q96Q04 1460 aa19.67■□□□□ 0.74
SRGAP2C-204ENST00000613462 CHIC2Q9UKJ5 165 aa19.66■□□□□ 0.74
SRGAP2C-204ENST00000613462 MADDQ8WXG6 1647 aa19.65■□□□□ 0.74
SRGAP2C-204ENST00000613462 ITGAEP38570 1179 aa19.65■□□□□ 0.74
SRGAP2C-204ENST00000613462 FAM135AQ9P2D6 1515 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms