RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 CCNB3Q8WWL7 1395 aa26.02■■□□□ 1.76
IRF1-211ENST00000613424 ARHGAP5Q13017 1502 aa26.02■■□□□ 1.76
IRF1-211ENST00000613424 CDC42BPBQ9Y5S2 1711 aa26.02■■□□□ 1.76
IRF1-211ENST00000613424 CDC42BPAQ5VT25 1732 aa26.01■■□□□ 1.75
IRF1-211ENST00000613424 SUPT6HQ7KZ85 1726 aaKnown RBP26■■□□□ 1.75
IRF1-211ENST00000613424 PREX2Q70Z35 1606 aa26■■□□□ 1.75
IRF1-211ENST00000613424 NCOA2Q15596 1464 aa25.99■■□□□ 1.75
IRF1-211ENST00000613424 RAPGEF3O95398 923 aa25.99■■□□□ 1.75
IRF1-211ENST00000613424 CFDP1Q9UEE9 299 aaPredicted RBP25.96■■□□□ 1.75
IRF1-211ENST00000613424 ADGRL1O94910 1474 aa25.95■■□□□ 1.74
IRF1-211ENST00000613424 SCAPERQ9BY12 1400 aa25.95■■□□□ 1.74
IRF1-211ENST00000613424 DENND4BO75064 1496 aaPredicted RBP25.94■■□□□ 1.74
IRF1-211ENST00000613424 ZNF777Q9ULD5 760 aaPredicted RBP25.94■■□□□ 1.74
IRF1-211ENST00000613424 ITSN2Q9NZM3 1697 aa25.87■■□□□ 1.73
IRF1-211ENST00000613424 FRMPD1Q5SYB0 1578 aa25.87■■□□□ 1.73
IRF1-211ENST00000613424 RICTORQ6R327 1708 aa25.86■■□□□ 1.73
IRF1-211ENST00000613424 SAMD9LQ8IVG5 1584 aa25.86■■□□□ 1.73
IRF1-211ENST00000613424 ZNF644Q9H582 1327 aaPredicted RBP25.85■■□□□ 1.73
IRF1-211ENST00000613424 ARHGEF12Q9NZN5 1544 aa25.84■■□□□ 1.73
IRF1-211ENST00000613424 POGZQ7Z3K3 1410 aa25.84■■□□□ 1.73
IRF1-211ENST00000613424 AFAP1Q8N556 730 aa25.84■■□□□ 1.73
IRF1-211ENST00000613424 ABCC1P33527 1531 aa25.83■■□□□ 1.73
IRF1-211ENST00000613424 HNRNPMP52272 730 aaKnown RBP eCLIP25.83■■□□□ 1.73
IRF1-211ENST00000613424 PPARGC1BQ86YN6 1023 aaKnown RBP25.8■■□□□ 1.72
IRF1-211ENST00000613424 MYOM3Q5VTT5 1437 aa25.8■■□□□ 1.72
IRF1-211ENST00000613424 KIAA1107Q9UPP5 1409 aa25.8■■□□□ 1.72
IRF1-211ENST00000613424 TRAPPC8Q9Y2L5 1435 aa25.8■■□□□ 1.72
IRF1-211ENST00000613424 PLEKHH2Q8IVE3 1493 aa25.79■■□□□ 1.72
IRF1-211ENST00000613424 ZNF518AQ6AHZ1 1483 aa25.79■■□□□ 1.72
IRF1-211ENST00000613424 SYCP2Q9BX26 1530 aa25.77■■□□□ 1.72
IRF1-211ENST00000613424 ZMYM4Q5VZL5 1548 aa25.76■■□□□ 1.71
IRF1-211ENST00000613424 MIA2Q96PC5 1412 aa25.75■■□□□ 1.71
IRF1-211ENST00000613424 CAMSAP2Q08AD1 1489 aa25.73■■□□□ 1.71
IRF1-211ENST00000613424 MAGI2Q86UL8 1455 aa25.73■■□□□ 1.71
IRF1-211ENST00000613424 KDM5CP41229 1560 aa25.73■■□□□ 1.71
IRF1-211ENST00000613424 MBD5Q9P267 1494 aa25.72■■□□□ 1.71
IRF1-211ENST00000613424 MYT1LQ9UL68 1186 aa25.71■■□□□ 1.71
IRF1-211ENST00000613424 YEATS2Q9ULM3 1422 aa25.7■■□□□ 1.7
IRF1-211ENST00000613424 ZFYVE16Q7Z3T8 1539 aa25.68■■□□□ 1.7
IRF1-211ENST00000613424 MLH3Q9UHC1 1453 aa25.67■■□□□ 1.7
IRF1-211ENST00000613424 RSPH4AQ5TD94 716 aa25.67■■□□□ 1.7
IRF1-211ENST00000613424 FGD6Q6ZV73 1430 aa25.67■■□□□ 1.7
IRF1-211ENST00000613424 SPAG9O60271 1321 aaKnown RBP25.66■■□□□ 1.7
IRF1-211ENST00000613424 ARHGEF40Q8TER5 1519 aa25.66■■□□□ 1.7
IRF1-211ENST00000613424 HECW2Q9P2P5 1572 aa25.65■■□□□ 1.7
IRF1-211ENST00000613424 PTPN23Q9H3S7 1636 aa25.63■■□□□ 1.69
IRF1-211ENST00000613424 ATP10AO60312 1499 aa25.61■■□□□ 1.69
IRF1-211ENST00000613424 CCDC141Q6ZP82 1450 aa25.61■■□□□ 1.69
IRF1-211ENST00000613424 KIDINS220Q9ULH0 1771 aa25.61■■□□□ 1.69
IRF1-211ENST00000613424 ARHGEF5Q12774 1597 aa25.61■■□□□ 1.69
IRF1-211ENST00000613424 TCOF1Q13428 1488 aaKnown RBP25.6■■□□□ 1.69
IRF1-211ENST00000613424 TSPY4P0CV99 314 aa25.59■■□□□ 1.69
IRF1-211ENST00000613424 TSPY10P0CW01 314 aa25.59■■□□□ 1.69
IRF1-211ENST00000613424 ARID4BQ4LE39 1312 aaPredicted RBP25.58■■□□□ 1.69
IRF1-211ENST00000613424 DIP2CQ9Y2E4 1556 aa25.56■■□□□ 1.68
IRF1-211ENST00000613424 ATP7AQ04656 1500 aa25.56■■□□□ 1.68
IRF1-211ENST00000613424 ABCA6Q8N139 1617 aa25.55■■□□□ 1.68
IRF1-211ENST00000613424 RTEL1-TNFRSF6BF6WH68 1400 aa25.55■■□□□ 1.68
IRF1-211ENST00000613424 C9orf84Q5VXU9 1444 aa25.55■■□□□ 1.68
IRF1-211ENST00000613424 KDM4FA0A1W2PPD8 638 aa25.55■■□□□ 1.68
IRF1-211ENST00000613424 FAM50AQ14320 339 aaKnown RBP25.55■■□□□ 1.68
IRF1-211ENST00000613424 INO80Q9ULG1 1556 aaPredicted RBP25.55■■□□□ 1.68
IRF1-211ENST00000613424 ABCC5O15440 1437 aa25.52■■□□□ 1.68
IRF1-211ENST00000613424 SIGLEC1Q9BZZ2 1709 aa25.51■■□□□ 1.68
IRF1-211ENST00000613424 DAPK1P53355 1430 aa25.48■■□□□ 1.67
IRF1-211ENST00000613424 REREQ9P2R6 1566 aa25.48■■□□□ 1.67
IRF1-211ENST00000613424 DNMT1P26358 1616 aaKnown RBP25.46■■□□□ 1.67
IRF1-211ENST00000613424 MAST1Q9Y2H9 1570 aa25.46■■□□□ 1.67
IRF1-211ENST00000613424 MLECQ14165 292 aa25.45■■□□□ 1.66
IRF1-211ENST00000613424 A2MP01023 1474 aa25.45■■□□□ 1.66
IRF1-211ENST00000613424 BCORL1Q5H9F3 1711 aa25.43■■□□□ 1.66
IRF1-211ENST00000613424 ADGBQ8N7X0 1667 aa25.42■■□□□ 1.66
IRF1-211ENST00000613424 CHIC2Q9UKJ5 165 aa25.42■■□□□ 1.66
IRF1-211ENST00000613424 DHX29Q7Z478 1369 aaKnown RBP25.42■■□□□ 1.66
IRF1-211ENST00000613424 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.42■■□□□ 1.66
IRF1-211ENST00000613424 SHANK2Q9UPX8 1470 aa25.41■■□□□ 1.66
IRF1-211ENST00000613424 RRBP1Q9P2E9 1410 aaKnown RBP25.41■■□□□ 1.66
IRF1-211ENST00000613424 CROCC2H7BZ55 1655 aa25.41■■□□□ 1.66
IRF1-211ENST00000613424 AGLP35573 1532 aa25.41■■□□□ 1.66
IRF1-211ENST00000613424 ADAMTSL3P82987 1691 aa25.39■■□□□ 1.65
IRF1-211ENST00000613424 PLXNC1O60486 1568 aa25.38■■□□□ 1.65
IRF1-211ENST00000613424 RRP7BPQ9NSQ0 103 aa25.37■■□□□ 1.65
IRF1-211ENST00000613424 ITGAEP38570 1179 aa25.35■■□□□ 1.65
IRF1-211ENST00000613424 AEBP2Q6ZN18 517 aaPredicted RBP25.35■■□□□ 1.65
IRF1-211ENST00000613424 PTPRKQ15262 1439 aa25.35■■□□□ 1.65
IRF1-211ENST00000613424 ANKRD30AQ9BXX3 1397 aa25.33■■□□□ 1.65
IRF1-211ENST00000613424 NCOA1Q15788 1441 aa25.32■■□□□ 1.64
IRF1-211ENST00000613424 KIF15Q9NS87 1388 aa25.31■■□□□ 1.64
IRF1-211ENST00000613424 MADDQ8WXG6 1647 aa25.31■■□□□ 1.64
IRF1-211ENST00000613424 KIF3BO15066 747 aa25.31■■□□□ 1.64
IRF1-211ENST00000613424 GGT6Q6P531 493 aa25.31■■□□□ 1.64
IRF1-211ENST00000613424 ADGRL2O95490 1459 aa25.29■■□□□ 1.64
IRF1-211ENST00000613424 DUOX2Q9NRD8 1548 aa25.29■■□□□ 1.64
IRF1-211ENST00000613424 RIMS1Q86UR5 1692 aaKnown RBP25.25■■□□□ 1.63
IRF1-211ENST00000613424 FER1L4A9Z1Z3 1794 aa25.25■■□□□ 1.63
IRF1-211ENST00000613424 PTPRMP28827 1452 aa25.24■■□□□ 1.63
IRF1-211ENST00000613424 ESF1Q9H501 851 aaKnown RBP25.24■■□□□ 1.63
IRF1-211ENST00000613424 ROCK1Q13464 1354 aa25.23■■□□□ 1.63
IRF1-211ENST00000613424 PPP6R1Q9UPN7 881 aa25.22■■□□□ 1.63
IRF1-211ENST00000613424 ERBINQ96RT1 1412 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms