RNA–Protein interactions for RNA: ENST00000613060.4

SLC6A6-204, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC6A6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-204ENST00000613060 CHAF1AQ13111 956 aaPredicted RBP15.42■□□□□ 0.06
SLC6A6-204ENST00000613060 RASSF8Q8NHQ8 419 aa15.42■□□□□ 0.06
SLC6A6-204ENST00000613060 PLEKHD1A6NEE1 506 aa15.42■□□□□ 0.06
SLC6A6-204ENST00000613060 SF3B2Q13435 895 aaKnown RBP15.42■□□□□ 0.06
SLC6A6-204ENST00000613060 SRPK2P78362 688 aaKnown RBP15.39■□□□□ 0.05
SLC6A6-204ENST00000613060 STK26Q9P289 416 aa15.39■□□□□ 0.05
SLC6A6-204ENST00000613060 MS4A1P11836 297 aa15.39■□□□□ 0.05
SLC6A6-204ENST00000613060 CEP89Q96ST8 783 aa15.39■□□□□ 0.05
SLC6A6-204ENST00000613060 HDGFP51858 240 aaKnown RBP15.39■□□□□ 0.05
SLC6A6-204ENST00000613060 APBB1O00213 710 aa15.38■□□□□ 0.05
SLC6A6-204ENST00000613060 IRX6P78412 446 aaPredicted RBP15.38■□□□□ 0.05
SLC6A6-204ENST00000613060 RTF1Q92541 710 aaKnown RBP15.38■□□□□ 0.05
SLC6A6-204ENST00000613060 TOMM22Q9NS69 142 aa15.38■□□□□ 0.05
SLC6A6-204ENST00000613060 CCAR1Q8IX12 1150 aaKnown RBP15.37■□□□□ 0.05
SLC6A6-204ENST00000613060 PAXIP1Q6ZW49 1069 aaPredicted RBP15.37■□□□□ 0.05
SLC6A6-204ENST00000613060 SYTL4Q96C24 671 aaPredicted RBP15.37■□□□□ 0.05
SLC6A6-204ENST00000613060 DRC7Q8IY82 874 aa15.36■□□□□ 0.05
SLC6A6-204ENST00000613060 PAF1Q8N7H5 531 aa15.36■□□□□ 0.05
SLC6A6-204ENST00000613060 HSP90B1P14625 803 aaKnown RBP15.35■□□□□ 0.05
SLC6A6-204ENST00000613060 ERCC6Q03468 1493 aa15.35■□□□□ 0.05
SLC6A6-204ENST00000613060 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.35■□□□□ 0.058e-7■■■■■ 68.8
SLC6A6-204ENST00000613060 FOXD1Q16676 465 aa15.34■□□□□ 0.05
SLC6A6-204ENST00000613060 FRAT1Q92837 279 aaPredicted RBP15.34■□□□□ 0.05
SLC6A6-204ENST00000613060 HSP90AB1P08238 724 aaKnown RBP15.34■□□□□ 0.05
SLC6A6-204ENST00000613060 IBSPP21815 317 aaPredicted RBP15.33■□□□□ 0.05
SLC6A6-204ENST00000613060 MCCP23508 829 aa15.33■□□□□ 0.04
SLC6A6-204ENST00000613060 HIRIP3Q9BW71 556 aaPredicted RBP15.32■□□□□ 0.04
SLC6A6-204ENST00000613060 RRP7BPQ9NSQ0 103 aa15.31■□□□□ 0.04
SLC6A6-204ENST00000613060 LTV1Q96GA3 475 aaPredicted RBP15.29■□□□□ 0.04
SLC6A6-204ENST00000613060 NUTM2FA1L443 756 aa15.27■□□□□ 0.04
SLC6A6-204ENST00000613060 NAP1L5Q96NT1 182 aaPredicted RBP15.27■□□□□ 0.04
SLC6A6-204ENST00000613060 GGT6Q6P531 493 aa15.25■□□□□ 0.03
SLC6A6-204ENST00000613060 SLC4A3P48751 1232 aa15.24■□□□□ 0.03
SLC6A6-204ENST00000613060 PPP4R2Q9NY27 417 aa15.24■□□□□ 0.03
SLC6A6-204ENST00000613060 CARD11Q9BXL7 1154 aa15.23■□□□□ 0.03
SLC6A6-204ENST00000613060 SPDYE4A6NLX3 237 aa15.23■□□□□ 0.03
SLC6A6-204ENST00000613060 RSF1Q96T23 1441 aaPredicted RBP15.22■□□□□ 0.03
SLC6A6-204ENST00000613060 PES1O00541 588 aaKnown RBP15.22■□□□□ 0.03
SLC6A6-204ENST00000613060 PLCD3Q8N3E9 789 aa15.21■□□□□ 0.03
SLC6A6-204ENST00000613060 CCDC34Q96HJ3 373 aa15.21■□□□□ 0.03
SLC6A6-204ENST00000613060 CFDP1Q9UEE9 299 aaPredicted RBP15.21■□□□□ 0.02
SLC6A6-204ENST00000613060 RGS3P49796 1198 aa15.2■□□□□ 0.02
SLC6A6-204ENST00000613060 HSCBQ8IWL3 235 aa15.2■□□□□ 0.02
SLC6A6-204ENST00000613060 NOL10Q9BSC4 688 aaKnown RBP15.2■□□□□ 0.02
SLC6A6-204ENST00000613060 TMEM132AQ24JP5 1023 aa15.2■□□□□ 0.02
SLC6A6-204ENST00000613060 PATL2C9JE40 543 aaKnown RBP15.2■□□□□ 0.02
SLC6A6-204ENST00000613060 HTATSF1O43719 755 aaKnown RBP15.2■□□□□ 0.02
SLC6A6-204ENST00000613060 AK7Q96M32 723 aa15.2■□□□□ 0.02
SLC6A6-204ENST00000613060 DHX16O60231 1041 aaKnown RBP15.19■□□□□ 0.02
SLC6A6-204ENST00000613060 CC2D1BQ5T0F9 858 aaKnown RBP15.19■□□□□ 0.02
SLC6A6-204ENST00000613060 KIAA1211Q6ZU35 1233 aa15.19■□□□□ 0.02
SLC6A6-204ENST00000613060 NGEFQ8N5V2 710 aa15.18■□□□□ 0.02
SLC6A6-204ENST00000613060 SPRYD3Q8NCJ5 442 aa15.17■□□□□ 0.02
SLC6A6-204ENST00000613060 CHMP4AQ9BY43 222 aa15.17■□□□□ 0.02
SLC6A6-204ENST00000613060 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
SLC6A6-204ENST00000613060 CCDC43Q96MW1 224 aaKnown RBP15.17■□□□□ 0.02
SLC6A6-204ENST00000613060 MSNP26038 577 aaKnown RBP15.15■□□□□ 0.02
SLC6A6-204ENST00000613060 TPM4P67936 248 aa15.15■□□□□ 0.02
SLC6A6-204ENST00000613060 KANK1Q14678 1352 aa15.15■□□□□ 0.02
SLC6A6-204ENST00000613060 PIP4K2BP78356 416 aa15.15■□□□□ 0.02
SLC6A6-204ENST00000613060 EID1Q9Y6B2 187 aa15.15■□□□□ 0.02
SLC6A6-204ENST00000613060 NUTM2DQ5VT03 806 aaPredicted RBP15.14■□□□□ 0.01
SLC6A6-204ENST00000613060 NGDNQ8NEJ9 315 aaKnown RBP15.14■□□□□ 0.01
SLC6A6-204ENST00000613060 CCDC97Q96F63 343 aaPredicted RBP15.13■□□□□ 0.01
SLC6A6-204ENST00000613060 VPS37DQ86XT2 251 aa15.12■□□□□ 0.01
SLC6A6-204ENST00000613060 AMOTL1Q8IY63 956 aa15.11■□□□□ 0.01
SLC6A6-204ENST00000613060 R3HCC1Q9Y3T6 440 aaKnown RBP15.11■□□□□ 0.01
SLC6A6-204ENST00000613060 NUTM2BA6NNL0 878 aaPredicted RBP15.11■□□□□ 0.01
SLC6A6-204ENST00000613060 NUTM2EB1AL46 878 aaPredicted RBP15.11■□□□□ 0.01
SLC6A6-204ENST00000613060 NUTM2AQ8IVF1 878 aaPredicted RBP15.11■□□□□ 0.01
SLC6A6-204ENST00000613060 WWC2Q6AWC2 1192 aa15.11■□□□□ 0.01
SLC6A6-204ENST00000613060 USP35Q9P2H5 1018 aa15.1■□□□□ 0.01
SLC6A6-204ENST00000613060 HDAC5Q9UQL6 1122 aa15.1■□□□□ 0.01
SLC6A6-204ENST00000613060 GRM1Q13255 1194 aa15.1■□□□□ 0.01
SLC6A6-204ENST00000613060 RBM33Q96EV2 1170 aaKnown RBP15.09■□□□□ 0.01
SLC6A6-204ENST00000613060 HDGFL2Q7Z4V5 671 aaPredicted RBP15.08■□□□□ 0.01
SLC6A6-204ENST00000613060 TMF1P82094 1093 aa15.08■□□□□ 0
SLC6A6-204ENST00000613060 GOLGA6L1Q8N7Z2 621 aa15.07■□□□□ 0
SLC6A6-204ENST00000613060 CALD1Q05682 793 aaKnown RBP15.07■□□□□ 0
SLC6A6-204ENST00000613060 MORC1Q86VD1 984 aa15.07■□□□□ 0
SLC6A6-204ENST00000613060 IPO8O15397 1037 aaKnown RBP15.07■□□□□ 0
SLC6A6-204ENST00000613060 MAP3K9P80192 1104 aa15.07■□□□□ 0
SLC6A6-204ENST00000613060 TMEM87AQ8NBN3 555 aa15.06■□□□□ 0
SLC6A6-204ENST00000613060 MTMR7Q9Y216 660 aa15.06■□□□□ 0
SLC6A6-204ENST00000613060 GPATCH3Q96I76 525 aa15.06■□□□□ 0
SLC6A6-204ENST00000613060 CHMP4BP1P59074 171 aa15.05■□□□□ 0
SLC6A6-204ENST00000613060 IKQ13123 557 aaPredicted RBP15.05■□□□□ 0
SLC6A6-204ENST00000613060 FYB1O15117 783 aa15.05■□□□□ -0
SLC6A6-204ENST00000613060 PTMSP20962 102 aa15.04■□□□□ -0
SLC6A6-204ENST00000613060 ARID3AQ99856 593 aa15.04■□□□□ -0
SLC6A6-204ENST00000613060 AMPHP49418 695 aa15.03■□□□□ -0
SLC6A6-204ENST00000613060 TPD52L1Q16890 204 aaPredicted RBP15.03■□□□□ -0
SLC6A6-204ENST00000613060 SLC4A10Q6U841 1118 aa15.02■□□□□ -0
SLC6A6-204ENST00000613060 NOL8Q76FK4 1167 aaKnown RBP15.02■□□□□ -0
SLC6A6-204ENST00000613060 TPM3P06753 285 aa15.02□□□□□ -0.01
SLC6A6-204ENST00000613060 SYAP1Q96A49 352 aaPredicted RBP15.01□□□□□ -0.01
SLC6A6-204ENST00000613060 TRIM6-TRIM34B2RNG4 842 aa15.01□□□□□ -0.01
SLC6A6-204ENST00000613060 STK31Q9BXU1 1019 aa15.01□□□□□ -0.01
SLC6A6-204ENST00000613060 ZFYVE27Q5T4F4 411 aa15□□□□□ -0.01
SLC6A6-204ENST00000613060 AKAP17AQ02040 695 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms