RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 ZNF777Q9ULD5 760 aaPredicted RBP22.2■■□□□ 1.14
CIT-219ENST00000612548 PTPRKQ15262 1439 aa22.19■■□□□ 1.14
CIT-219ENST00000612548 ARHGAP5Q13017 1502 aa22.17■■□□□ 1.14
CIT-219ENST00000612548 DNMT1P26358 1616 aaKnown RBP22.16■■□□□ 1.14
CIT-219ENST00000612548 ABCA9Q8IUA7 1624 aa22.16■■□□□ 1.14
CIT-219ENST00000612548 SAMD9LQ8IVG5 1584 aa22.14■■□□□ 1.14
CIT-219ENST00000612548 MAPKBP1O60336 1514 aa22.14■■□□□ 1.14
CIT-219ENST00000612548 DAPK1P53355 1430 aa22.14■■□□□ 1.13
CIT-219ENST00000612548 PLCH2O75038 1416 aa22.13■■□□□ 1.13
CIT-219ENST00000612548 ABCC5O15440 1437 aa22.12■■□□□ 1.13
CIT-219ENST00000612548 CROCC2H7BZ55 1655 aa22.09■■□□□ 1.13
CIT-219ENST00000612548 CHIC2Q9UKJ5 165 aa22.09■■□□□ 1.13
CIT-219ENST00000612548 SETD5Q9C0A6 1442 aa22.08■■□□□ 1.13
CIT-219ENST00000612548 ARAP3Q8WWN8 1544 aa22.08■■□□□ 1.12
CIT-219ENST00000612548 RAB3GAP2Q9H2M9 1393 aa22.07■■□□□ 1.12
CIT-219ENST00000612548 SYCP2Q9BX26 1530 aa22.06■■□□□ 1.12
CIT-219ENST00000612548 EFCAB2Q5VUJ9 269 aa22.04■■□□□ 1.12
CIT-219ENST00000612548 HFM1A2PYH4 1435 aa22.04■■□□□ 1.12
CIT-219ENST00000612548 ARHGEF5Q12774 1597 aa22.04■■□□□ 1.12
CIT-219ENST00000612548 CCER1Q8TC90 406 aaPredicted RBP22.04■■□□□ 1.12
CIT-219ENST00000612548 HNRNPMP52272 730 aaKnown RBP eCLIP22.03■■□□□ 1.125e-6■■■■□ 21.1
CIT-219ENST00000612548 MBD5Q9P267 1494 aa22.03■■□□□ 1.12
CIT-219ENST00000612548 ADGBQ8N7X0 1667 aa22.02■■□□□ 1.12
CIT-219ENST00000612548 PLEKHH2Q8IVE3 1493 aa22.02■■□□□ 1.12
CIT-219ENST00000612548 NAIPQ13075 1403 aa22.02■■□□□ 1.12
CIT-219ENST00000612548 AKNAQ7Z591 1439 aa22.02■■□□□ 1.12
CIT-219ENST00000612548 GCC2Q8IWJ2 1684 aa22.02■■□□□ 1.12
CIT-219ENST00000612548 ABCC1P33527 1531 aa22.01■■□□□ 1.11
CIT-219ENST00000612548 RRP7BPQ9NSQ0 103 aa22.01■■□□□ 1.11
CIT-219ENST00000612548 FANCAO15360 1455 aa22.01■■□□□ 1.11
CIT-219ENST00000612548 CCDC141Q6ZP82 1450 aa22.01■■□□□ 1.11
CIT-219ENST00000612548 CD109Q6YHK3 1445 aa22■■□□□ 1.11
CIT-219ENST00000612548 KIAA1107Q9UPP5 1409 aa22■■□□□ 1.11
CIT-219ENST00000612548 HRCP23327 699 aa21.99■■□□□ 1.11
CIT-219ENST00000612548 ROCK1Q13464 1354 aa21.99■■□□□ 1.11
CIT-219ENST00000612548 SHANK2Q9UPX8 1470 aa21.99■■□□□ 1.11
CIT-219ENST00000612548 ARHGEF12Q9NZN5 1544 aa21.98■■□□□ 1.11
CIT-219ENST00000612548 C9orf84Q5VXU9 1444 aa21.97■■□□□ 1.11
CIT-219ENST00000612548 DIP2BQ9P265 1576 aa21.97■■□□□ 1.11
CIT-219ENST00000612548 ADGRL2O95490 1459 aa21.96■■□□□ 1.11
CIT-219ENST00000612548 GLI2P10070 1586 aa21.96■■□□□ 1.11
CIT-219ENST00000612548 MAP3K4Q9Y6R4 1608 aa21.95■■□□□ 1.1
CIT-219ENST00000612548 TSPY4P0CV99 314 aa21.94■■□□□ 1.1
CIT-219ENST00000612548 TSPY10P0CW01 314 aa21.94■■□□□ 1.1
CIT-219ENST00000612548 RSPH4AQ5TD94 716 aa21.94■■□□□ 1.1
CIT-219ENST00000612548 CFAP74Q9C0B2 1584 aa21.93■■□□□ 1.1
CIT-219ENST00000612548 NCOA1Q15788 1441 aa21.93■■□□□ 1.1
CIT-219ENST00000612548 DHX57Q6P158 1386 aaKnown RBP21.92■■□□□ 1.1
CIT-219ENST00000612548 ANKRD30AQ9BXX3 1397 aa21.92■■□□□ 1.1
CIT-219ENST00000612548 KDM6BO15054 1643 aa21.92■■□□□ 1.1
CIT-219ENST00000612548 ADGRL1O94910 1474 aa21.91■■□□□ 1.1
CIT-219ENST00000612548 MAST1Q9Y2H9 1570 aa21.9■■□□□ 1.1
CIT-219ENST00000612548 TRAPPC8Q9Y2L5 1435 aa21.9■■□□□ 1.1
CIT-219ENST00000612548 FAM69CQ0P6D2 419 aa21.9■■□□□ 1.1
CIT-219ENST00000612548 SCAPERQ9BY12 1400 aa21.87■■□□□ 1.09
CIT-219ENST00000612548 KIF13AQ9H1H9 1805 aa21.84■■□□□ 1.09
CIT-219ENST00000612548 DNAJC5Q9H3Z4 198 aa21.84■■□□□ 1.09
CIT-219ENST00000612548 KIF15Q9NS87 1388 aa21.84■■□□□ 1.09
CIT-219ENST00000612548 NEO1Q92859 1461 aa21.84■■□□□ 1.09
CIT-219ENST00000612548 TSPOAP1O95153 1857 aa21.83■■□□□ 1.09
CIT-219ENST00000612548 ZEB1P37275 1124 aaPredicted RBP21.83■■□□□ 1.09
CIT-219ENST00000612548 PLXNC1O60486 1568 aa21.82■■□□□ 1.08
CIT-219ENST00000612548 AFAP1Q8N556 730 aa21.82■■□□□ 1.08
CIT-219ENST00000612548 ANKRD50Q9ULJ7 1429 aa21.8■■□□□ 1.08
CIT-219ENST00000612548 ZFYVE16Q7Z3T8 1539 aa21.8■■□□□ 1.08
CIT-219ENST00000612548 PPRC1Q5VV67 1664 aaKnown RBP21.8■■□□□ 1.08
CIT-219ENST00000612548 SPAG9O60271 1321 aaKnown RBP21.79■■□□□ 1.08
CIT-219ENST00000612548 INO80Q9ULG1 1556 aaPredicted RBP21.78■■□□□ 1.08
CIT-219ENST00000612548 ZNF518AQ6AHZ1 1483 aa21.78■■□□□ 1.08
CIT-219ENST00000612548 TRIM52Q96A61 297 aa21.77■■□□□ 1.08
CIT-219ENST00000612548 POGZQ7Z3K3 1410 aa21.77■■□□□ 1.08
CIT-219ENST00000612548 ATP7AQ04656 1500 aa21.76■■□□□ 1.07
CIT-219ENST00000612548 RTEL1-TNFRSF6BF6WH68 1400 aa21.76■■□□□ 1.07
CIT-219ENST00000612548 CLSPNQ9HAW4 1339 aa21.75■■□□□ 1.07
CIT-219ENST00000612548 TEX14Q8IWB6 1497 aa21.74■■□□□ 1.07
CIT-219ENST00000612548 DENND4BO75064 1496 aaPredicted RBP21.73■■□□□ 1.07
CIT-219ENST00000612548 KDM5CP41229 1560 aa21.73■■□□□ 1.07
CIT-219ENST00000612548 DUOX2Q9NRD8 1548 aa21.73■■□□□ 1.07
CIT-219ENST00000612548 MYT1LQ9UL68 1186 aa21.71■■□□□ 1.07
CIT-219ENST00000612548 KIDINS220Q9ULH0 1771 aa21.71■■□□□ 1.07
CIT-219ENST00000612548 ACIN1Q9UKV3 1341 aaKnown RBP21.7■■□□□ 1.06
CIT-219ENST00000612548 RICTORQ6R327 1708 aa21.7■■□□□ 1.06
CIT-219ENST00000612548 HECW2Q9P2P5 1572 aa21.69■■□□□ 1.06
CIT-219ENST00000612548 RAPGEF3O95398 923 aa21.68■■□□□ 1.06
CIT-219ENST00000612548 ERBINQ96RT1 1412 aa21.68■■□□□ 1.06
CIT-219ENST00000612548 FRMPD1Q5SYB0 1578 aa21.65■■□□□ 1.06
CIT-219ENST00000612548 MLH3Q9UHC1 1453 aa21.65■■□□□ 1.06
CIT-219ENST00000612548 MPHOSPH9Q99550 1183 aa21.65■■□□□ 1.06
CIT-219ENST00000612548 PZPP20742 1482 aa21.65■■□□□ 1.06
CIT-219ENST00000612548 UNC13BO14795 1591 aa21.63■■□□□ 1.05
CIT-219ENST00000612548 KDM5DQ9BY66 1539 aa21.63■■□□□ 1.05
CIT-219ENST00000612548 NUP155O75694 1391 aa21.61■■□□□ 1.05
CIT-219ENST00000612548 SLC4A1APQ9BWU0 796 aaKnown RBP21.61■■□□□ 1.05
CIT-219ENST00000612548 ABCA6Q8N139 1617 aa21.61■■□□□ 1.05
CIT-219ENST00000612548 ZMYM4Q5VZL5 1548 aa21.58■■□□□ 1.04
CIT-219ENST00000612548 DHX29Q7Z478 1369 aaKnown RBP21.57■■□□□ 1.04
CIT-219ENST00000612548 TRHP20396 242 aaPredicted RBP21.57■■□□□ 1.04
CIT-219ENST00000612548 SIN3AQ96ST3 1273 aa21.57■■□□□ 1.04
CIT-219ENST00000612548 A2MP01023 1474 aa21.57■■□□□ 1.04
CIT-219ENST00000612548 EIF2AK4Q9P2K8 1649 aaKnown RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms