RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 HECW2Q9P2P5 1572 aa24.47■■□□□ 1.51
CLTCL1-207ENST00000611723 PLCH2O75038 1416 aa24.46■■□□□ 1.51
CLTCL1-207ENST00000611723 RRBP1Q9P2E9 1410 aaKnown RBP24.46■■□□□ 1.51
CLTCL1-207ENST00000611723 FGD6Q6ZV73 1430 aa24.44■■□□□ 1.5
CLTCL1-207ENST00000611723 CFDP1Q9UEE9 299 aaPredicted RBP24.44■■□□□ 1.5
CLTCL1-207ENST00000611723 CDC42BPAQ5VT25 1732 aa24.43■■□□□ 1.5
CLTCL1-207ENST00000611723 ARAP3Q8WWN8 1544 aa24.42■■□□□ 1.5
CLTCL1-207ENST00000611723 TRIM26Q12899 539 aaPredicted RBP24.42■■□□□ 1.5
CLTCL1-207ENST00000611723 CD109Q6YHK3 1445 aa24.42■■□□□ 1.5
CLTCL1-207ENST00000611723 ITSN2Q9NZM3 1697 aa24.41■■□□□ 1.5
CLTCL1-207ENST00000611723 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.41■■□□□ 1.5
CLTCL1-207ENST00000611723 PREX2Q70Z35 1606 aa24.39■■□□□ 1.5
CLTCL1-207ENST00000611723 MYO5CQ9NQX4 1742 aa24.39■■□□□ 1.5
CLTCL1-207ENST00000611723 TEX14Q8IWB6 1497 aa24.38■■□□□ 1.49
CLTCL1-207ENST00000611723 EFCAB2Q5VUJ9 269 aa24.38■■□□□ 1.49
CLTCL1-207ENST00000611723 CDC42BPBQ9Y5S2 1711 aa24.38■■□□□ 1.49
CLTCL1-207ENST00000611723 TCOF1Q13428 1488 aaKnown RBP24.38■■□□□ 1.49
CLTCL1-207ENST00000611723 PTPN23Q9H3S7 1636 aa24.34■■□□□ 1.49
CLTCL1-207ENST00000611723 ARHGAP5Q13017 1502 aa24.33■■□□□ 1.49
CLTCL1-207ENST00000611723 ZNF644Q9H582 1327 aaPredicted RBP24.32■■□□□ 1.48
CLTCL1-207ENST00000611723 ZNF777Q9ULD5 760 aaPredicted RBP24.31■■□□□ 1.48
CLTCL1-207ENST00000611723 FAM50AQ14320 339 aaKnown RBP24.3■■□□□ 1.48
CLTCL1-207ENST00000611723 FANCAO15360 1455 aa24.29■■□□□ 1.48
CLTCL1-207ENST00000611723 KIAA1107Q9UPP5 1409 aa24.28■■□□□ 1.48
CLTCL1-207ENST00000611723 CAMSAP2Q08AD1 1489 aa24.28■■□□□ 1.48
CLTCL1-207ENST00000611723 PLEKHH2Q8IVE3 1493 aa24.27■■□□□ 1.48
CLTCL1-207ENST00000611723 SAMD9LQ8IVG5 1584 aa24.26■■□□□ 1.47
CLTCL1-207ENST00000611723 RSPH4AQ5TD94 716 aa24.26■■□□□ 1.47
CLTCL1-207ENST00000611723 NEO1Q92859 1461 aa24.26■■□□□ 1.47
CLTCL1-207ENST00000611723 AKNAQ7Z591 1439 aa24.24■■□□□ 1.47
CLTCL1-207ENST00000611723 CFAP74Q9C0B2 1584 aa24.22■■□□□ 1.47
CLTCL1-207ENST00000611723 MBD5Q9P267 1494 aa24.22■■□□□ 1.47
CLTCL1-207ENST00000611723 HNRNPMP52272 730 aaKnown RBP eCLIP24.2■■□□□ 1.46
CLTCL1-207ENST00000611723 ABCC1P33527 1531 aa24.19■■□□□ 1.46
CLTCL1-207ENST00000611723 ARHGEF5Q12774 1597 aa24.18■■□□□ 1.46
CLTCL1-207ENST00000611723 ARHGEF12Q9NZN5 1544 aa24.18■■□□□ 1.46
CLTCL1-207ENST00000611723 ABCC5O15440 1437 aa24.18■■□□□ 1.46
CLTCL1-207ENST00000611723 SCAPERQ9BY12 1400 aa24.17■■□□□ 1.46
CLTCL1-207ENST00000611723 PCGF6Q9BYE7 350 aa24.16■■□□□ 1.46
CLTCL1-207ENST00000611723 DAPK1P53355 1430 aa24.16■■□□□ 1.46
CLTCL1-207ENST00000611723 DNMT1P26358 1616 aaKnown RBP24.15■■□□□ 1.46
CLTCL1-207ENST00000611723 SYCP2Q9BX26 1530 aa24.15■■□□□ 1.46
CLTCL1-207ENST00000611723 PTPRKQ15262 1439 aa24.14■■□□□ 1.45
CLTCL1-207ENST00000611723 TRAPPC8Q9Y2L5 1435 aa24.12■■□□□ 1.45
CLTCL1-207ENST00000611723 ITGAEP38570 1179 aa24.12■■□□□ 1.45
CLTCL1-207ENST00000611723 CCDC141Q6ZP82 1450 aa24.12■■□□□ 1.45
CLTCL1-207ENST00000611723 TSPY4P0CV99 314 aa24.11■■□□□ 1.45
CLTCL1-207ENST00000611723 TSPY10P0CW01 314 aa24.11■■□□□ 1.45
CLTCL1-207ENST00000611723 DENND4BO75064 1496 aaPredicted RBP24.08■■□□□ 1.45
CLTCL1-207ENST00000611723 SHANK2Q9UPX8 1470 aa24.08■■□□□ 1.45
CLTCL1-207ENST00000611723 AFAP1Q8N556 730 aa24.08■■□□□ 1.45
CLTCL1-207ENST00000611723 POGZQ7Z3K3 1410 aa24.06■■□□□ 1.44
CLTCL1-207ENST00000611723 ROCK1Q13464 1354 aa24.05■■□□□ 1.44
CLTCL1-207ENST00000611723 ZNF518AQ6AHZ1 1483 aa24.05■■□□□ 1.44
CLTCL1-207ENST00000611723 C9orf84Q5VXU9 1444 aa24.04■■□□□ 1.44
CLTCL1-207ENST00000611723 CHIC2Q9UKJ5 165 aa24.04■■□□□ 1.44
CLTCL1-207ENST00000611723 CROCC2H7BZ55 1655 aa24.04■■□□□ 1.44
CLTCL1-207ENST00000611723 MAST1Q9Y2H9 1570 aa24.03■■□□□ 1.44
CLTCL1-207ENST00000611723 RTEL1-TNFRSF6BF6WH68 1400 aa24.03■■□□□ 1.44
CLTCL1-207ENST00000611723 ADGRL2O95490 1459 aa24.03■■□□□ 1.44
CLTCL1-207ENST00000611723 SPAG9O60271 1321 aaKnown RBP24.02■■□□□ 1.44
CLTCL1-207ENST00000611723 RAPGEF3O95398 923 aa24.01■■□□□ 1.43
CLTCL1-207ENST00000611723 NCOA1Q15788 1441 aa24.01■■□□□ 1.43
CLTCL1-207ENST00000611723 KDM5CP41229 1560 aa24■■□□□ 1.43
CLTCL1-207ENST00000611723 ADAMTSL3P82987 1691 aa24■■□□□ 1.43
CLTCL1-207ENST00000611723 FBXO41Q8TF61 875 aa24■■□□□ 1.43
CLTCL1-207ENST00000611723 ANKRD30AQ9BXX3 1397 aa24■■□□□ 1.43
CLTCL1-207ENST00000611723 PTPRMP28827 1452 aa24■■□□□ 1.43
CLTCL1-207ENST00000611723 MLH3Q9UHC1 1453 aa23.98■■□□□ 1.43
CLTCL1-207ENST00000611723 RICTORQ6R327 1708 aa23.98■■□□□ 1.43
CLTCL1-207ENST00000611723 HFM1A2PYH4 1435 aa23.97■■□□□ 1.43
CLTCL1-207ENST00000611723 RRP7BPQ9NSQ0 103 aa23.95■■□□□ 1.42
CLTCL1-207ENST00000611723 FRMPD1Q5SYB0 1578 aa23.95■■□□□ 1.42
CLTCL1-207ENST00000611723 ADGBQ8N7X0 1667 aa23.94■■□□□ 1.42
CLTCL1-207ENST00000611723 NAIPQ13075 1403 aa23.93■■□□□ 1.42
CLTCL1-207ENST00000611723 SETD5Q9C0A6 1442 aa23.93■■□□□ 1.42
CLTCL1-207ENST00000611723 INO80Q9ULG1 1556 aaPredicted RBP23.92■■□□□ 1.42
CLTCL1-207ENST00000611723 HRCP23327 699 aa23.92■■□□□ 1.42
CLTCL1-207ENST00000611723 ZMYM4Q5VZL5 1548 aa23.92■■□□□ 1.42
CLTCL1-207ENST00000611723 ZFYVE16Q7Z3T8 1539 aa23.92■■□□□ 1.42
CLTCL1-207ENST00000611723 MAGI2Q86UL8 1455 aa23.92■■□□□ 1.42
CLTCL1-207ENST00000611723 ATP7AQ04656 1500 aa23.91■■□□□ 1.42
CLTCL1-207ENST00000611723 PLXNC1O60486 1568 aa23.91■■□□□ 1.42
CLTCL1-207ENST00000611723 MADDQ8WXG6 1647 aa23.9■■□□□ 1.42
CLTCL1-207ENST00000611723 KIDINS220Q9ULH0 1771 aa23.9■■□□□ 1.42
CLTCL1-207ENST00000611723 KIF15Q9NS87 1388 aa23.9■■□□□ 1.42
CLTCL1-207ENST00000611723 BCORL1Q5H9F3 1711 aa23.89■■□□□ 1.41
CLTCL1-207ENST00000611723 MYT1LQ9UL68 1186 aa23.87■■□□□ 1.41
CLTCL1-207ENST00000611723 GCC2Q8IWJ2 1684 aa23.84■■□□□ 1.41
CLTCL1-207ENST00000611723 LMTK3Q96Q04 1460 aa23.84■■□□□ 1.41
CLTCL1-207ENST00000611723 DUOX2Q9NRD8 1548 aa23.84■■□□□ 1.41
CLTCL1-207ENST00000611723 ANKRD50Q9ULJ7 1429 aa23.84■■□□□ 1.41
CLTCL1-207ENST00000611723 ARID4BQ4LE39 1312 aaPredicted RBP23.84■■□□□ 1.41
CLTCL1-207ENST00000611723 ACIN1Q9UKV3 1341 aaKnown RBP23.84■■□□□ 1.41
CLTCL1-207ENST00000611723 DHX29Q7Z478 1369 aaKnown RBP23.83■■□□□ 1.41
CLTCL1-207ENST00000611723 RAB3GAP2Q9H2M9 1393 aa23.83■■□□□ 1.41
CLTCL1-207ENST00000611723 YEATS2Q9ULM3 1422 aa23.81■■□□□ 1.4
CLTCL1-207ENST00000611723 RIMS1Q86UR5 1692 aaKnown RBP23.8■■□□□ 1.4
CLTCL1-207ENST00000611723 ERBINQ96RT1 1412 aa23.79■■□□□ 1.4
CLTCL1-207ENST00000611723 A2MP01023 1474 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms