RNA–Protein interactions for RNA: ENST00000611640.4

KDM4B-211, Transcript of lysine demethylase 4B, humanhuman

TSL 5 BASIC

Gene KDM4B, Length 5,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-211ENST00000611640 PLCB2Q00722 1185 aa21.16■□□□□ 0.98
KDM4B-211ENST00000611640 FMN1Q68DA7 1419 aa21.16■□□□□ 0.98
KDM4B-211ENST00000611640 OS9Q13438 667 aaPredicted RBP21.16■□□□□ 0.98
KDM4B-211ENST00000611640 TSHZ2Q9NRE2 1034 aa21.15■□□□□ 0.98
KDM4B-211ENST00000611640 ROCK2O75116 1388 aaKnown RBP21.15■□□□□ 0.98
KDM4B-211ENST00000611640 SRPK2P78362 688 aaKnown RBP21.14■□□□□ 0.97
KDM4B-211ENST00000611640 L1TD1Q5T7N2 865 aaKnown RBP21.14■□□□□ 0.97
KDM4B-211ENST00000611640 HAP1P54257 671 aaPredicted RBP21.13■□□□□ 0.97
KDM4B-211ENST00000611640 SPRYD3Q8NCJ5 442 aa21.12■□□□□ 0.97
KDM4B-211ENST00000611640 TCERG1O14776 1098 aaKnown RBP21.11■□□□□ 0.97
KDM4B-211ENST00000611640 SMARCA2P51531 1590 aa21.1■□□□□ 0.97
KDM4B-211ENST00000611640 TOP2AP11388 1531 aaKnown RBP21.09■□□□□ 0.97
KDM4B-211ENST00000611640 KCNJ4P48050 445 aa21.09■□□□□ 0.97
KDM4B-211ENST00000611640 NUP155O75694 1391 aa21.08■□□□□ 0.97
KDM4B-211ENST00000611640 LMOD2Q6P5Q4 547 aa21.08■□□□□ 0.97
KDM4B-211ENST00000611640 SAFB2Q14151 953 aaKnown RBP eCLIP21.08■□□□□ 0.961e-6■■□□□ 11.5
KDM4B-211ENST00000611640 WIZO95785 1651 aa21.08■□□□□ 0.96
KDM4B-211ENST00000611640 FGD1P98174 961 aa21.07■□□□□ 0.96
KDM4B-211ENST00000611640 ANKRD30AQ9BXX3 1397 aa21.06■□□□□ 0.96
KDM4B-211ENST00000611640 CFAP44Q96MT7 982 aa21.05■□□□□ 0.96
KDM4B-211ENST00000611640 L3MBTL2Q969R5 705 aa21.05■□□□□ 0.96
KDM4B-211ENST00000611640 MCCP23508 829 aa21.05■□□□□ 0.96
KDM4B-211ENST00000611640 IPO8O15397 1037 aaKnown RBP21.04■□□□□ 0.96
KDM4B-211ENST00000611640 GOLGA6L6A8MZA4 724 aa21.03■□□□□ 0.96
KDM4B-211ENST00000611640 CARMIL2Q6F5E8 1435 aa21.03■□□□□ 0.96
KDM4B-211ENST00000611640 RWDD1Q9H446 243 aaPredicted RBP21.02■□□□□ 0.96
KDM4B-211ENST00000611640 MSNP26038 577 aaKnown RBP21.01■□□□□ 0.95
KDM4B-211ENST00000611640 TAOK2Q9UL54 1235 aa21■□□□□ 0.95
KDM4B-211ENST00000611640 GOLGA6L4A6NEF3 574 aa21■□□□□ 0.95
KDM4B-211ENST00000611640 SOX12O15370 315 aa21■□□□□ 0.95
KDM4B-211ENST00000611640 U2AF1L5P0DN76 240 aaPredicted RBP21■□□□□ 0.95
KDM4B-211ENST00000611640 U2AF1Q01081 240 aaKnown RBP eCLIP21■□□□□ 0.95
KDM4B-211ENST00000611640 DHX57Q6P158 1386 aaKnown RBP21■□□□□ 0.95
KDM4B-211ENST00000611640 HDGFL2Q7Z4V5 671 aaPredicted RBP20.99■□□□□ 0.95
KDM4B-211ENST00000611640 RAPGEF2Q9Y4G8 1499 aa20.99■□□□□ 0.95
KDM4B-211ENST00000611640 NAP1L2Q9ULW6 460 aaPredicted RBP20.99■□□□□ 0.95
KDM4B-211ENST00000611640 TDRD9Q8NDG6 1382 aaKnown RBP20.99■□□□□ 0.95
KDM4B-211ENST00000611640 IPO9Q96P70 1041 aaKnown RBP20.99■□□□□ 0.95
KDM4B-211ENST00000611640 STK26Q9P289 416 aa20.99■□□□□ 0.95
KDM4B-211ENST00000611640 FHOD3Q2V2M9 1422 aa20.98■□□□□ 0.95
KDM4B-211ENST00000611640 HDGFP51858 240 aaKnown RBP20.98■□□□□ 0.95
KDM4B-211ENST00000611640 ITPRIPQ8IWB1 547 aa20.98■□□□□ 0.95
KDM4B-211ENST00000611640 GGT6Q6P531 493 aa20.98■□□□□ 0.95
KDM4B-211ENST00000611640 RTF1Q92541 710 aaKnown RBP20.96■□□□□ 0.95
KDM4B-211ENST00000611640 SLKQ9H2G2 1235 aaPredicted RBP20.96■□□□□ 0.95
KDM4B-211ENST00000611640 PMFBP1Q8TBY8 1022 aa20.95■□□□□ 0.94
KDM4B-211ENST00000611640 EIF3AQ14152 1382 aaKnown RBP20.95■□□□□ 0.94
KDM4B-211ENST00000611640 GBP4Q96PP9 640 aa20.95■□□□□ 0.94
KDM4B-211ENST00000611640 NLRP13Q86W25 1043 aa20.95■□□□□ 0.94
KDM4B-211ENST00000611640 NRDCO43847 1150 aa20.95■□□□□ 0.94
KDM4B-211ENST00000611640 GOLGA2Q08379 1002 aa20.94■□□□□ 0.94
KDM4B-211ENST00000611640 APBB1O00213 710 aa20.94■□□□□ 0.94
KDM4B-211ENST00000611640 CALD1Q05682 793 aaKnown RBP20.94■□□□□ 0.94
KDM4B-211ENST00000611640 PDE3BQ13370 1112 aa20.94■□□□□ 0.94
KDM4B-211ENST00000611640 CHAF1AQ13111 956 aaPredicted RBP20.93■□□□□ 0.94
KDM4B-211ENST00000611640 PTMSP20962 102 aa20.93■□□□□ 0.94
KDM4B-211ENST00000611640 PDS5BQ9NTI5 1447 aa20.92■□□□□ 0.94
KDM4B-211ENST00000611640 MLECQ14165 292 aa20.91■□□□□ 0.94
KDM4B-211ENST00000611640 EFCAB2Q5VUJ9 269 aa20.9■□□□□ 0.94
KDM4B-211ENST00000611640 GZF1Q9H116 711 aaPredicted RBP20.9■□□□□ 0.94
KDM4B-211ENST00000611640 CCDC146Q8IYE0 955 aa20.88■□□□□ 0.93
KDM4B-211ENST00000611640 KIF15Q9NS87 1388 aa20.88■□□□□ 0.93
KDM4B-211ENST00000611640 CCDC18Q5T9S5 1454 aa20.88■□□□□ 0.93
KDM4B-211ENST00000611640 MFAP1P55081 439 aaKnown RBP20.87■□□□□ 0.93
KDM4B-211ENST00000611640 HNRNPMP52272 730 aaKnown RBP eCLIP20.87■□□□□ 0.936e-7■■■■□ 19.6
KDM4B-211ENST00000611640 SMC4Q9NTJ3 1288 aa20.86■□□□□ 0.93
KDM4B-211ENST00000611640 PHLDB1Q86UU1 1377 aa20.86■□□□□ 0.93
KDM4B-211ENST00000611640 KIAA1211Q6ZU35 1233 aa20.86■□□□□ 0.93
KDM4B-211ENST00000611640 DRC7Q8IY82 874 aa20.86■□□□□ 0.93
KDM4B-211ENST00000611640 MYBBP1AQ9BQG0 1328 aaKnown RBP20.85■□□□□ 0.93
KDM4B-211ENST00000611640 CENPJQ9HC77 1338 aaPredicted RBP20.85■□□□□ 0.93
KDM4B-211ENST00000611640 RUSC2Q8N2Y8 1516 aa20.84■□□□□ 0.93
KDM4B-211ENST00000611640 CLUAP1Q96AJ1 413 aa20.81■□□□□ 0.92
KDM4B-211ENST00000611640 TULP1O00294 542 aaPredicted RBP20.81■□□□□ 0.92
KDM4B-211ENST00000611640 NPHP1O15259 732 aa20.81■□□□□ 0.92
KDM4B-211ENST00000611640 GOLGA6L3A6NEY3 463 aa20.8■□□□□ 0.92
KDM4B-211ENST00000611640 KIF3BO15066 747 aa20.79■□□□□ 0.92
KDM4B-211ENST00000611640 RSPH4AQ5TD94 716 aa20.79■□□□□ 0.92
KDM4B-211ENST00000611640 PRKRIP1Q9H875 184 aaPredicted RBP20.79■□□□□ 0.92
KDM4B-211ENST00000611640 ST20-MTHFSA0A0A6YYL1 179 aa20.79■□□□□ 0.92
KDM4B-211ENST00000611640 CADPSQ9ULU8 1353 aa20.78■□□□□ 0.92
KDM4B-211ENST00000611640 TERF2IPQ9NYB0 399 aa20.78■□□□□ 0.92
KDM4B-211ENST00000611640 ZBED9Q6R2W3 1325 aa20.77■□□□□ 0.91
KDM4B-211ENST00000611640 PANK3Q9H999 370 aa20.75■□□□□ 0.91
KDM4B-211ENST00000611640 SYAP1Q96A49 352 aaPredicted RBP20.75■□□□□ 0.91
KDM4B-211ENST00000611640 KIAA2012Q0VF49 1180 aa20.75■□□□□ 0.91
KDM4B-211ENST00000611640 STK31Q9BXU1 1019 aa20.74■□□□□ 0.91
KDM4B-211ENST00000611640 CENPQQ7L2Z9 268 aaPredicted RBP20.73■□□□□ 0.91
KDM4B-211ENST00000611640 SPAG9O60271 1321 aaKnown RBP20.73■□□□□ 0.91
KDM4B-211ENST00000611640 HMMRO75330 724 aa20.72■□□□□ 0.91
KDM4B-211ENST00000611640 PDE4AP27815 886 aa20.72■□□□□ 0.91
KDM4B-211ENST00000611640 RRP1P56182 461 aaKnown RBP20.72■□□□□ 0.91
KDM4B-211ENST00000611640 CCDC144AA2RUR9 1427 aa20.72■□□□□ 0.91
KDM4B-211ENST00000611640 PAK3O75914 559 aaPredicted RBP20.72■□□□□ 0.91
KDM4B-211ENST00000611640 GNL2Q13823 731 aaKnown RBP20.72■□□□□ 0.91
KDM4B-211ENST00000611640 SMARCA4P51532 1647 aa20.72■□□□□ 0.91
KDM4B-211ENST00000611640 EXOC6Q8TAG9 804 aa20.71■□□□□ 0.91
KDM4B-211ENST00000611640 ATAD2BQ9ULI0 1458 aa20.7■□□□□ 0.9
KDM4B-211ENST00000611640 USP47Q96K76 1375 aa20.7■□□□□ 0.9
KDM4B-211ENST00000611640 PLIN1O60240 522 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms