RNA–Protein interactions for RNA: ENST00000610852.1

PDE4DIP-238, Transcript of phosphodiesterase 4D interacting protein, human

TSL 5

Gene PDE4DIP, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-238	ENST00000610852	TRH	P20396	242 aa	Predicted RBP	13.4	□□□□□ -0.26
PDE4DIP-238	ENST00000610852	KIF13A	Q9H1H9	1805 aa		13.39	□□□□□ -0.27
PDE4DIP-238	ENST00000610852	CDC42BPB	Q9Y5S2	1711 aa		13.39	□□□□□ -0.27
PDE4DIP-238	ENST00000610852	ARHGAP5	Q13017	1502 aa		13.39	□□□□□ -0.27
PDE4DIP-238	ENST00000610852	TCOF1	Q13428	1488 aa	Known RBP	13.38	□□□□□ -0.27
PDE4DIP-238	ENST00000610852	EFCAB2	Q5VUJ9	269 aa		13.38	□□□□□ -0.27
PDE4DIP-238	ENST00000610852	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.37	□□□□□ -0.27
PDE4DIP-238	ENST00000610852	TRIM26	Q12899	539 aa	Predicted RBP	13.37	□□□□□ -0.27
PDE4DIP-238	ENST00000610852	PTPN23	Q9H3S7	1636 aa		13.37	□□□□□ -0.27
PDE4DIP-238	ENST00000610852	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.36	□□□□□ -0.27
PDE4DIP-238	ENST00000610852	ZNF644	Q9H582	1327 aa	Predicted RBP	13.36	□□□□□ -0.27
PDE4DIP-238	ENST00000610852	FANCA	O15360	1455 aa		13.36	□□□□□ -0.27
PDE4DIP-238	ENST00000610852	SAMD9L	Q8IVG5	1584 aa		13.35	□□□□□ -0.27
PDE4DIP-238	ENST00000610852	CAMSAP2	Q08AD1	1489 aa		13.35	□□□□□ -0.27
PDE4DIP-238	ENST00000610852	FAM50A	Q14320	339 aa	Known RBP	13.34	□□□□□ -0.27
PDE4DIP-238	ENST00000610852	PLEKHH2	Q8IVE3	1493 aa		13.33	□□□□□ -0.28
PDE4DIP-238	ENST00000610852	NEO1	Q92859	1461 aa		13.33	□□□□□ -0.28
PDE4DIP-238	ENST00000610852	CFAP74	Q9C0B2	1584 aa		13.32	□□□□□ -0.28
PDE4DIP-238	ENST00000610852	KIAA1107	Q9UPP5	1409 aa		13.32	□□□□□ -0.28
PDE4DIP-238	ENST00000610852	PPRC1	Q5VV67	1664 aa	Known RBP	13.32	□□□□□ -0.28
PDE4DIP-238	ENST00000610852	TEX14	Q8IWB6	1497 aa		13.32	□□□□□ -0.28
PDE4DIP-238	ENST00000610852	AKNA	Q7Z591	1439 aa		13.31	□□□□□ -0.28
PDE4DIP-238	ENST00000610852	ABCC1	P33527	1531 aa		13.31	□□□□□ -0.28
PDE4DIP-238	ENST00000610852	ADGRL1	O94910	1474 aa		13.29	□□□□□ -0.28
PDE4DIP-238	ENST00000610852	MBD5	Q9P267	1494 aa		13.29	□□□□□ -0.28
PDE4DIP-238	ENST00000610852	SYCP2	Q9BX26	1530 aa		13.29	□□□□□ -0.28
PDE4DIP-238	ENST00000610852	ARHGEF12	Q9NZN5	1544 aa		13.29	□□□□□ -0.28
PDE4DIP-238	ENST00000610852	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
PDE4DIP-238	ENST00000610852	ARHGEF5	Q12774	1597 aa		13.28	□□□□□ -0.28
PDE4DIP-238	ENST00000610852	RSPH4A	Q5TD94	716 aa		13.28	□□□□□ -0.28
PDE4DIP-238	ENST00000610852	SCAPER	Q9BY12	1400 aa		13.28	□□□□□ -0.28
PDE4DIP-238	ENST00000610852	DNMT1	P26358	1616 aa	Known RBP	13.28	□□□□□ -0.28
PDE4DIP-238	ENST00000610852	TSPOAP1	O95153	1857 aa		13.27	□□□□□ -0.28
PDE4DIP-238	ENST00000610852	ABCC5	O15440	1437 aa		13.27	□□□□□ -0.29
PDE4DIP-238	ENST00000610852	DAPK1	P53355	1430 aa		13.27	□□□□□ -0.29
PDE4DIP-238	ENST00000610852	CCDC141	Q6ZP82	1450 aa		13.26	□□□□□ -0.29
PDE4DIP-238	ENST00000610852	TRAPPC8	Q9Y2L5	1435 aa		13.25	□□□□□ -0.29
PDE4DIP-238	ENST00000610852	ITGAE	P38570	1179 aa		13.25	□□□□□ -0.29
PDE4DIP-238	ENST00000610852	PTPRK	Q15262	1439 aa		13.24	□□□□□ -0.29
PDE4DIP-238	ENST00000610852	PCGF6	Q9BYE7	350 aa		13.24	□□□□□ -0.29
PDE4DIP-238	ENST00000610852	DENND4B	O75064	1496 aa	Predicted RBP	13.23	□□□□□ -0.29
PDE4DIP-238	ENST00000610852	POGZ	Q7Z3K3	1410 aa		13.23	□□□□□ -0.29
PDE4DIP-238	ENST00000610852	AFAP1	Q8N556	730 aa		13.23	□□□□□ -0.29
PDE4DIP-238	ENST00000610852	ZNF518A	Q6AHZ1	1483 aa		13.23	□□□□□ -0.29
PDE4DIP-238	ENST00000610852	SHANK2	Q9UPX8	1470 aa		13.23	□□□□□ -0.29
PDE4DIP-238	ENST00000610852	CROCC2	H7BZ55	1655 aa		13.22	□□□□□ -0.29
PDE4DIP-238	ENST00000610852	TSPY4	P0CV99	314 aa		13.22	□□□□□ -0.29
PDE4DIP-238	ENST00000610852	TSPY10	P0CW01	314 aa		13.22	□□□□□ -0.29
PDE4DIP-238	ENST00000610852	C9orf84	Q5VXU9	1444 aa		13.21	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	MAST1	Q9Y2H9	1570 aa		13.2	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	RAPGEF3	O95398	923 aa		13.2	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	CHIC2	Q9UKJ5	165 aa		13.2	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	KDM5C	P41229	1560 aa		13.2	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	ROCK1	Q13464	1354 aa		13.2	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	ADGRL2	O95490	1459 aa		13.19	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.19	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	FRMPD1	Q5SYB0	1578 aa		13.19	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	SPAG9	O60271	1321 aa	Known RBP	13.18	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.18	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	RICTOR	Q6R327	1708 aa		13.18	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	MLH3	Q9UHC1	1453 aa		13.17	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	NCOA1	Q15788	1441 aa		13.17	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	ZFYVE16	Q7Z3T8	1539 aa		13.17	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	ANKRD30A	Q9BXX3	1397 aa		13.17	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	INO80	Q9ULG1	1556 aa	Predicted RBP	13.16	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	ADGB	Q8N7X0	1667 aa		13.16	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	ATP7A	Q04656	1500 aa		13.16	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	ZMYM4	Q5VZL5	1548 aa		13.16	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	HFM1	A2PYH4	1435 aa		13.15	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	PLXNC1	O60486	1568 aa		13.15	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	HECW2	Q9P2P5	1572 aa		13.15	□□□□□ -0.3
PDE4DIP-238	ENST00000610852	KDM6B	O15054	1643 aa		13.14	□□□□□ -0.31
PDE4DIP-238	ENST00000610852	RRP7BP	Q9NSQ0	103 aa		13.14	□□□□□ -0.31
PDE4DIP-238	ENST00000610852	NAIP	Q13075	1403 aa		13.13	□□□□□ -0.31
PDE4DIP-238	ENST00000610852	KIDINS220	Q9ULH0	1771 aa		13.13	□□□□□ -0.31
PDE4DIP-238	ENST00000610852	MAGI2	Q86UL8	1455 aa		13.13	□□□□□ -0.31
PDE4DIP-238	ENST00000610852	KIF15	Q9NS87	1388 aa		13.12	□□□□□ -0.31
PDE4DIP-238	ENST00000610852	MYT1L	Q9UL68	1186 aa		13.12	□□□□□ -0.31
PDE4DIP-238	ENST00000610852	SETD5	Q9C0A6	1442 aa		13.12	□□□□□ -0.31
PDE4DIP-238	ENST00000610852	GCC2	Q8IWJ2	1684 aa		13.1	□□□□□ -0.31
PDE4DIP-238	ENST00000610852	YEATS2	Q9ULM3	1422 aa		13.1	□□□□□ -0.31
PDE4DIP-238	ENST00000610852	ABCA6	Q8N139	1617 aa		13.1	□□□□□ -0.31
PDE4DIP-238	ENST00000610852	DUOX2	Q9NRD8	1548 aa		13.09	□□□□□ -0.31
PDE4DIP-238	ENST00000610852	DIP2C	Q9Y2E4	1556 aa		13.09	□□□□□ -0.31
PDE4DIP-238	ENST00000610852	ANKRD50	Q9ULJ7	1429 aa		13.08	□□□□□ -0.32
PDE4DIP-238	ENST00000610852	DHX29	Q7Z478	1369 aa	Known RBP	13.07	□□□□□ -0.32
PDE4DIP-238	ENST00000610852	RAB3GAP2	Q9H2M9	1393 aa		13.07	□□□□□ -0.32
PDE4DIP-238	ENST00000610852	ERBIN	Q96RT1	1412 aa		13.07	□□□□□ -0.32
PDE4DIP-238	ENST00000610852	A2M	P01023	1474 aa		13.07	□□□□□ -0.32
PDE4DIP-238	ENST00000610852	ATP10A	O60312	1499 aa		13.06	□□□□□ -0.32
PDE4DIP-238	ENST00000610852	HRC	P23327	699 aa		13.06	□□□□□ -0.32
PDE4DIP-238	ENST00000610852	ARHGEF40	Q8TER5	1519 aa		13.06	□□□□□ -0.32
PDE4DIP-238	ENST00000610852	RERE	Q9P2R6	1566 aa		13.04	□□□□□ -0.32
PDE4DIP-238	ENST00000610852	ACIN1	Q9UKV3	1341 aa	Known RBP	13.03	□□□□□ -0.32
PDE4DIP-238	ENST00000610852	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.02	□□□□□ -0.32
PDE4DIP-238	ENST00000610852	AGL	P35573	1532 aa		13	□□□□□ -0.33
PDE4DIP-238	ENST00000610852	KIF3B	O15066	747 aa		13	□□□□□ -0.33
PDE4DIP-238	ENST00000610852	BCORL1	Q5H9F3	1711 aa		12.99	□□□□□ -0.33
PDE4DIP-238	ENST00000610852	UNC13B	O14795	1591 aa		12.98	□□□□□ -0.33
PDE4DIP-238	ENST00000610852	TRIM52	Q96A61	297 aa		12.97	□□□□□ -0.33

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