RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 MTUS2Q5JR59 1369 aa30.72■■■□□ 2.51
TCF3-219ENST00000610756 POGZQ7Z3K3 1410 aa30.72■■■□□ 2.51
TCF3-219ENST00000610756 MAGI2Q86UL8 1455 aa30.71■■■□□ 2.51
TCF3-219ENST00000610756 ZMYM4Q5VZL5 1548 aa30.69■■■□□ 2.5
TCF3-219ENST00000610756 AFAP1Q8N556 730 aa30.67■■■□□ 2.5
TCF3-219ENST00000610756 CDC42BPBQ9Y5S2 1711 aa30.65■■■□□ 2.5
TCF3-219ENST00000610756 GPATCH8Q9UKJ3 1502 aaKnown RBP30.65■■■□□ 2.5
TCF3-219ENST00000610756 VPS8Q8N3P4 1428 aa30.65■■■□□ 2.5
TCF3-219ENST00000610756 ARID4BQ4LE39 1312 aaPredicted RBP30.64■■■□□ 2.5
TCF3-219ENST00000610756 PREX2Q70Z35 1606 aa30.63■■■□□ 2.49
TCF3-219ENST00000610756 ZNF518AQ6AHZ1 1483 aa30.63■■■□□ 2.49
TCF3-219ENST00000610756 YEATS2Q9ULM3 1422 aa30.62■■■□□ 2.49
TCF3-219ENST00000610756 CCNB3Q8WWL7 1395 aa30.61■■■□□ 2.49
TCF3-219ENST00000610756 ARHGEF40Q8TER5 1519 aa30.61■■■□□ 2.49
TCF3-219ENST00000610756 CFDP1Q9UEE9 299 aaPredicted RBP30.6■■■□□ 2.49
TCF3-219ENST00000610756 ZFYVE16Q7Z3T8 1539 aa30.6■■■□□ 2.49
TCF3-219ENST00000610756 ZNF777Q9ULD5 760 aaPredicted RBP30.59■■■□□ 2.49
TCF3-219ENST00000610756 CDC42BPAQ5VT25 1732 aa30.57■■■□□ 2.48
TCF3-219ENST00000610756 ARHGEF12Q9NZN5 1544 aa30.56■■■□□ 2.48
TCF3-219ENST00000610756 EHBP1L1Q8N3D4 1523 aa30.55■■■□□ 2.48
TCF3-219ENST00000610756 TRAPPC8Q9Y2L5 1435 aa30.54■■■□□ 2.48
TCF3-219ENST00000610756 ATP10AO60312 1499 aa30.53■■■□□ 2.48
TCF3-219ENST00000610756 KDM5CP41229 1560 aa30.53■■■□□ 2.48
TCF3-219ENST00000610756 ABCC1P33527 1531 aa30.52■■■□□ 2.48
TCF3-219ENST00000610756 MYT1LQ9UL68 1186 aa30.51■■■□□ 2.48
TCF3-219ENST00000610756 MLH3Q9UHC1 1453 aa30.5■■■□□ 2.47
TCF3-219ENST00000610756 HNRNPMP52272 730 aaKnown RBP eCLIP30.49■■■□□ 2.47
TCF3-219ENST00000610756 KIAA1107Q9UPP5 1409 aa30.49■■■□□ 2.47
TCF3-219ENST00000610756 TIAM1Q13009 1591 aa30.48■■■□□ 2.47
TCF3-219ENST00000610756 ADAMTSL3P82987 1691 aa30.48■■■□□ 2.47
TCF3-219ENST00000610756 BCORL1Q5H9F3 1711 aa30.46■■■□□ 2.47
TCF3-219ENST00000610756 C9orf84Q5VXU9 1444 aa30.45■■■□□ 2.47
TCF3-219ENST00000610756 PLEKHH2Q8IVE3 1493 aa30.45■■■□□ 2.47
TCF3-219ENST00000610756 MAP3K1Q13233 1512 aa30.45■■■□□ 2.47
TCF3-219ENST00000610756 SAMD9LQ8IVG5 1584 aa30.45■■■□□ 2.47
TCF3-219ENST00000610756 NCOA2Q15596 1464 aa30.43■■■□□ 2.46
TCF3-219ENST00000610756 LRRC9Q6ZRR7 1453 aa30.43■■■□□ 2.46
TCF3-219ENST00000610756 ZNF644Q9H582 1327 aaPredicted RBP30.42■■■□□ 2.46
TCF3-219ENST00000610756 KANK4Q5T7N3 995 aaPredicted RBP30.42■■■□□ 2.46
TCF3-219ENST00000610756 ITSN2Q9NZM3 1697 aa30.41■■■□□ 2.46
TCF3-219ENST00000610756 HECW2Q9P2P5 1572 aa30.41■■■□□ 2.46
TCF3-219ENST00000610756 PTPRMP28827 1452 aa30.41■■■□□ 2.46
TCF3-219ENST00000610756 SPAG9O60271 1321 aaKnown RBP30.39■■■□□ 2.46
TCF3-219ENST00000610756 MLECQ14165 292 aa30.39■■■□□ 2.46
TCF3-219ENST00000610756 SYCP2Q9BX26 1530 aa30.39■■■□□ 2.45
TCF3-219ENST00000610756 SIGLEC1Q9BZZ2 1709 aa30.37■■■□□ 2.45
TCF3-219ENST00000610756 SUPT6HQ7KZ85 1726 aaKnown RBP30.36■■■□□ 2.45
TCF3-219ENST00000610756 APLP2Q06481 763 aa30.36■■■□□ 2.45
TCF3-219ENST00000610756 DIP2CQ9Y2E4 1556 aa30.34■■■□□ 2.45
TCF3-219ENST00000610756 MADDQ8WXG6 1647 aa30.33■■■□□ 2.45
TCF3-219ENST00000610756 MBD5Q9P267 1494 aa30.32■■■□□ 2.44
TCF3-219ENST00000610756 REREQ9P2R6 1566 aa30.32■■■□□ 2.44
TCF3-219ENST00000610756 RSPH4AQ5TD94 716 aa30.31■■■□□ 2.44
TCF3-219ENST00000610756 KIDINS220Q9ULH0 1771 aa30.3■■■□□ 2.44
TCF3-219ENST00000610756 ABCA6Q8N139 1617 aa30.28■■■□□ 2.44
TCF3-219ENST00000610756 AGLP35573 1532 aa30.26■■■□□ 2.43
TCF3-219ENST00000610756 RTEL1-TNFRSF6BF6WH68 1400 aa30.21■■■□□ 2.43
TCF3-219ENST00000610756 ATP7AQ04656 1500 aa30.21■■■□□ 2.43
TCF3-219ENST00000610756 RIMS1Q86UR5 1692 aaKnown RBP30.21■■■□□ 2.43
TCF3-219ENST00000610756 CAMSAP2Q08AD1 1489 aa30.2■■■□□ 2.43
TCF3-219ENST00000610756 MIA2Q96PC5 1412 aa30.18■■■□□ 2.42
TCF3-219ENST00000610756 INO80Q9ULG1 1556 aaPredicted RBP30.17■■■□□ 2.42
TCF3-219ENST00000610756 MYOM3Q5VTT5 1437 aa30.17■■■□□ 2.42
TCF3-219ENST00000610756 CCDC141Q6ZP82 1450 aa30.15■■■□□ 2.42
TCF3-219ENST00000610756 TSPY4P0CV99 314 aa30.15■■■□□ 2.42
TCF3-219ENST00000610756 TSPY10P0CW01 314 aa30.15■■■□□ 2.42
TCF3-219ENST00000610756 PLPPR3Q6T4P5 718 aa30.15■■■□□ 2.42
TCF3-219ENST00000610756 A2MP01023 1474 aa30.14■■■□□ 2.42
TCF3-219ENST00000610756 ESF1Q9H501 851 aaKnown RBP30.14■■■□□ 2.42
TCF3-219ENST00000610756 FER1L4A9Z1Z3 1794 aa30.12■■■□□ 2.41
TCF3-219ENST00000610756 CEBPAP49715 358 aaPredicted RBP30.11■■■□□ 2.41
TCF3-219ENST00000610756 ARHGEF5Q12774 1597 aa30.08■■■□□ 2.41
TCF3-219ENST00000610756 DHX29Q7Z478 1369 aaKnown RBP30.08■■■□□ 2.41
TCF3-219ENST00000610756 PLXNC1O60486 1568 aa30.06■■■□□ 2.4
TCF3-219ENST00000610756 PPP6R1Q9UPN7 881 aa30.05■■■□□ 2.4
TCF3-219ENST00000610756 CNTLNQ9NXG0 1405 aa30.04■■■□□ 2.4
TCF3-219ENST00000610756 GGT6Q6P531 493 aa30.03■■■□□ 2.4
TCF3-219ENST00000610756 LMTK3Q96Q04 1460 aa30.03■■■□□ 2.4
TCF3-219ENST00000610756 ADGBQ8N7X0 1667 aa30.01■■■□□ 2.39
TCF3-219ENST00000610756 ZMYM3Q14202 1370 aa29.96■■■□□ 2.39
TCF3-219ENST00000610756 KIF3BO15066 747 aa29.96■■■□□ 2.39
TCF3-219ENST00000610756 FGD6Q6ZV73 1430 aa29.95■■■□□ 2.39
TCF3-219ENST00000610756 HSPA2P54652 639 aa29.93■■■□□ 2.38
TCF3-219ENST00000610756 MAST1Q9Y2H9 1570 aa29.91■■■□□ 2.38
TCF3-219ENST00000610756 TCOF1Q13428 1488 aaKnown RBP29.9■■■□□ 2.38
TCF3-219ENST00000610756 PTPN23Q9H3S7 1636 aa29.9■■■□□ 2.38
TCF3-219ENST00000610756 ABCC5O15440 1437 aa29.89■■■□□ 2.38
TCF3-219ENST00000610756 SETD1BQ9UPS6 1966 aaKnown RBP29.89■■■□□ 2.37
TCF3-219ENST00000610756 C3P01024 1663 aa29.88■■■□□ 2.37
TCF3-219ENST00000610756 NPATQ14207 1427 aa29.84■■■□□ 2.37
TCF3-219ENST00000610756 UHRF1BP1Q6BDS2 1440 aa29.84■■■□□ 2.37
TCF3-219ENST00000610756 MROH2AA6NES4 1674 aa29.84■■■□□ 2.37
TCF3-219ENST00000610756 DAPK1P53355 1430 aa29.82■■■□□ 2.36
TCF3-219ENST00000610756 SHANK2Q9UPX8 1470 aa29.82■■■□□ 2.36
TCF3-219ENST00000610756 WASHC2CQ9Y4E1 1318 aa29.82■■■□□ 2.36
TCF3-219ENST00000610756 PREX1Q8TCU6 1659 aa29.81■■■□□ 2.36
TCF3-219ENST00000610756 RRP7BPQ9NSQ0 103 aa29.79■■■□□ 2.36
TCF3-219ENST00000610756 CLTCQ00610 1675 aaKnown RBP29.78■■■□□ 2.36
TCF3-219ENST00000610756 FAM50AQ14320 339 aaKnown RBP29.78■■■□□ 2.36
TCF3-219ENST00000610756 PTPRKQ15262 1439 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms