RNA–Protein interactions for RNA: ENST00000610642.4

SLC6A6-203, Transcript of solute carrier family 6 member 6, humanhuman

TSL 2

Gene SLC6A6, Length 1,983 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-203ENST00000610642 ZNF644Q9H582 1327 aaPredicted RBP28.49■■■□□ 2.15
SLC6A6-203ENST00000610642 ABCA9Q8IUA7 1624 aa28.48■■■□□ 2.15
SLC6A6-203ENST00000610642 ZNF777Q9ULD5 760 aaPredicted RBP28.48■■■□□ 2.15
SLC6A6-203ENST00000610642 PLCH2O75038 1416 aa28.47■■■□□ 2.15
SLC6A6-203ENST00000610642 ARHGAP5Q13017 1502 aa28.46■■■□□ 2.15
SLC6A6-203ENST00000610642 ARAP3Q8WWN8 1544 aa28.42■■■□□ 2.14
SLC6A6-203ENST00000610642 PTPRKQ15262 1439 aa28.41■■■□□ 2.14
SLC6A6-203ENST00000610642 DNMT1P26358 1616 aaKnown RBP28.41■■■□□ 2.14
SLC6A6-203ENST00000610642 SAMD9LQ8IVG5 1584 aa28.39■■■□□ 2.14
SLC6A6-203ENST00000610642 DAPK1P53355 1430 aa28.39■■■□□ 2.14
SLC6A6-203ENST00000610642 EFCAB2Q5VUJ9 269 aa28.37■■■□□ 2.13
SLC6A6-203ENST00000610642 ABCC5O15440 1437 aa28.36■■■□□ 2.13
SLC6A6-203ENST00000610642 PLEKHH2Q8IVE3 1493 aa28.33■■■□□ 2.13
SLC6A6-203ENST00000610642 DNAJC5Q9H3Z4 198 aa28.32■■■□□ 2.12
SLC6A6-203ENST00000610642 ARHGEF5Q12774 1597 aa28.31■■■□□ 2.12
SLC6A6-203ENST00000610642 CD109Q6YHK3 1445 aa28.31■■■□□ 2.12
SLC6A6-203ENST00000610642 KIAA1107Q9UPP5 1409 aa28.3■■■□□ 2.12
SLC6A6-203ENST00000610642 GLI2P10070 1586 aa28.3■■■□□ 2.12
SLC6A6-203ENST00000610642 MBD5Q9P267 1494 aa28.3■■■□□ 2.12
SLC6A6-203ENST00000610642 HNRNPMP52272 730 aaKnown RBP eCLIP28.29■■■□□ 2.12
SLC6A6-203ENST00000610642 FANCAO15360 1455 aa28.29■■■□□ 2.12
SLC6A6-203ENST00000610642 SETD5Q9C0A6 1442 aa28.29■■■□□ 2.12
SLC6A6-203ENST00000610642 CHIC2Q9UKJ5 165 aa28.28■■■□□ 2.12
SLC6A6-203ENST00000610642 CROCC2H7BZ55 1655 aa28.28■■■□□ 2.12
SLC6A6-203ENST00000610642 SYCP2Q9BX26 1530 aa28.28■■■□□ 2.12
SLC6A6-203ENST00000610642 RSPH4AQ5TD94 716 aa28.27■■■□□ 2.12
SLC6A6-203ENST00000610642 HFM1A2PYH4 1435 aa28.27■■■□□ 2.12
SLC6A6-203ENST00000610642 DIP2BQ9P265 1576 aa28.26■■■□□ 2.11
SLC6A6-203ENST00000610642 AKNAQ7Z591 1439 aa28.26■■■□□ 2.11
SLC6A6-203ENST00000610642 ABCC1P33527 1531 aa28.25■■■□□ 2.11
SLC6A6-203ENST00000610642 ROCK1Q13464 1354 aa28.24■■■□□ 2.11
SLC6A6-203ENST00000610642 CCDC141Q6ZP82 1450 aa28.24■■■□□ 2.11
SLC6A6-203ENST00000610642 SHANK2Q9UPX8 1470 aa28.24■■■□□ 2.11
SLC6A6-203ENST00000610642 MAP3K4Q9Y6R4 1608 aa28.23■■■□□ 2.11
SLC6A6-203ENST00000610642 RAB3GAP2Q9H2M9 1393 aa28.23■■■□□ 2.11
SLC6A6-203ENST00000610642 NAIPQ13075 1403 aa28.22■■■□□ 2.11
SLC6A6-203ENST00000610642 ARHGEF12Q9NZN5 1544 aa28.21■■■□□ 2.11
SLC6A6-203ENST00000610642 TSPY4P0CV99 314 aa28.2■■■□□ 2.11
SLC6A6-203ENST00000610642 TSPY10P0CW01 314 aa28.2■■■□□ 2.11
SLC6A6-203ENST00000610642 FAM69CQ0P6D2 419 aa28.2■■■□□ 2.11
SLC6A6-203ENST00000610642 CFAP74Q9C0B2 1584 aa28.2■■■□□ 2.11
SLC6A6-203ENST00000610642 ADGBQ8N7X0 1667 aa28.2■■■□□ 2.1
SLC6A6-203ENST00000610642 RRP7BPQ9NSQ0 103 aa28.19■■■□□ 2.1
SLC6A6-203ENST00000610642 C9orf84Q5VXU9 1444 aa28.19■■■□□ 2.1
SLC6A6-203ENST00000610642 ADGRL2O95490 1459 aa28.19■■■□□ 2.1
SLC6A6-203ENST00000610642 GCC2Q8IWJ2 1684 aa28.17■■■□□ 2.1
SLC6A6-203ENST00000610642 HRCP23327 699 aa28.17■■■□□ 2.1
SLC6A6-203ENST00000610642 ADGRL1O94910 1474 aa28.16■■■□□ 2.1
SLC6A6-203ENST00000610642 NCOA1Q15788 1441 aa28.15■■■□□ 2.1
SLC6A6-203ENST00000610642 ANKRD30AQ9BXX3 1397 aa28.14■■■□□ 2.1
SLC6A6-203ENST00000610642 CCER1Q8TC90 406 aaPredicted RBP28.13■■■□□ 2.09
SLC6A6-203ENST00000610642 MAST1Q9Y2H9 1570 aa28.13■■■□□ 2.09
SLC6A6-203ENST00000610642 NEO1Q92859 1461 aa28.13■■■□□ 2.09
SLC6A6-203ENST00000610642 TRAPPC8Q9Y2L5 1435 aa28.12■■■□□ 2.09
SLC6A6-203ENST00000610642 SCAPERQ9BY12 1400 aa28.12■■■□□ 2.09
SLC6A6-203ENST00000610642 KIF13AQ9H1H9 1805 aa28.08■■■□□ 2.09
SLC6A6-203ENST00000610642 AFAP1Q8N556 730 aa28.04■■■□□ 2.08
SLC6A6-203ENST00000610642 DHX57Q6P158 1386 aaKnown RBP28.03■■■□□ 2.08
SLC6A6-203ENST00000610642 KDM6BO15054 1643 aa28.02■■■□□ 2.08
SLC6A6-203ENST00000610642 KIF15Q9NS87 1388 aa28.02■■■□□ 2.08
SLC6A6-203ENST00000610642 PPRC1Q5VV67 1664 aaKnown RBP28.01■■■□□ 2.08
SLC6A6-203ENST00000610642 TEX14Q8IWB6 1497 aa28.01■■■□□ 2.08
SLC6A6-203ENST00000610642 PLXNC1O60486 1568 aa28.01■■■□□ 2.07
SLC6A6-203ENST00000610642 SPAG9O60271 1321 aaKnown RBP28.01■■■□□ 2.07
SLC6A6-203ENST00000610642 RTEL1-TNFRSF6BF6WH68 1400 aa28.01■■■□□ 2.07
SLC6A6-203ENST00000610642 ZNF518AQ6AHZ1 1483 aa28.01■■■□□ 2.07
SLC6A6-203ENST00000610642 TSPOAP1O95153 1857 aa28■■■□□ 2.07
SLC6A6-203ENST00000610642 POGZQ7Z3K3 1410 aa27.99■■■□□ 2.07
SLC6A6-203ENST00000610642 ACIN1Q9UKV3 1341 aaKnown RBP27.98■■■□□ 2.07
SLC6A6-203ENST00000610642 ANKRD50Q9ULJ7 1429 aa27.97■■■□□ 2.07
SLC6A6-203ENST00000610642 ZFYVE16Q7Z3T8 1539 aa27.97■■■□□ 2.07
SLC6A6-203ENST00000610642 DENND4BO75064 1496 aaPredicted RBP27.96■■■□□ 2.07
SLC6A6-203ENST00000610642 INO80Q9ULG1 1556 aaPredicted RBP27.95■■■□□ 2.06
SLC6A6-203ENST00000610642 KDM5CP41229 1560 aa27.94■■■□□ 2.06
SLC6A6-203ENST00000610642 ATP7AQ04656 1500 aa27.94■■■□□ 2.06
SLC6A6-203ENST00000610642 DUOX2Q9NRD8 1548 aa27.9■■■□□ 2.06
SLC6A6-203ENST00000610642 ZEB1P37275 1124 aaPredicted RBP27.9■■■□□ 2.06
SLC6A6-203ENST00000610642 TRIM52Q96A61 297 aa27.89■■■□□ 2.06
SLC6A6-203ENST00000610642 CLSPNQ9HAW4 1339 aa27.89■■■□□ 2.05
SLC6A6-203ENST00000610642 MYT1LQ9UL68 1186 aa27.88■■■□□ 2.05
SLC6A6-203ENST00000610642 MLH3Q9UHC1 1453 aa27.87■■■□□ 2.05
SLC6A6-203ENST00000610642 RICTORQ6R327 1708 aa27.87■■■□□ 2.05
SLC6A6-203ENST00000610642 RAPGEF3O95398 923 aa27.87■■■□□ 2.05
SLC6A6-203ENST00000610642 KIDINS220Q9ULH0 1771 aa27.86■■■□□ 2.05
SLC6A6-203ENST00000610642 HECW2Q9P2P5 1572 aa27.85■■■□□ 2.05
SLC6A6-203ENST00000610642 ERBINQ96RT1 1412 aa27.85■■■□□ 2.05
SLC6A6-203ENST00000610642 TRHP20396 242 aaPredicted RBP27.81■■■□□ 2.04
SLC6A6-203ENST00000610642 FRMPD1Q5SYB0 1578 aa27.81■■■□□ 2.04
SLC6A6-203ENST00000610642 MPHOSPH9Q99550 1183 aa27.77■■■□□ 2.04
SLC6A6-203ENST00000610642 ZMYM4Q5VZL5 1548 aa27.76■■■□□ 2.04
SLC6A6-203ENST00000610642 DHX29Q7Z478 1369 aaKnown RBP27.76■■■□□ 2.03
SLC6A6-203ENST00000610642 KDM5DQ9BY66 1539 aa27.74■■■□□ 2.03
SLC6A6-203ENST00000610642 UNC13BO14795 1591 aa27.73■■■□□ 2.03
SLC6A6-203ENST00000610642 NUP155O75694 1391 aa27.73■■■□□ 2.03
SLC6A6-203ENST00000610642 PZPP20742 1482 aa27.73■■■□□ 2.03
SLC6A6-203ENST00000610642 ABCA6Q8N139 1617 aa27.73■■■□□ 2.03
SLC6A6-203ENST00000610642 A2MP01023 1474 aa27.72■■■□□ 2.03
SLC6A6-203ENST00000610642 SLC4A1APQ9BWU0 796 aaKnown RBP27.71■■■□□ 2.03
SLC6A6-203ENST00000610642 EIF2AK4Q9P2K8 1649 aaKnown RBP27.7■■■□□ 2.03
SLC6A6-203ENST00000610642 MAGI2Q86UL8 1455 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms