RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 ARHGAP35Q9NRY4 1499 aa11.66□□□□□ -0.54
COL25A1-208ENST00000610288 ABCC8Q09428 1581 aa11.66□□□□□ -0.54
COL25A1-208ENST00000610288 CASC1Q6TDU7 716 aa11.65□□□□□ -0.54
COL25A1-208ENST00000610288 CC2D1BQ5T0F9 858 aaKnown RBP11.65□□□□□ -0.54
COL25A1-208ENST00000610288 PTMSP20962 102 aa11.65□□□□□ -0.54
COL25A1-208ENST00000610288 DCAF11Q8TEB1 546 aa11.65□□□□□ -0.54
COL25A1-208ENST00000610288 FRAT1Q92837 279 aaPredicted RBP11.64□□□□□ -0.55
COL25A1-208ENST00000610288 CHMP4BQ9H444 224 aaKnown RBP11.64□□□□□ -0.55
COL25A1-208ENST00000610288 MAPK8IP3Q9UPT6 1336 aa11.64□□□□□ -0.55
COL25A1-208ENST00000610288 PDE3BQ13370 1112 aa11.64□□□□□ -0.55
COL25A1-208ENST00000610288 RALBP1Q15311 655 aa11.64□□□□□ -0.55
COL25A1-208ENST00000610288 GSE1Q14687 1217 aa11.64□□□□□ -0.55
COL25A1-208ENST00000610288 POGKQ9P215 609 aa11.63□□□□□ -0.55
COL25A1-208ENST00000610288 GOLGA6L3A6NEY3 463 aa11.63□□□□□ -0.55
COL25A1-208ENST00000610288 ZBED9Q6R2W3 1325 aa11.62□□□□□ -0.55
COL25A1-208ENST00000610288 TNNT3P45378 269 aaPredicted RBP11.62□□□□□ -0.55
COL25A1-208ENST00000610288 MROH2BQ7Z745 1585 aa11.62□□□□□ -0.55
COL25A1-208ENST00000610288 KTN1Q86UP2 1357 aaKnown RBP11.62□□□□□ -0.55
COL25A1-208ENST00000610288 GBP4Q96PP9 640 aa11.61□□□□□ -0.55
COL25A1-208ENST00000610288 TMF1P82094 1093 aa11.61□□□□□ -0.55
COL25A1-208ENST00000610288 CHAF1AQ13111 956 aaPredicted RBP11.61□□□□□ -0.55
COL25A1-208ENST00000610288 PDE4AP27815 886 aa11.6□□□□□ -0.55
COL25A1-208ENST00000610288 SLKQ9H2G2 1235 aaPredicted RBP11.6□□□□□ -0.55
COL25A1-208ENST00000610288 EIF4G1Q04637 1599 aaKnown RBP11.6□□□□□ -0.55
COL25A1-208ENST00000610288 LMOD2Q6P5Q4 547 aa11.59□□□□□ -0.55
COL25A1-208ENST00000610288 U2SURPO15042 1029 aaKnown RBP11.59□□□□□ -0.55
COL25A1-208ENST00000610288 FMN1Q68DA7 1419 aa11.58□□□□□ -0.56
COL25A1-208ENST00000610288 CFAP44Q96MT7 982 aa11.58□□□□□ -0.56
COL25A1-208ENST00000610288 GZF1Q9H116 711 aaPredicted RBP11.56□□□□□ -0.56
COL25A1-208ENST00000610288 PRKRIP1Q9H875 184 aaPredicted RBP11.56□□□□□ -0.56
COL25A1-208ENST00000610288 ROCK2O75116 1388 aaKnown RBP11.56□□□□□ -0.56
COL25A1-208ENST00000610288 PKD2Q13563 968 aa11.56□□□□□ -0.56
COL25A1-208ENST00000610288 FOXD1Q16676 465 aa11.55□□□□□ -0.56
COL25A1-208ENST00000610288 SPRYD3Q8NCJ5 442 aa11.55□□□□□ -0.56
COL25A1-208ENST00000610288 NLRP13Q86W25 1043 aa11.55□□□□□ -0.56
COL25A1-208ENST00000610288 MPHOSPH9Q99550 1183 aa11.55□□□□□ -0.56
COL25A1-208ENST00000610288 PDS5BQ9NTI5 1447 aa11.54□□□□□ -0.56
COL25A1-208ENST00000610288 KANK1Q14678 1352 aa11.54□□□□□ -0.56
COL25A1-208ENST00000610288 PLCB2Q00722 1185 aa11.54□□□□□ -0.56
COL25A1-208ENST00000610288 RWDD1Q9H446 243 aaPredicted RBP11.54□□□□□ -0.56
COL25A1-208ENST00000610288 L3MBTL2Q969R5 705 aa11.53□□□□□ -0.56
COL25A1-208ENST00000610288 ZRSR1Q15695 479 aaKnown RBP11.53□□□□□ -0.56
COL25A1-208ENST00000610288 FAM161AQ3B820 660 aa11.53□□□□□ -0.56
COL25A1-208ENST00000610288 PHLDB1Q86UU1 1377 aa11.53□□□□□ -0.56
COL25A1-208ENST00000610288 CENPQQ7L2Z9 268 aaPredicted RBP11.52□□□□□ -0.56
COL25A1-208ENST00000610288 PMFBP1Q8TBY8 1022 aa11.52□□□□□ -0.56
COL25A1-208ENST00000610288 MAP7D2Q96T17 732 aa11.52□□□□□ -0.56
COL25A1-208ENST00000610288 TDRD9Q8NDG6 1382 aaKnown RBP11.52□□□□□ -0.57
COL25A1-208ENST00000610288 RRP1P56182 461 aaKnown RBP11.52□□□□□ -0.57
COL25A1-208ENST00000610288 MORC1Q86VD1 984 aa11.51□□□□□ -0.57
COL25A1-208ENST00000610288 SRPK2P78362 688 aaKnown RBP11.51□□□□□ -0.57
COL25A1-208ENST00000610288 KIAA2012Q0VF49 1180 aa11.51□□□□□ -0.57
COL25A1-208ENST00000610288 CYB5RLQ6IPT4 315 aa11.5□□□□□ -0.57
COL25A1-208ENST00000610288 GGT6Q6P531 493 aa11.5□□□□□ -0.57
COL25A1-208ENST00000610288 NRDCO43847 1150 aa11.5□□□□□ -0.57
COL25A1-208ENST00000610288 GOLGA2Q08379 1002 aa11.5□□□□□ -0.57
COL25A1-208ENST00000610288 SAFB2Q14151 953 aaKnown RBP eCLIP11.5□□□□□ -0.57
COL25A1-208ENST00000610288 TPRNQ4KMQ1 711 aa11.5□□□□□ -0.57
COL25A1-208ENST00000610288 RAPGEF2Q9Y4G8 1499 aa11.49□□□□□ -0.57
COL25A1-208ENST00000610288 TOP2AP11388 1531 aaKnown RBP11.49□□□□□ -0.57
COL25A1-208ENST00000610288 GOLGA6L6A8MZA4 724 aa11.49□□□□□ -0.57
COL25A1-208ENST00000610288 DDX11L8A8MPP1 907 aa11.49□□□□□ -0.57
COL25A1-208ENST00000610288 RRP9O43818 475 aaKnown RBP11.49□□□□□ -0.57
COL25A1-208ENST00000610288 EXOC6Q8TAG9 804 aa11.49□□□□□ -0.57
COL25A1-208ENST00000610288 KIF15Q9NS87 1388 aa11.49□□□□□ -0.57
COL25A1-208ENST00000610288 MTERF4Q7Z6M4 381 aaKnown RBP11.48□□□□□ -0.57
COL25A1-208ENST00000610288 MYBBP1AQ9BQG0 1328 aaKnown RBP11.48□□□□□ -0.57
COL25A1-208ENST00000610288 FAM43AQ8N2R8 423 aa11.48□□□□□ -0.57
COL25A1-208ENST00000610288 IL27Q8NEV9 243 aa11.48□□□□□ -0.57
COL25A1-208ENST00000610288 ARID3AQ99856 593 aa11.48□□□□□ -0.57
COL25A1-208ENST00000610288 NUP155O75694 1391 aa11.47□□□□□ -0.57
COL25A1-208ENST00000610288 IPO8O15397 1037 aaKnown RBP11.47□□□□□ -0.57
COL25A1-208ENST00000610288 CARMIL2Q6F5E8 1435 aa11.46□□□□□ -0.57
COL25A1-208ENST00000610288 SOX12O15370 315 aa11.46□□□□□ -0.57
COL25A1-208ENST00000610288 PDE4CQ08493 712 aa11.46□□□□□ -0.57
COL25A1-208ENST00000610288 OS9Q13438 667 aaPredicted RBP11.46□□□□□ -0.57
COL25A1-208ENST00000610288 MCCP23508 829 aa11.46□□□□□ -0.58
COL25A1-208ENST00000610288 SYAP1Q96A49 352 aaPredicted RBP11.46□□□□□ -0.58
COL25A1-208ENST00000610288 WIZO95785 1651 aa11.46□□□□□ -0.58
COL25A1-208ENST00000610288 SLC4A3P48751 1232 aa11.46□□□□□ -0.58
COL25A1-208ENST00000610288 SMARCA2P51531 1590 aa11.45□□□□□ -0.58
COL25A1-208ENST00000610288 CALD1Q05682 793 aaKnown RBP11.45□□□□□ -0.58
COL25A1-208ENST00000610288 HDGFP51858 240 aaKnown RBP11.44□□□□□ -0.58
COL25A1-208ENST00000610288 MFAP1P55081 439 aaKnown RBP11.44□□□□□ -0.58
COL25A1-208ENST00000610288 STK26Q9P289 416 aa11.44□□□□□ -0.58
COL25A1-208ENST00000610288 TPM2P07951 284 aa11.44□□□□□ -0.58
COL25A1-208ENST00000610288 NFKBIBQ15653 356 aa11.44□□□□□ -0.58
COL25A1-208ENST00000610288 ANKRD30AQ9BXX3 1397 aa11.43□□□□□ -0.58
COL25A1-208ENST00000610288 GOLGA6L4A6NEF3 574 aa11.43□□□□□ -0.58
COL25A1-208ENST00000610288 SKOR2Q2VWA4 1001 aaPredicted RBP11.43□□□□□ -0.58
COL25A1-208ENST00000610288 RUSC2Q8N2Y8 1516 aa11.43□□□□□ -0.58
COL25A1-208ENST00000610288 EFCAB2Q5VUJ9 269 aa11.43□□□□□ -0.58
COL25A1-208ENST00000610288 KCNJ4P48050 445 aa11.42□□□□□ -0.58
COL25A1-208ENST00000610288 APPP05067 770 aa11.42□□□□□ -0.58
COL25A1-208ENST00000610288 CRBNQ96SW2 442 aa11.42□□□□□ -0.58
COL25A1-208ENST00000610288 CENPJQ9HC77 1338 aaPredicted RBP11.42□□□□□ -0.58
COL25A1-208ENST00000610288 FGD1P98174 961 aa11.41□□□□□ -0.58
COL25A1-208ENST00000610288 OSCARQ8IYS5 282 aa11.41□□□□□ -0.58
COL25A1-208ENST00000610288 U2AF1L5P0DN76 240 aaPredicted RBP11.41□□□□□ -0.58
COL25A1-208ENST00000610288 U2AF1Q01081 240 aaKnown RBP eCLIP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms