RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 MS4A4AQ96JQ5 239 aa11.25□□□□□ -0.61
CCDC144B-206ENST00000609959 BCL11BQ9C0K0 894 aaPredicted RBP11.23□□□□□ -0.61
CCDC144B-206ENST00000609959 TMEM92Q6UXU6 159 aa11.22□□□□□ -0.61
CCDC144B-206ENST00000609959 STK24Q9Y6E0 443 aa11.22□□□□□ -0.61
CCDC144B-206ENST00000609959 VARS2Q5ST30 1063 aaKnown RBP11.2□□□□□ -0.62
CCDC144B-206ENST00000609959 STK25O00506 426 aa11.18□□□□□ -0.62
CCDC144B-206ENST00000609959 ECM2O94769 699 aaPredicted RBP11.18□□□□□ -0.62
CCDC144B-206ENST00000609959 GPR153Q6NV75 609 aa11.17□□□□□ -0.62
CCDC144B-206ENST00000609959 ZNF687Q8N1G0 1237 aa11.16□□□□□ -0.62
CCDC144B-206ENST00000609959 FBXO22Q8NEZ5 403 aa11.15□□□□□ -0.62
CCDC144B-206ENST00000609959 ARSIQ5FYB1 569 aa11.11□□□□□ -0.63
CCDC144B-206ENST00000609959 MFRPQ9BY79 579 aa11.11□□□□□ -0.63
CCDC144B-206ENST00000609959 PTGER2P43116 358 aa11.08□□□□□ -0.64
CCDC144B-206ENST00000609959 RNF166Q96A37 237 aaPredicted RBP11.08□□□□□ -0.64
CCDC144B-206ENST00000609959 MYT1LQ9UL68 1186 aa11.07□□□□□ -0.64
CCDC144B-206ENST00000609959 ZNF316A6NFI3 1004 aaPredicted RBP11.05□□□□□ -0.64
CCDC144B-206ENST00000609959 C2orf72A6NCS6 295 aa11.04□□□□□ -0.64
CCDC144B-206ENST00000609959 TMC2Q8TDI7 906 aa11.04□□□□□ -0.64
CCDC144B-206ENST00000609959 KIF3CO14782 793 aa11.02□□□□□ -0.65
CCDC144B-206ENST00000609959 RGL2O15211 777 aa11.01□□□□□ -0.65
CCDC144B-206ENST00000609959 PKD2Q13563 968 aa11.01□□□□□ -0.65
CCDC144B-206ENST00000609959 ANKRD13DQ6ZTN6 518 aa11□□□□□ -0.65
CCDC144B-206ENST00000609959 KHSRPQ92945 711 aaKnown RBP eCLIP11□□□□□ -0.65
CCDC144B-206ENST00000609959 SLC34A2O95436 690 aa10.99□□□□□ -0.65
CCDC144B-206ENST00000609959 PBX2P40425 430 aa10.97□□□□□ -0.65
CCDC144B-206ENST00000609959 NUDT7P0C024 238 aa10.96□□□□□ -0.65
CCDC144B-206ENST00000609959 PCDHGA4Q9Y5G9 962 aa10.95□□□□□ -0.66
CCDC144B-206ENST00000609959 LSM11P83369 360 aaKnown RBP eCLIP10.94□□□□□ -0.66
CCDC144B-206ENST00000609959 PSDA5PKW4 1024 aaPredicted RBP10.92□□□□□ -0.66
CCDC144B-206ENST00000609959 LHX6Q9UPM6 363 aa10.91□□□□□ -0.66
CCDC144B-206ENST00000609959 PPP1R37O75864 691 aa10.87□□□□□ -0.67
CCDC144B-206ENST00000609959 TBC1D12O60347 775 aa10.85□□□□□ -0.67
CCDC144B-206ENST00000609959 HS6ST3Q8IZP7 471 aa10.84□□□□□ -0.67
CCDC144B-206ENST00000609959 ARHGAP33O14559 1287 aa10.83□□□□□ -0.68
CCDC144B-206ENST00000609959 FOXK1P85037 733 aa10.83□□□□□ -0.68
CCDC144B-206ENST00000609959 PTCD2Q8WV60 388 aaKnown RBP10.83□□□□□ -0.68
CCDC144B-206ENST00000609959 GPHNQ9NQX3 736 aaPredicted RBP10.82□□□□□ -0.68
CCDC144B-206ENST00000609959 AXIN2Q9Y2T1 843 aa10.82□□□□□ -0.68
CCDC144B-206ENST00000609959 PLPP6Q8IY26 295 aa10.81□□□□□ -0.68
CCDC144B-206ENST00000609959 RYDENQ9NUL5 291 aaKnown RBP10.81□□□□□ -0.68
CCDC144B-206ENST00000609959 CHGAP10645 457 aaKnown RBP10.78□□□□□ -0.68
CCDC144B-206ENST00000609959 POTEEQ6S8J3 1075 aa10.78□□□□□ -0.68
CCDC144B-206ENST00000609959 PPP4R3BQ5MIZ7 849 aa10.77□□□□□ -0.69
CCDC144B-206ENST00000609959 ADGRD1Q6QNK2 874 aa10.77□□□□□ -0.69
CCDC144B-206ENST00000609959 KCNH8Q96L42 1107 aa10.77□□□□□ -0.69
CCDC144B-206ENST00000609959 HCSTQ9UBK5 93 aa10.77□□□□□ -0.69
CCDC144B-206ENST00000609959 TK2O00142 265 aa10.75□□□□□ -0.69
CCDC144B-206ENST00000609959 STAC3Q96MF2 364 aa10.75□□□□□ -0.69
CCDC144B-206ENST00000609959 KDM4FA0A1W2PPD8 638 aa10.74□□□□□ -0.69
CCDC144B-206ENST00000609959 DSG2Q14126 1118 aa10.74□□□□□ -0.69
CCDC144B-206ENST00000609959 DNAJC5Q9H3Z4 198 aa10.7□□□□□ -0.7
CCDC144B-206ENST00000609959 PSEN2P49810 448 aa10.68□□□□□ -0.7
CCDC144B-206ENST00000609959 PLA2G2EQ9NZK7 142 aa10.68□□□□□ -0.7
CCDC144B-206ENST00000609959 DMRTA1Q5VZB9 504 aa10.66□□□□□ -0.7
CCDC144B-206ENST00000609959 HRO43593 1189 aa10.65□□□□□ -0.7
CCDC144B-206ENST00000609959 PDE4AP27815 886 aa10.64□□□□□ -0.71
CCDC144B-206ENST00000609959 KCNK17Q96T54 332 aa10.64□□□□□ -0.71
CCDC144B-206ENST00000609959 OXER1Q8TDS5 423 aa10.63□□□□□ -0.71
CCDC144B-206ENST00000609959 UPF1Q92900 1129 aaKnown RBP eCLIP10.62□□□□□ -0.71
CCDC144B-206ENST00000609959 NKX1-1Q15270 411 aaPredicted RBP10.61□□□□□ -0.71
CCDC144B-206ENST00000609959 PPP1R15BQ5SWA1 713 aa10.61□□□□□ -0.71
CCDC144B-206ENST00000609959 ZNF454Q8N9F8 522 aa10.61□□□□□ -0.71
CCDC144B-206ENST00000609959 CRISPLD2Q9H0B8 497 aa10.61□□□□□ -0.71
CCDC144B-206ENST00000609959 KCTD12Q96CX2 325 aaKnown RBP10.6□□□□□ -0.71
CCDC144B-206ENST00000609959 BCL2L12Q9HB09 334 aa10.58□□□□□ -0.72
CCDC144B-206ENST00000609959 VPS9D1Q9Y2B5 631 aa10.57□□□□□ -0.72
CCDC144B-206ENST00000609959 PTPREP23469 700 aa10.56□□□□□ -0.72
CCDC144B-206ENST00000609959 SLC4A5Q9BY07 1137 aa10.56□□□□□ -0.72
CCDC144B-206ENST00000609959 GOLGA8CPA6NN73 597 aa10.53□□□□□ -0.72
CCDC144B-206ENST00000609959 FOSBP53539 338 aa10.53□□□□□ -0.72
CCDC144B-206ENST00000609959 DDX27Q96GQ7 796 aaKnown RBP10.52□□□□□ -0.73
CCDC144B-206ENST00000609959 ANO8Q9HCE9 1232 aaPredicted RBP10.52□□□□□ -0.73
CCDC144B-206ENST00000609959 EVI5O60447 810 aa10.51□□□□□ -0.73
CCDC144B-206ENST00000609959 MAP3K9P80192 1104 aa10.51□□□□□ -0.73
CCDC144B-206ENST00000609959 JPH4Q96JJ6 628 aa10.51□□□□□ -0.73
CCDC144B-206ENST00000609959 LARP6Q9BRS8 491 aaKnown RBP10.51□□□□□ -0.73
CCDC144B-206ENST00000609959 NCKAP5LQ9HCH0 1330 aa10.51□□□□□ -0.73
CCDC144B-206ENST00000609959 ZDHHC16Q969W1 377 aa10.5□□□□□ -0.73
CCDC144B-206ENST00000609959 PTPN5P54829 565 aa10.49□□□□□ -0.73
CCDC144B-206ENST00000609959 GTPBP6O43824 516 aaPredicted RBP10.48□□□□□ -0.73
CCDC144B-206ENST00000609959 MRPL50Q8N5N7 158 aaKnown RBP10.48□□□□□ -0.73
CCDC144B-206ENST00000609959 NBPF3Q9H094 633 aa10.48□□□□□ -0.73
CCDC144B-206ENST00000609959 BHMG1C9JSJ3 638 aaPredicted RBP10.46□□□□□ -0.73
CCDC144B-206ENST00000609959 DCAF8L2P0C7V8 631 aa10.46□□□□□ -0.73
CCDC144B-206ENST00000609959 ZBED2Q9BTP6 218 aa10.46□□□□□ -0.73
CCDC144B-206ENST00000609959 WNT2BQ93097 391 aa10.45□□□□□ -0.74
CCDC144B-206ENST00000609959 MFSD10Q14728 455 aa10.43□□□□□ -0.74
CCDC144B-206ENST00000609959 THSD4Q6ZMP0 1018 aa10.43□□□□□ -0.74
CCDC144B-206ENST00000609959 ADAM33Q9BZ11 813 aa10.42□□□□□ -0.74
CCDC144B-206ENST00000609959 RGS20O76081 388 aa10.41□□□□□ -0.74
CCDC144B-206ENST00000609959 IFFO2Q5TF58 517 aa10.41□□□□□ -0.74
CCDC144B-206ENST00000609959 PPP1R3GB7ZBB8 358 aa10.39□□□□□ -0.75
CCDC144B-206ENST00000609959 FBXW7Q969H0 707 aa10.39□□□□□ -0.75
CCDC144B-206ENST00000609959 RABGEF1Q9UJ41 708 aa10.37□□□□□ -0.75
CCDC144B-206ENST00000609959 PHF14O94880 888 aa10.36□□□□□ -0.75
CCDC144B-206ENST00000609959 TYW1BQ6NUM6 668 aa10.36□□□□□ -0.75
CCDC144B-206ENST00000609959 EMILIN3Q9NT22 766 aa10.35□□□□□ -0.75
CCDC144B-206ENST00000609959 PCDHGA10Q9Y5H3 936 aa10.35□□□□□ -0.75
CCDC144B-206ENST00000609959 ANKK1Q8NFD2 765 aa10.34□□□□□ -0.75
CCDC144B-206ENST00000609959 LAPTM4BQ86VI4 370 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms