RNA–Protein interactions for RNA: ENST00000608669.1

LINC00963-212, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 531 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-212ENST00000608669 APLP2Q06481 763 aa19.18■□□□□ 0.66
LINC00963-212ENST00000608669 GPATCH8Q9UKJ3 1502 aaKnown RBP19.18■□□□□ 0.66
LINC00963-212ENST00000608669 AKNAQ7Z591 1439 aa19.17■□□□□ 0.66
LINC00963-212ENST00000608669 MAP3K1Q13233 1512 aa19.17■□□□□ 0.66
LINC00963-212ENST00000608669 ZNF777Q9ULD5 760 aaPredicted RBP19.17■□□□□ 0.66
LINC00963-212ENST00000608669 SAMD9LQ8IVG5 1584 aa19.17■□□□□ 0.66
LINC00963-212ENST00000608669 CCNB3Q8WWL7 1395 aa19.17■□□□□ 0.66
LINC00963-212ENST00000608669 NEO1Q92859 1461 aa19.16■□□□□ 0.66
LINC00963-212ENST00000608669 RAPGEF3O95398 923 aa19.16■□□□□ 0.66
LINC00963-212ENST00000608669 ADGRL1O94910 1474 aa19.16■□□□□ 0.66
LINC00963-212ENST00000608669 ITSN2Q9NZM3 1697 aa19.15■□□□□ 0.66
LINC00963-212ENST00000608669 RICTORQ6R327 1708 aa19.14■□□□□ 0.65
LINC00963-212ENST00000608669 ABCC1P33527 1531 aa19.12■□□□□ 0.65
LINC00963-212ENST00000608669 ARAP3Q8WWN8 1544 aa19.12■□□□□ 0.65
LINC00963-212ENST00000608669 SYCP2Q9BX26 1530 aa19.11■□□□□ 0.65
LINC00963-212ENST00000608669 ARHGEF12Q9NZN5 1544 aa19.11■□□□□ 0.65
LINC00963-212ENST00000608669 ZNF644Q9H582 1327 aaPredicted RBP19.11■□□□□ 0.65
LINC00963-212ENST00000608669 SCAPERQ9BY12 1400 aa19.1■□□□□ 0.65
LINC00963-212ENST00000608669 EFCAB2Q5VUJ9 269 aa19.09■□□□□ 0.65
LINC00963-212ENST00000608669 PHLDB1Q86UU1 1377 aa19.08■□□□□ 0.65
LINC00963-212ENST00000608669 CFDP1Q9UEE9 299 aaPredicted RBP19.08■□□□□ 0.64
LINC00963-212ENST00000608669 DENND4BO75064 1496 aaPredicted RBP19.08■□□□□ 0.64
LINC00963-212ENST00000608669 POGZQ7Z3K3 1410 aa19.06■□□□□ 0.64
LINC00963-212ENST00000608669 TRAPPC8Q9Y2L5 1435 aa19.06■□□□□ 0.64
LINC00963-212ENST00000608669 CAMSAP2Q08AD1 1489 aa19.05■□□□□ 0.64
LINC00963-212ENST00000608669 HNRNPMP52272 730 aaKnown RBP eCLIP19.04■□□□□ 0.64
LINC00963-212ENST00000608669 MYOM3Q5VTT5 1437 aa19.03■□□□□ 0.64
LINC00963-212ENST00000608669 YEATS2Q9ULM3 1422 aa19.02■□□□□ 0.64
LINC00963-212ENST00000608669 AFAP1Q8N556 730 aa19.02■□□□□ 0.64
LINC00963-212ENST00000608669 SIGLEC1Q9BZZ2 1709 aa19.01■□□□□ 0.63
LINC00963-212ENST00000608669 ARHGEF40Q8TER5 1519 aa19■□□□□ 0.63
LINC00963-212ENST00000608669 PTPN23Q9H3S7 1636 aa18.99■□□□□ 0.63
LINC00963-212ENST00000608669 ZMYM4Q5VZL5 1548 aa18.99■□□□□ 0.63
LINC00963-212ENST00000608669 MYT1LQ9UL68 1186 aa18.98■□□□□ 0.63
LINC00963-212ENST00000608669 ZFYVE16Q7Z3T8 1539 aa18.98■□□□□ 0.63
LINC00963-212ENST00000608669 KDM5CP41229 1560 aa18.98■□□□□ 0.63
LINC00963-212ENST00000608669 HECW2Q9P2P5 1572 aa18.98■□□□□ 0.63
LINC00963-212ENST00000608669 ZNF518AQ6AHZ1 1483 aa18.97■□□□□ 0.63
LINC00963-212ENST00000608669 ABCA6Q8N139 1617 aa18.97■□□□□ 0.63
LINC00963-212ENST00000608669 FGD6Q6ZV73 1430 aa18.95■□□□□ 0.62
LINC00963-212ENST00000608669 KIDINS220Q9ULH0 1771 aa18.94■□□□□ 0.62
LINC00963-212ENST00000608669 MBD5Q9P267 1494 aa18.94■□□□□ 0.62
LINC00963-212ENST00000608669 DIP2CQ9Y2E4 1556 aa18.93■□□□□ 0.62
LINC00963-212ENST00000608669 PLEKHH2Q8IVE3 1493 aa18.92■□□□□ 0.62
LINC00963-212ENST00000608669 INO80Q9ULG1 1556 aaPredicted RBP18.92■□□□□ 0.62
LINC00963-212ENST00000608669 ATP7AQ04656 1500 aa18.9■□□□□ 0.62
LINC00963-212ENST00000608669 MIA2Q96PC5 1412 aa18.9■□□□□ 0.62
LINC00963-212ENST00000608669 KIAA1107Q9UPP5 1409 aa18.9■□□□□ 0.62
LINC00963-212ENST00000608669 CCDC141Q6ZP82 1450 aa18.9■□□□□ 0.62
LINC00963-212ENST00000608669 CROCC2H7BZ55 1655 aa18.89■□□□□ 0.61
LINC00963-212ENST00000608669 FAM50AQ14320 339 aaKnown RBP18.89■□□□□ 0.61
LINC00963-212ENST00000608669 ARHGEF5Q12774 1597 aa18.88■□□□□ 0.61
LINC00963-212ENST00000608669 SPAG9O60271 1321 aaKnown RBP18.87■□□□□ 0.61
LINC00963-212ENST00000608669 ADGBQ8N7X0 1667 aa18.86■□□□□ 0.61
LINC00963-212ENST00000608669 TCOF1Q13428 1488 aaKnown RBP18.86■□□□□ 0.61
LINC00963-212ENST00000608669 DNMT1P26358 1616 aaKnown RBP18.85■□□□□ 0.61
LINC00963-212ENST00000608669 MLH3Q9UHC1 1453 aa18.84■□□□□ 0.61
LINC00963-212ENST00000608669 ARID4BQ4LE39 1312 aaPredicted RBP18.84■□□□□ 0.61
LINC00963-212ENST00000608669 MLECQ14165 292 aa18.83■□□□□ 0.6
LINC00963-212ENST00000608669 MAGI2Q86UL8 1455 aa18.83■□□□□ 0.6
LINC00963-212ENST00000608669 ABCC5O15440 1437 aa18.83■□□□□ 0.6
LINC00963-212ENST00000608669 C9orf84Q5VXU9 1444 aa18.83■□□□□ 0.6
LINC00963-212ENST00000608669 ITGAEP38570 1179 aa18.82■□□□□ 0.6
LINC00963-212ENST00000608669 ATP10AO60312 1499 aa18.82■□□□□ 0.6
LINC00963-212ENST00000608669 DAPK1P53355 1430 aa18.82■□□□□ 0.6
LINC00963-212ENST00000608669 CHIC2Q9UKJ5 165 aa18.8■□□□□ 0.6
LINC00963-212ENST00000608669 BCORL1Q5H9F3 1711 aa18.8■□□□□ 0.6
LINC00963-212ENST00000608669 KDM4FA0A1W2PPD8 638 aa18.79■□□□□ 0.6
LINC00963-212ENST00000608669 MADDQ8WXG6 1647 aa18.78■□□□□ 0.6
LINC00963-212ENST00000608669 MAST1Q9Y2H9 1570 aa18.77■□□□□ 0.6
LINC00963-212ENST00000608669 PTPRKQ15262 1439 aa18.76■□□□□ 0.59
LINC00963-212ENST00000608669 PLPPR3Q6T4P5 718 aa18.75■□□□□ 0.59
LINC00963-212ENST00000608669 A2MP01023 1474 aa18.75■□□□□ 0.59
LINC00963-212ENST00000608669 PLXNC1O60486 1568 aa18.75■□□□□ 0.59
LINC00963-212ENST00000608669 RIMS1Q86UR5 1692 aaKnown RBP18.75■□□□□ 0.59
LINC00963-212ENST00000608669 ADAMTSL3P82987 1691 aa18.73■□□□□ 0.59
LINC00963-212ENST00000608669 TSPY4P0CV99 314 aa18.73■□□□□ 0.59
LINC00963-212ENST00000608669 TSPY10P0CW01 314 aa18.73■□□□□ 0.59
LINC00963-212ENST00000608669 RRBP1Q9P2E9 1410 aaKnown RBP18.73■□□□□ 0.59
LINC00963-212ENST00000608669 FER1L4A9Z1Z3 1794 aa18.73■□□□□ 0.59
LINC00963-212ENST00000608669 REREQ9P2R6 1566 aa18.72■□□□□ 0.59
LINC00963-212ENST00000608669 SHANK2Q9UPX8 1470 aa18.72■□□□□ 0.59
LINC00963-212ENST00000608669 RRP7BPQ9NSQ0 103 aa18.71■□□□□ 0.59
LINC00963-212ENST00000608669 RTEL1-TNFRSF6BF6WH68 1400 aa18.71■□□□□ 0.59
LINC00963-212ENST00000608669 KIF15Q9NS87 1388 aa18.68■□□□□ 0.58
LINC00963-212ENST00000608669 AGLP35573 1532 aa18.66■□□□□ 0.58
LINC00963-212ENST00000608669 RSPH4AQ5TD94 716 aa18.66■□□□□ 0.58
LINC00963-212ENST00000608669 CLTCQ00610 1675 aaKnown RBP18.64■□□□□ 0.57
LINC00963-212ENST00000608669 GGT6Q6P531 493 aa18.64■□□□□ 0.57
LINC00963-212ENST00000608669 DHX29Q7Z478 1369 aaKnown RBP18.64■□□□□ 0.57
LINC00963-212ENST00000608669 KIF3BO15066 747 aa18.63■□□□□ 0.57
LINC00963-212ENST00000608669 ADGRL2O95490 1459 aa18.63■□□□□ 0.57
LINC00963-212ENST00000608669 DUOX2Q9NRD8 1548 aa18.63■□□□□ 0.57
LINC00963-212ENST00000608669 ANKRD30AQ9BXX3 1397 aa18.62■□□□□ 0.57
LINC00963-212ENST00000608669 NCOA1Q15788 1441 aa18.62■□□□□ 0.57
LINC00963-212ENST00000608669 MROH1Q8NDA8 1641 aa18.6■□□□□ 0.57
LINC00963-212ENST00000608669 PTPRMP28827 1452 aa18.6■□□□□ 0.57
LINC00963-212ENST00000608669 CEP152O94986 1710 aa18.6■□□□□ 0.57
LINC00963-212ENST00000608669 AEBP2Q6ZN18 517 aaPredicted RBP18.59■□□□□ 0.57
LINC00963-212ENST00000608669 EIF2AK4Q9P2K8 1649 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms