RNA–Protein interactions for RNA: ENST00000608223.6

LINC00854-213, Long intergenic non-protein coding RNA 854, humanhuman

APPRIS ALT2 TSL 5

Gene LINC00854, Length 391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854-213ENST00000608223 ZFYVE16Q7Z3T8 1539 aa23.18■■□□□ 1.3
LINC00854-213ENST00000608223 YEATS2Q9ULM3 1422 aa23.17■■□□□ 1.3
LINC00854-213ENST00000608223 PCF11O94913 1555 aaKnown RBP23.16■■□□□ 1.3
LINC00854-213ENST00000608223 CLIP1P30622 1438 aa23.16■■□□□ 1.3
LINC00854-213ENST00000608223 POGZQ7Z3K3 1410 aa23.15■■□□□ 1.3
LINC00854-213ENST00000608223 SIGLEC1Q9BZZ2 1709 aa23.14■■□□□ 1.3
LINC00854-213ENST00000608223 RIMS1Q86UR5 1692 aaKnown RBP23.14■■□□□ 1.29
LINC00854-213ENST00000608223 CASKIN1Q8WXD9 1431 aa23.14■■□□□ 1.29
LINC00854-213ENST00000608223 MAGI2Q86UL8 1455 aa23.13■■□□□ 1.29
LINC00854-213ENST00000608223 ARHGAP5Q13017 1502 aa23.13■■□□□ 1.29
LINC00854-213ENST00000608223 CDC42BPBQ9Y5S2 1711 aa23.1■■□□□ 1.29
LINC00854-213ENST00000608223 CCDC18Q5T9S5 1454 aa23.1■■□□□ 1.29
LINC00854-213ENST00000608223 MLECQ14165 292 aa23.08■■□□□ 1.29
LINC00854-213ENST00000608223 PLPPR3Q6T4P5 718 aa23.07■■□□□ 1.28
LINC00854-213ENST00000608223 ILDR1Q86SU0 546 aaPredicted RBP23.06■■□□□ 1.28
LINC00854-213ENST00000608223 AFAP1Q8N556 730 aa23.04■■□□□ 1.28
LINC00854-213ENST00000608223 ATP10AO60312 1499 aa23.04■■□□□ 1.28
LINC00854-213ENST00000608223 ZNF518AQ6AHZ1 1483 aa23.04■■□□□ 1.28
LINC00854-213ENST00000608223 FYCO1Q9BQS8 1478 aa23.04■■□□□ 1.28
LINC00854-213ENST00000608223 MYT1LQ9UL68 1186 aa23.03■■□□□ 1.28
LINC00854-213ENST00000608223 FER1L4A9Z1Z3 1794 aa23.03■■□□□ 1.28
LINC00854-213ENST00000608223 PREX2Q70Z35 1606 aa23.03■■□□□ 1.28
LINC00854-213ENST00000608223 C9orf84Q5VXU9 1444 aa23■■□□□ 1.27
LINC00854-213ENST00000608223 CDC42BPAQ5VT25 1732 aa23■■□□□ 1.27
LINC00854-213ENST00000608223 KDM5CP41229 1560 aa22.99■■□□□ 1.27
LINC00854-213ENST00000608223 LMTK3Q96Q04 1460 aa22.97■■□□□ 1.27
LINC00854-213ENST00000608223 ABCC1P33527 1531 aa22.95■■□□□ 1.26
LINC00854-213ENST00000608223 ITSN2Q9NZM3 1697 aa22.95■■□□□ 1.26
LINC00854-213ENST00000608223 ARHGEF12Q9NZN5 1544 aa22.95■■□□□ 1.26
LINC00854-213ENST00000608223 DIP2CQ9Y2E4 1556 aa22.93■■□□□ 1.26
LINC00854-213ENST00000608223 TRAPPC8Q9Y2L5 1435 aa22.93■■□□□ 1.26
LINC00854-213ENST00000608223 ZNF777Q9ULD5 760 aaPredicted RBP22.92■■□□□ 1.26
LINC00854-213ENST00000608223 ABCA6Q8N139 1617 aa22.91■■□□□ 1.26
LINC00854-213ENST00000608223 MLH3Q9UHC1 1453 aa22.91■■□□□ 1.26
LINC00854-213ENST00000608223 HSPA2P54652 639 aa22.9■■□□□ 1.26
LINC00854-213ENST00000608223 GPATCH8Q9UKJ3 1502 aaKnown RBP22.87■■□□□ 1.25
LINC00854-213ENST00000608223 KIDINS220Q9ULH0 1771 aa22.86■■□□□ 1.25
LINC00854-213ENST00000608223 SAMD9LQ8IVG5 1584 aa22.86■■□□□ 1.25
LINC00854-213ENST00000608223 REREQ9P2R6 1566 aa22.86■■□□□ 1.25
LINC00854-213ENST00000608223 CEBPAP49715 358 aaPredicted RBP22.86■■□□□ 1.25
LINC00854-213ENST00000608223 MTUS2Q5JR59 1369 aa22.84■■□□□ 1.25
LINC00854-213ENST00000608223 CEP162Q5TB80 1403 aa22.82■■□□□ 1.24
LINC00854-213ENST00000608223 SYCP2Q9BX26 1530 aa22.82■■□□□ 1.24
LINC00854-213ENST00000608223 CCNB3Q8WWL7 1395 aa22.82■■□□□ 1.24
LINC00854-213ENST00000608223 HNRNPMP52272 730 aaKnown RBP eCLIP22.82■■□□□ 1.24
LINC00854-213ENST00000608223 CFDP1Q9UEE9 299 aaPredicted RBP22.82■■□□□ 1.24
LINC00854-213ENST00000608223 PREX1Q8TCU6 1659 aa22.8■■□□□ 1.24
LINC00854-213ENST00000608223 SETD1BQ9UPS6 1966 aaKnown RBP22.8■■□□□ 1.24
LINC00854-213ENST00000608223 AGLP35573 1532 aa22.79■■□□□ 1.24
LINC00854-213ENST00000608223 ESF1Q9H501 851 aaKnown RBP22.77■■□□□ 1.24
LINC00854-213ENST00000608223 SPAG9O60271 1321 aaKnown RBP22.77■■□□□ 1.24
LINC00854-213ENST00000608223 C3P01024 1663 aa22.76■■□□□ 1.23
LINC00854-213ENST00000608223 KIAA1107Q9UPP5 1409 aa22.74■■□□□ 1.23
LINC00854-213ENST00000608223 SUPT6HQ7KZ85 1726 aaKnown RBP22.74■■□□□ 1.23
LINC00854-213ENST00000608223 PLEKHH2Q8IVE3 1493 aa22.74■■□□□ 1.23
LINC00854-213ENST00000608223 EHBP1L1Q8N3D4 1523 aa22.74■■□□□ 1.23
LINC00854-213ENST00000608223 TIAM1Q13009 1591 aa22.73■■□□□ 1.23
LINC00854-213ENST00000608223 FBXO41Q8TF61 875 aa22.73■■□□□ 1.23
LINC00854-213ENST00000608223 ATP7AQ04656 1500 aa22.72■■□□□ 1.23
LINC00854-213ENST00000608223 ZNF644Q9H582 1327 aaPredicted RBP22.71■■□□□ 1.23
LINC00854-213ENST00000608223 LOC105371045A0A1W2PR82 267 aa22.7■■□□□ 1.22
LINC00854-213ENST00000608223 INO80Q9ULG1 1556 aaPredicted RBP22.69■■□□□ 1.22
LINC00854-213ENST00000608223 UHRF1BP1Q6BDS2 1440 aa22.69■■□□□ 1.22
LINC00854-213ENST00000608223 CNTLNQ9NXG0 1405 aa22.65■■□□□ 1.22
LINC00854-213ENST00000608223 STRCQ7RTU9 1775 aa22.65■■□□□ 1.22
LINC00854-213ENST00000608223 A2MP01023 1474 aa22.65■■□□□ 1.22
LINC00854-213ENST00000608223 MROH2AA6NES4 1674 aa22.62■■□□□ 1.21
LINC00854-213ENST00000608223 ADGBQ8N7X0 1667 aa22.62■■□□□ 1.21
LINC00854-213ENST00000608223 MBD5Q9P267 1494 aa22.62■■□□□ 1.21
LINC00854-213ENST00000608223 PLXNC1O60486 1568 aa22.62■■□□□ 1.21
LINC00854-213ENST00000608223 NCOA2Q15596 1464 aa22.61■■□□□ 1.21
LINC00854-213ENST00000608223 CLTCQ00610 1675 aaKnown RBP22.61■■□□□ 1.21
LINC00854-213ENST00000608223 GGT6Q6P531 493 aa22.6■■□□□ 1.21
LINC00854-213ENST00000608223 ZMYM3Q14202 1370 aa22.59■■□□□ 1.21
LINC00854-213ENST00000608223 CERKQ8TCT0 537 aa22.57■■□□□ 1.2
LINC00854-213ENST00000608223 DMRT2Q9Y5R5 561 aa22.57■■□□□ 1.2
LINC00854-213ENST00000608223 VPS8Q8N3P4 1428 aa22.57■■□□□ 1.2
LINC00854-213ENST00000608223 CAMSAP2Q08AD1 1489 aa22.55■■□□□ 1.2
LINC00854-213ENST00000608223 RTEL1-TNFRSF6BF6WH68 1400 aa22.55■■□□□ 1.2
LINC00854-213ENST00000608223 NPATQ14207 1427 aa22.53■■□□□ 1.2
LINC00854-213ENST00000608223 CCDC141Q6ZP82 1450 aa22.53■■□□□ 1.2
LINC00854-213ENST00000608223 LRRC9Q6ZRR7 1453 aa22.52■■□□□ 1.2
LINC00854-213ENST00000608223 DHX29Q7Z478 1369 aaKnown RBP22.5■■□□□ 1.19
LINC00854-213ENST00000608223 RSPH4AQ5TD94 716 aa22.49■■□□□ 1.19
LINC00854-213ENST00000608223 PPP6R1Q9UPN7 881 aa22.49■■□□□ 1.19
LINC00854-213ENST00000608223 KANK4Q5T7N3 995 aaPredicted RBP22.47■■□□□ 1.19
LINC00854-213ENST00000608223 PTPRTO14522 1441 aa22.47■■□□□ 1.19
LINC00854-213ENST00000608223 PTPRKQ15262 1439 aa22.47■■□□□ 1.19
LINC00854-213ENST00000608223 CAMSAP1Q5T5Y3 1602 aa22.46■■□□□ 1.19
LINC00854-213ENST00000608223 KIF3BO15066 747 aa22.46■■□□□ 1.19
LINC00854-213ENST00000608223 NCOA1Q15788 1441 aa22.46■■□□□ 1.19
LINC00854-213ENST00000608223 ARHGEF5Q12774 1597 aa22.46■■□□□ 1.19
LINC00854-213ENST00000608223 MYO3AQ8NEV4 1616 aa22.45■■□□□ 1.18
LINC00854-213ENST00000608223 TSPY4P0CV99 314 aa22.44■■□□□ 1.18
LINC00854-213ENST00000608223 TSPY10P0CW01 314 aa22.44■■□□□ 1.18
LINC00854-213ENST00000608223 MAP3K1Q13233 1512 aa22.43■■□□□ 1.18
LINC00854-213ENST00000608223 ZNF142P52746 1687 aaPredicted RBP22.42■■□□□ 1.18
LINC00854-213ENST00000608223 CEP170BQ9Y4F5 1589 aaPredicted RBP22.4■■□□□ 1.18
LINC00854-213ENST00000608223 NCKAP5LQ9HCH0 1330 aa22.39■■□□□ 1.18
LINC00854-213ENST00000608223 MYOM3Q5VTT5 1437 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms