RNA–Protein interactions for RNA: ENST00000608080.1

LINC01440-205, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 3 BASIC

Gene LINC01440, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-205ENST00000608080 TMEM92Q6UXU6 159 aa13.52□□□□□ -0.25
LINC01440-205ENST00000608080 VARS2Q5ST30 1063 aaKnown RBP13.51□□□□□ -0.25
LINC01440-205ENST00000608080 NLRP6P59044 892 aa13.48□□□□□ -0.25
LINC01440-205ENST00000608080 GPR153Q6NV75 609 aa13.44□□□□□ -0.26
LINC01440-205ENST00000608080 ZNF687Q8N1G0 1237 aa13.43□□□□□ -0.26
LINC01440-205ENST00000608080 RNF166Q96A37 237 aaPredicted RBP13.43□□□□□ -0.26
LINC01440-205ENST00000608080 BCL11BQ9C0K0 894 aaPredicted RBP13.43□□□□□ -0.26
LINC01440-205ENST00000608080 STK24Q9Y6E0 443 aa13.4□□□□□ -0.26
LINC01440-205ENST00000608080 PTGER2P43116 358 aa13.39□□□□□ -0.27
LINC01440-205ENST00000608080 FBXO22Q8NEZ5 403 aa13.39□□□□□ -0.27
LINC01440-205ENST00000608080 MYT1LQ9UL68 1186 aa13.37□□□□□ -0.27
LINC01440-205ENST00000608080 ARSIQ5FYB1 569 aa13.35□□□□□ -0.27
LINC01440-205ENST00000608080 STK25O00506 426 aa13.33□□□□□ -0.28
LINC01440-205ENST00000608080 MFRPQ9BY79 579 aa13.32□□□□□ -0.28
LINC01440-205ENST00000608080 ZNF316A6NFI3 1004 aaPredicted RBP13.31□□□□□ -0.28
LINC01440-205ENST00000608080 ECM2O94769 699 aaPredicted RBP13.29□□□□□ -0.28
LINC01440-205ENST00000608080 KIF3CO14782 793 aa13.27□□□□□ -0.29
LINC01440-205ENST00000608080 C2orf72A6NCS6 295 aa13.24□□□□□ -0.29
LINC01440-205ENST00000608080 KHSRPQ92945 711 aaKnown RBP eCLIP13.24□□□□□ -0.29
LINC01440-205ENST00000608080 ANKRD13DQ6ZTN6 518 aa13.22□□□□□ -0.29
LINC01440-205ENST00000608080 PBX2P40425 430 aa13.21□□□□□ -0.29
LINC01440-205ENST00000608080 LSM11P83369 360 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC01440-205ENST00000608080 TMC2Q8TDI7 906 aa13.21□□□□□ -0.29
LINC01440-205ENST00000608080 SLC34A2O95436 690 aa13.2□□□□□ -0.3
LINC01440-205ENST00000608080 NUDT7P0C024 238 aa13.19□□□□□ -0.3
LINC01440-205ENST00000608080 PCDHGA4Q9Y5G9 962 aa13.15□□□□□ -0.3
LINC01440-205ENST00000608080 RGL2O15211 777 aa13.13□□□□□ -0.31
LINC01440-205ENST00000608080 LHX6Q9UPM6 363 aa13.13□□□□□ -0.31
LINC01440-205ENST00000608080 PKD2Q13563 968 aa13.12□□□□□ -0.31
LINC01440-205ENST00000608080 PSDA5PKW4 1024 aaPredicted RBP13.11□□□□□ -0.31
LINC01440-205ENST00000608080 AXIN2Q9Y2T1 843 aa13.03□□□□□ -0.32
LINC01440-205ENST00000608080 POTEEQ6S8J3 1075 aa13.02□□□□□ -0.33
LINC01440-205ENST00000608080 PPP1R37O75864 691 aa13.01□□□□□ -0.33
LINC01440-205ENST00000608080 ARHGAP33O14559 1287 aa13□□□□□ -0.33
LINC01440-205ENST00000608080 PTCD2Q8WV60 388 aaKnown RBP12.99□□□□□ -0.33
LINC01440-205ENST00000608080 FOXK1P85037 733 aa12.98□□□□□ -0.33
LINC01440-205ENST00000608080 ADGRD1Q6QNK2 874 aa12.98□□□□□ -0.33
LINC01440-205ENST00000608080 HCSTQ9UBK5 93 aa12.97□□□□□ -0.33
LINC01440-205ENST00000608080 HS6ST3Q8IZP7 471 aa12.95□□□□□ -0.34
LINC01440-205ENST00000608080 TBC1D12O60347 775 aa12.94□□□□□ -0.34
LINC01440-205ENST00000608080 PPP4R3BQ5MIZ7 849 aa12.94□□□□□ -0.34
LINC01440-205ENST00000608080 PLPP6Q8IY26 295 aa12.94□□□□□ -0.34
LINC01440-205ENST00000608080 TK2O00142 265 aa12.93□□□□□ -0.34
LINC01440-205ENST00000608080 GPHNQ9NQX3 736 aaPredicted RBP12.93□□□□□ -0.34
LINC01440-205ENST00000608080 KDM4FA0A1W2PPD8 638 aa12.92□□□□□ -0.34
LINC01440-205ENST00000608080 KCNH8Q96L42 1107 aa12.91□□□□□ -0.34
LINC01440-205ENST00000608080 PLA2G2EQ9NZK7 142 aa12.91□□□□□ -0.34
LINC01440-205ENST00000608080 AMER1Q5JTC6 1135 aaPredicted RBP12.88□□□□□ -0.35
LINC01440-205ENST00000608080 DSG2Q14126 1118 aa12.86□□□□□ -0.35
LINC01440-205ENST00000608080 PSEN2P49810 448 aa12.85□□□□□ -0.35
LINC01440-205ENST00000608080 STAC3Q96MF2 364 aa12.85□□□□□ -0.35
LINC01440-205ENST00000608080 RYDENQ9NUL5 291 aaKnown RBP12.85□□□□□ -0.35
LINC01440-205ENST00000608080 HRO43593 1189 aa12.84□□□□□ -0.35
LINC01440-205ENST00000608080 DMRTA1Q5VZB9 504 aa12.84□□□□□ -0.35
LINC01440-205ENST00000608080 RTN4Q9NQC3 1192 aaKnown RBP12.82□□□□□ -0.36
LINC01440-205ENST00000608080 CHGAP10645 457 aaKnown RBP12.8□□□□□ -0.36
LINC01440-205ENST00000608080 KCNK17Q96T54 332 aa12.79□□□□□ -0.36
LINC01440-205ENST00000608080 DNAJC5Q9H3Z4 198 aa12.78□□□□□ -0.36
LINC01440-205ENST00000608080 KCTD12Q96CX2 325 aaKnown RBP12.76□□□□□ -0.37
LINC01440-205ENST00000608080 OXER1Q8TDS5 423 aa12.75□□□□□ -0.37
LINC01440-205ENST00000608080 UPF1Q92900 1129 aaKnown RBP eCLIP12.73□□□□□ -0.37
LINC01440-205ENST00000608080 PPP1R15BQ5SWA1 713 aa12.72□□□□□ -0.37
LINC01440-205ENST00000608080 ZNF454Q8N9F8 522 aa12.72□□□□□ -0.37
LINC01440-205ENST00000608080 CRISPLD2Q9H0B8 497 aa12.72□□□□□ -0.37
LINC01440-205ENST00000608080 BCL2L12Q9HB09 334 aa12.7□□□□□ -0.38
LINC01440-205ENST00000608080 VPS9D1Q9Y2B5 631 aa12.7□□□□□ -0.38
LINC01440-205ENST00000608080 SLC4A5Q9BY07 1137 aa12.69□□□□□ -0.38
LINC01440-205ENST00000608080 NKX1-1Q15270 411 aaPredicted RBP12.67□□□□□ -0.38
LINC01440-205ENST00000608080 PTPREP23469 700 aa12.66□□□□□ -0.38
LINC01440-205ENST00000608080 PDE4AP27815 886 aa12.65□□□□□ -0.38
LINC01440-205ENST00000608080 FOSBP53539 338 aa12.64□□□□□ -0.39
LINC01440-205ENST00000608080 JPH4Q96JJ6 628 aa12.64□□□□□ -0.39
LINC01440-205ENST00000608080 PTPN5P54829 565 aa12.62□□□□□ -0.39
LINC01440-205ENST00000608080 GOLGA8CPA6NN73 597 aa12.61□□□□□ -0.39
LINC01440-205ENST00000608080 ZBED2Q9BTP6 218 aa12.59□□□□□ -0.39
LINC01440-205ENST00000608080 NCKAP5LQ9HCH0 1330 aa12.59□□□□□ -0.39
LINC01440-205ENST00000608080 THSD4Q6ZMP0 1018 aa12.58□□□□□ -0.4
LINC01440-205ENST00000608080 MRPL50Q8N5N7 158 aaKnown RBP12.58□□□□□ -0.4
LINC01440-205ENST00000608080 NBPF3Q9H094 633 aa12.58□□□□□ -0.4
LINC01440-205ENST00000608080 ANO8Q9HCE9 1232 aaPredicted RBP12.58□□□□□ -0.4
LINC01440-205ENST00000608080 BHMG1C9JSJ3 638 aaPredicted RBP12.57□□□□□ -0.4
LINC01440-205ENST00000608080 EVI5O60447 810 aa12.57□□□□□ -0.4
LINC01440-205ENST00000608080 IFFO2Q5TF58 517 aa12.57□□□□□ -0.4
LINC01440-205ENST00000608080 ZDHHC16Q969W1 377 aa12.57□□□□□ -0.4
LINC01440-205ENST00000608080 DDX27Q96GQ7 796 aaKnown RBP12.57□□□□□ -0.4
LINC01440-205ENST00000608080 RGS20O76081 388 aa12.55□□□□□ -0.4
LINC01440-205ENST00000608080 WNT2BQ93097 391 aa12.55□□□□□ -0.4
LINC01440-205ENST00000608080 MAP3K9P80192 1104 aa12.52□□□□□ -0.41
LINC01440-205ENST00000608080 LARP6Q9BRS8 491 aaKnown RBP12.52□□□□□ -0.41
LINC01440-205ENST00000608080 ADAM33Q9BZ11 813 aa12.51□□□□□ -0.41
LINC01440-205ENST00000608080 PPP1R3GB7ZBB8 358 aa12.5□□□□□ -0.41
LINC01440-205ENST00000608080 MFSD10Q14728 455 aa12.49□□□□□ -0.41
LINC01440-205ENST00000608080 GTPBP6O43824 516 aaPredicted RBP12.48□□□□□ -0.41
LINC01440-205ENST00000608080 A0A0G2JS52 829 aa12.46□□□□□ -0.41
LINC01440-205ENST00000608080 FBXW7Q969H0 707 aa12.44□□□□□ -0.42
LINC01440-205ENST00000608080 ANKK1Q8NFD2 765 aa12.43□□□□□ -0.42
LINC01440-205ENST00000608080 RABGEF1Q9UJ41 708 aa12.43□□□□□ -0.42
LINC01440-205ENST00000608080 TYW1BQ6NUM6 668 aa12.4□□□□□ -0.42
LINC01440-205ENST00000608080 EMILIN3Q9NT22 766 aa12.4□□□□□ -0.42
LINC01440-205ENST00000608080 PCDHGA10Q9Y5H3 936 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms