RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, humanhuman

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-208ENST00000607559 TROQ12816 1431 aaPredicted RBP17.43■□□□□ 0.38
TPM2-208ENST00000607559 FANCAO15360 1455 aa17.43■□□□□ 0.38
TPM2-208ENST00000607559 CLIP1P30622 1438 aa17.41■□□□□ 0.38
TPM2-208ENST00000607559 ATP1B4Q9UN42 357 aaPredicted RBP17.41■□□□□ 0.38
TPM2-208ENST00000607559 DENND4BO75064 1496 aaPredicted RBP17.41■□□□□ 0.38
TPM2-208ENST00000607559 TTC37Q6PGP7 1564 aa17.4■□□□□ 0.38
TPM2-208ENST00000607559 EFCAB2Q5VUJ9 269 aa17.39■□□□□ 0.37
TPM2-208ENST00000607559 CCDC18Q5T9S5 1454 aa17.38■□□□□ 0.37
TPM2-208ENST00000607559 FRMPD1Q5SYB0 1578 aa17.38■□□□□ 0.37
TPM2-208ENST00000607559 CFAP74Q9C0B2 1584 aa17.37■□□□□ 0.37
TPM2-208ENST00000607559 FYCO1Q9BQS8 1478 aa17.37■□□□□ 0.37
TPM2-208ENST00000607559 MAGI2Q86UL8 1455 aa17.36■□□□□ 0.37
TPM2-208ENST00000607559 ZMYM4Q5VZL5 1548 aa17.33■□□□□ 0.37
TPM2-208ENST00000607559 SCAPERQ9BY12 1400 aa17.33■□□□□ 0.36
TPM2-208ENST00000607559 RICTORQ6R327 1708 aa17.32■□□□□ 0.36
TPM2-208ENST00000607559 LRRIQ1Q96JM4 1722 aa17.32■□□□□ 0.36
TPM2-208ENST00000607559 PCF11O94913 1555 aaKnown RBP17.32■□□□□ 0.36
TPM2-208ENST00000607559 KIF14Q15058 1648 aa17.31■□□□□ 0.36
TPM2-208ENST00000607559 POGZQ7Z3K3 1410 aa17.3■□□□□ 0.36
TPM2-208ENST00000607559 HECW2Q9P2P5 1572 aa17.28■□□□□ 0.36
TPM2-208ENST00000607559 ARHGEF40Q8TER5 1519 aa17.26■□□□□ 0.35
TPM2-208ENST00000607559 CEP162Q5TB80 1403 aa17.26■□□□□ 0.35
TPM2-208ENST00000607559 ARID4BQ4LE39 1312 aaPredicted RBP17.25■□□□□ 0.35
TPM2-208ENST00000607559 MYO5CQ9NQX4 1742 aa17.25■□□□□ 0.35
TPM2-208ENST00000607559 ADAMTSL3P82987 1691 aa17.25■□□□□ 0.35
TPM2-208ENST00000607559 YEATS2Q9ULM3 1422 aa17.24■□□□□ 0.35
TPM2-208ENST00000607559 ZNF518AQ6AHZ1 1483 aa17.24■□□□□ 0.35
TPM2-208ENST00000607559 ARHGAP5Q13017 1502 aa17.22■□□□□ 0.35
TPM2-208ENST00000607559 ZFYVE16Q7Z3T8 1539 aa17.22■□□□□ 0.35
TPM2-208ENST00000607559 AFAP1Q8N556 730 aa17.22■□□□□ 0.35
TPM2-208ENST00000607559 ATP10AO60312 1499 aa17.22■□□□□ 0.35
TPM2-208ENST00000607559 KDM5CP41229 1560 aa17.21■□□□□ 0.35
TPM2-208ENST00000607559 PTPRMP28827 1452 aa17.21■□□□□ 0.35
TPM2-208ENST00000607559 MLH3Q9UHC1 1453 aa17.2■□□□□ 0.34
TPM2-208ENST00000607559 GPATCH8Q9UKJ3 1502 aaKnown RBP17.2■□□□□ 0.34
TPM2-208ENST00000607559 BCORL1Q5H9F3 1711 aa17.19■□□□□ 0.34
TPM2-208ENST00000607559 CDC42BPBQ9Y5S2 1711 aa17.19■□□□□ 0.34
TPM2-208ENST00000607559 LOC105371045A0A1W2PR82 267 aa17.19■□□□□ 0.34
TPM2-208ENST00000607559 PREX2Q70Z35 1606 aa17.18■□□□□ 0.34
TPM2-208ENST00000607559 ARHGEF12Q9NZN5 1544 aa17.18■□□□□ 0.34
TPM2-208ENST00000607559 KIAA1107Q9UPP5 1409 aa17.17■□□□□ 0.34
TPM2-208ENST00000607559 TRAPPC8Q9Y2L5 1435 aa17.16■□□□□ 0.34
TPM2-208ENST00000607559 MTUS2Q5JR59 1369 aa17.15■□□□□ 0.34
TPM2-208ENST00000607559 C9orf84Q5VXU9 1444 aa17.15■□□□□ 0.34
TPM2-208ENST00000607559 ILDR1Q86SU0 546 aaPredicted RBP17.15■□□□□ 0.34
TPM2-208ENST00000607559 ABCC1P33527 1531 aa17.15■□□□□ 0.34
TPM2-208ENST00000607559 REREQ9P2R6 1566 aa17.14■□□□□ 0.33
TPM2-208ENST00000607559 MADDQ8WXG6 1647 aa17.14■□□□□ 0.33
TPM2-208ENST00000607559 CFDP1Q9UEE9 299 aaPredicted RBP17.13■□□□□ 0.33
TPM2-208ENST00000607559 CDC42BPAQ5VT25 1732 aa17.13■□□□□ 0.33
TPM2-208ENST00000607559 CCNB3Q8WWL7 1395 aa17.12■□□□□ 0.33
TPM2-208ENST00000607559 SIGLEC1Q9BZZ2 1709 aa17.11■□□□□ 0.33
TPM2-208ENST00000607559 PLEKHH2Q8IVE3 1493 aa17.11■□□□□ 0.33
TPM2-208ENST00000607559 VPS8Q8N3P4 1428 aa17.1■□□□□ 0.33
TPM2-208ENST00000607559 AGLP35573 1532 aa17.09■□□□□ 0.33
TPM2-208ENST00000607559 EHBP1L1Q8N3D4 1523 aa17.09■□□□□ 0.33
TPM2-208ENST00000607559 SAMD9LQ8IVG5 1584 aa17.07■□□□□ 0.32
TPM2-208ENST00000607559 DIP2CQ9Y2E4 1556 aa17.07■□□□□ 0.32
TPM2-208ENST00000607559 MAP3K1Q13233 1512 aa17.07■□□□□ 0.32
TPM2-208ENST00000607559 HNRNPMP52272 730 aaKnown RBP eCLIP17.07■□□□□ 0.32
TPM2-208ENST00000607559 RIMS1Q86UR5 1692 aaKnown RBP17.07■□□□□ 0.32
TPM2-208ENST00000607559 ZNF777Q9ULD5 760 aaPredicted RBP17.06■□□□□ 0.32
TPM2-208ENST00000607559 ITSN2Q9NZM3 1697 aa17.06■□□□□ 0.32
TPM2-208ENST00000607559 MBD5Q9P267 1494 aa17.05■□□□□ 0.32
TPM2-208ENST00000607559 SPAG9O60271 1321 aaKnown RBP17.04■□□□□ 0.32
TPM2-208ENST00000607559 MLECQ14165 292 aa17.04■□□□□ 0.32
TPM2-208ENST00000607559 RSPH4AQ5TD94 716 aa17.04■□□□□ 0.32
TPM2-208ENST00000607559 LMTK3Q96Q04 1460 aa17.04■□□□□ 0.32
TPM2-208ENST00000607559 TIAM1Q13009 1591 aa17.03■□□□□ 0.32
TPM2-208ENST00000607559 KIDINS220Q9ULH0 1771 aa17.03■□□□□ 0.32
TPM2-208ENST00000607559 ZNF644Q9H582 1327 aaPredicted RBP17.02■□□□□ 0.32
TPM2-208ENST00000607559 SYCP2Q9BX26 1530 aa17.02■□□□□ 0.32
TPM2-208ENST00000607559 ABCA6Q8N139 1617 aa17.02■□□□□ 0.31
TPM2-208ENST00000607559 NCOA2Q15596 1464 aa17.01■□□□□ 0.31
TPM2-208ENST00000607559 LRRC9Q6ZRR7 1453 aa17.01■□□□□ 0.31
TPM2-208ENST00000607559 MYT1LQ9UL68 1186 aa17.01■□□□□ 0.31
TPM2-208ENST00000607559 RTEL1-TNFRSF6BF6WH68 1400 aa17.01■□□□□ 0.31
TPM2-208ENST00000607559 FER1L4A9Z1Z3 1794 aa16.99■□□□□ 0.31
TPM2-208ENST00000607559 ATP7AQ04656 1500 aa16.96■□□□□ 0.31
TPM2-208ENST00000607559 KANK4Q5T7N3 995 aaPredicted RBP16.96■□□□□ 0.31
TPM2-208ENST00000607559 FBXO41Q8TF61 875 aa16.96■□□□□ 0.31
TPM2-208ENST00000607559 INO80Q9ULG1 1556 aaPredicted RBP16.96■□□□□ 0.31
TPM2-208ENST00000607559 SUPT6HQ7KZ85 1726 aaKnown RBP16.95■□□□□ 0.3
TPM2-208ENST00000607559 CNTLNQ9NXG0 1405 aa16.95■□□□□ 0.3
TPM2-208ENST00000607559 HSPA2P54652 639 aa16.94■□□□□ 0.3
TPM2-208ENST00000607559 SETD1BQ9UPS6 1966 aaKnown RBP16.94■□□□□ 0.3
TPM2-208ENST00000607559 PLXNC1O60486 1568 aa16.94■□□□□ 0.3
TPM2-208ENST00000607559 A2MP01023 1474 aa16.93■□□□□ 0.3
TPM2-208ENST00000607559 CEBPAP49715 358 aaPredicted RBP16.93■□□□□ 0.3
TPM2-208ENST00000607559 DHX29Q7Z478 1369 aaKnown RBP16.92■□□□□ 0.3
TPM2-208ENST00000607559 SLC4A1APQ9BWU0 796 aaKnown RBP16.92■□□□□ 0.3
TPM2-208ENST00000607559 MIA2Q96PC5 1412 aa16.92■□□□□ 0.3
TPM2-208ENST00000607559 ESF1Q9H501 851 aaKnown RBP16.9■□□□□ 0.3
TPM2-208ENST00000607559 CAMSAP2Q08AD1 1489 aa16.9■□□□□ 0.3
TPM2-208ENST00000607559 CCDC141Q6ZP82 1450 aa16.9■□□□□ 0.3
TPM2-208ENST00000607559 ARHGEF5Q12774 1597 aa16.89■□□□□ 0.3
TPM2-208ENST00000607559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.88■□□□□ 0.298e-7■■■■□ 25.3
TPM2-208ENST00000607559 ZMYM3Q14202 1370 aa16.88■□□□□ 0.29
TPM2-208ENST00000607559 NPATQ14207 1427 aa16.87■□□□□ 0.29
TPM2-208ENST00000607559 MYOM3Q5VTT5 1437 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms