RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 PLCG2P16885 1265 aa4.08□□□□□ -1.76
SNORA28-201ENST00000606769 CAMK2BQ13554 666 aa4.08□□□□□ -1.76
SNORA28-201ENST00000606769 LARP6Q9BRS8 491 aaKnown RBP4.08□□□□□ -1.76
SNORA28-201ENST00000606769 GPHNQ9NQX3 736 aaPredicted RBP4.08□□□□□ -1.76
SNORA28-201ENST00000606769 C2orf72A6NCS6 295 aa4.07□□□□□ -1.76
SNORA28-201ENST00000606769 DSG2Q14126 1118 aa4.07□□□□□ -1.76
SNORA28-201ENST00000606769 EMILIN3Q9NT22 766 aa4.07□□□□□ -1.76
SNORA28-201ENST00000606769 PDE4AP27815 886 aa4.06□□□□□ -1.76
SNORA28-201ENST00000606769 BCANQ96GW7 911 aa4.06□□□□□ -1.76
SNORA28-201ENST00000606769 SEC24BO95487 1268 aa4.05□□□□□ -1.76
SNORA28-201ENST00000606769 FOXK1P85037 733 aa4.05□□□□□ -1.76
SNORA28-201ENST00000606769 PPP1R15BQ5SWA1 713 aa4.05□□□□□ -1.76
SNORA28-201ENST00000606769 DDX27Q96GQ7 796 aaKnown RBP4.05□□□□□ -1.76
SNORA28-201ENST00000606769 ARIH1Q9Y4X5 557 aaPredicted RBP4.05□□□□□ -1.76
SNORA28-201ENST00000606769 E2F4Q16254 413 aa4.04□□□□□ -1.76
SNORA28-201ENST00000606769 L3MBTL3Q96JM7 780 aaPredicted RBP4.04□□□□□ -1.76
SNORA28-201ENST00000606769 PRKCSHP14314 528 aaPredicted RBP4.03□□□□□ -1.76
SNORA28-201ENST00000606769 PLPP6Q8IY26 295 aa4.03□□□□□ -1.76
SNORA28-201ENST00000606769 ARHGEF1Q92888 912 aaKnown RBP4.02□□□□□ -1.77
SNORA28-201ENST00000606769 WDR70Q9NW82 654 aa4.02□□□□□ -1.77
SNORA28-201ENST00000606769 SEMA3EO15041 775 aa4.01□□□□□ -1.77
SNORA28-201ENST00000606769 P3H3Q8IVL6 736 aa4.01□□□□□ -1.77
SNORA28-201ENST00000606769 TMC2Q8TDI7 906 aa4.01□□□□□ -1.77
SNORA28-201ENST00000606769 TESPA1A2RU30 521 aaPredicted RBP4□□□□□ -1.77
SNORA28-201ENST00000606769 DPYSL4O14531 572 aa4□□□□□ -1.77
SNORA28-201ENST00000606769 OXER1Q8TDS5 423 aa4□□□□□ -1.77
SNORA28-201ENST00000606769 KDM4FA0A1W2PPD8 638 aa3.99□□□□□ -1.77
SNORA28-201ENST00000606769 HOXB3P14651 431 aaPredicted RBP3.99□□□□□ -1.77
SNORA28-201ENST00000606769 MLLT3P42568 568 aaPredicted RBP3.99□□□□□ -1.77
SNORA28-201ENST00000606769 OTUD5Q96G74 571 aa3.99□□□□□ -1.77
SNORA28-201ENST00000606769 PRIM1P49642 420 aaKnown RBP3.98□□□□□ -1.77
SNORA28-201ENST00000606769 PDIA6Q15084 440 aa3.98□□□□□ -1.77
SNORA28-201ENST00000606769 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.98□□□□□ -1.77
SNORA28-201ENST00000606769 PTCD2Q8WV60 388 aaKnown RBP3.98□□□□□ -1.77
SNORA28-201ENST00000606769 SLC34A2O95436 690 aa3.97□□□□□ -1.77
SNORA28-201ENST00000606769 NBR1Q14596 966 aa3.97□□□□□ -1.77
SNORA28-201ENST00000606769 C3orf67Q6ZVT6 689 aa3.97□□□□□ -1.77
SNORA28-201ENST00000606769 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.97□□□□□ -1.77
SNORA28-201ENST00000606769 G3V3G9 751 aa3.96□□□□□ -1.78
SNORA28-201ENST00000606769 TPRNQ4KMQ1 711 aa3.96□□□□□ -1.78
SNORA28-201ENST00000606769 UPF1Q92900 1129 aaKnown RBP eCLIP3.96□□□□□ -1.78
SNORA28-201ENST00000606769 KHSRPQ92945 711 aaKnown RBP eCLIP3.95□□□□□ -1.78
SNORA28-201ENST00000606769 ANO8Q9HCE9 1232 aaPredicted RBP3.95□□□□□ -1.78
SNORA28-201ENST00000606769 GPR37O15354 613 aa3.94□□□□□ -1.78
SNORA28-201ENST00000606769 PTGER2P43116 358 aa3.94□□□□□ -1.78
SNORA28-201ENST00000606769 LMOD2Q6P5Q4 547 aa3.94□□□□□ -1.78
SNORA28-201ENST00000606769 SLAIN1Q8ND83 568 aa3.94□□□□□ -1.78
SNORA28-201ENST00000606769 PCDHGA4Q9Y5G9 962 aa3.94□□□□□ -1.78
SNORA28-201ENST00000606769 SPDYE16A6NNV3 312 aaPredicted RBP3.93□□□□□ -1.78
SNORA28-201ENST00000606769 EVI5O60447 810 aa3.93□□□□□ -1.78
SNORA28-201ENST00000606769 OSBPP22059 807 aa3.93□□□□□ -1.78
SNORA28-201ENST00000606769 RBM26Q5T8P6 1007 aaKnown RBP3.93□□□□□ -1.78
SNORA28-201ENST00000606769 LHX8Q68G74 356 aa3.93□□□□□ -1.78
SNORA28-201ENST00000606769 GPR153Q6NV75 609 aa3.93□□□□□ -1.78
SNORA28-201ENST00000606769 MAP3K9P80192 1104 aa3.92□□□□□ -1.78
SNORA28-201ENST00000606769 ARSIQ5FYB1 569 aa3.91□□□□□ -1.78
SNORA28-201ENST00000606769 LCE2DQ5TA82 110 aaPredicted RBP3.91□□□□□ -1.78
SNORA28-201ENST00000606769 ZC3H15Q8WU90 426 aaKnown RBP3.91□□□□□ -1.78
SNORA28-201ENST00000606769 DDX12PQ92771 950 aa3.91□□□□□ -1.78
SNORA28-201ENST00000606769 SCUBE2Q9NQ36 999 aa3.91□□□□□ -1.78
SNORA28-201ENST00000606769 MAMSTRQ6ZN01 415 aa3.9□□□□□ -1.79
SNORA28-201ENST00000606769 PCDHGA10Q9Y5H3 936 aa3.9□□□□□ -1.79
SNORA28-201ENST00000606769 GRXCR2A6NFK2 248 aa3.89□□□□□ -1.79
SNORA28-201ENST00000606769 ZMYND10O75800 440 aa3.89□□□□□ -1.79
SNORA28-201ENST00000606769 NUDT7P0C024 238 aa3.89□□□□□ -1.79
SNORA28-201ENST00000606769 NPDC1Q9NQX5 325 aaPredicted RBP3.89□□□□□ -1.79
SNORA28-201ENST00000606769 FECHP22830 423 aa3.88□□□□□ -1.79
SNORA28-201ENST00000606769 FOSBP53539 338 aa3.88□□□□□ -1.79
SNORA28-201ENST00000606769 CDHR5Q9HBB8 845 aa3.88□□□□□ -1.79
SNORA28-201ENST00000606769 POTEB3A0JP26 581 aa3.87□□□□□ -1.79
SNORA28-201ENST00000606769 TBC1D12O60347 775 aa3.87□□□□□ -1.79
SNORA28-201ENST00000606769 HOXB1P14653 301 aaPredicted RBP3.87□□□□□ -1.79
SNORA28-201ENST00000606769 DOK7Q18PE1 504 aa3.87□□□□□ -1.79
SNORA28-201ENST00000606769 POTEBQ6S5H4 581 aa3.87□□□□□ -1.79
SNORA28-201ENST00000606769 ZSWIM6Q9HCJ5 1215 aa3.87□□□□□ -1.79
SNORA28-201ENST00000606769 PLSCR2Q9NRY7 297 aa3.87□□□□□ -1.79
SNORA28-201ENST00000606769 LHX6Q9UPM6 363 aa3.87□□□□□ -1.79
SNORA28-201ENST00000606769 PHF14O94880 888 aa3.86□□□□□ -1.79
SNORA28-201ENST00000606769 EN1Q05925 392 aaPredicted RBP3.86□□□□□ -1.79
SNORA28-201ENST00000606769 TSR1Q2NL82 804 aaKnown RBP3.86□□□□□ -1.79
SNORA28-201ENST00000606769 POTEEQ6S8J3 1075 aa3.86□□□□□ -1.79
SNORA28-201ENST00000606769 BARGINQ6ZT62 677 aa3.86□□□□□ -1.79
SNORA28-201ENST00000606769 JPH4Q96JJ6 628 aa3.86□□□□□ -1.79
SNORA28-201ENST00000606769 ADAM33Q9BZ11 813 aa3.86□□□□□ -1.79
SNORA28-201ENST00000606769 ST18O60284 1047 aa3.85□□□□□ -1.79
SNORA28-201ENST00000606769 PTGDRQ13258 359 aa3.85□□□□□ -1.79
SNORA28-201ENST00000606769 SMYD5Q6GMV2 418 aa3.85□□□□□ -1.79
SNORA28-201ENST00000606769 GPIHBP1Q8IV16 184 aa3.85□□□□□ -1.79
SNORA28-201ENST00000606769 SLC24A3Q9HC58 644 aa3.85□□□□□ -1.79
SNORA28-201ENST00000606769 ZNF316A6NFI3 1004 aaPredicted RBP3.84□□□□□ -1.79
SNORA28-201ENST00000606769 C3orf80F5H4A9 247 aa3.84□□□□□ -1.79
SNORA28-201ENST00000606769 TYW1BQ6NUM6 668 aa3.84□□□□□ -1.79
SNORA28-201ENST00000606769 RBM33Q96EV2 1170 aaKnown RBP3.84□□□□□ -1.79
SNORA28-201ENST00000606769 EPAS1Q99814 870 aa3.84□□□□□ -1.79
SNORA28-201ENST00000606769 COL9A1P20849 921 aa3.83□□□□□ -1.8
SNORA28-201ENST00000606769 ZNF710Q8N1W2 664 aa3.83□□□□□ -1.8
SNORA28-201ENST00000606769 ZNF454Q8N9F8 522 aa3.83□□□□□ -1.8
SNORA28-201ENST00000606769 TTC13Q8NBP0 860 aa3.83□□□□□ -1.8
SNORA28-201ENST00000606769 ZDHHC16Q969W1 377 aa3.83□□□□□ -1.8
SNORA28-201ENST00000606769 FAM198AQ9UFP1 575 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms