RNA–Protein interactions for RNA: ENST00000606055.1

LINC00458-204, long intergenic non-protein coding RNA 458, humanhuman

TSL 3

Gene LINC00458, Length 425 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-204ENST00000606055 FANCAO15360 1455 aa11.14□□□□□ -0.63
LINC00458-204ENST00000606055 MIA2Q96PC5 1412 aa11.14□□□□□ -0.63
LINC00458-204ENST00000606055 RICTORQ6R327 1708 aa11.14□□□□□ -0.63
LINC00458-204ENST00000606055 ARHGAP5Q13017 1502 aa11.14□□□□□ -0.63
LINC00458-204ENST00000606055 NCOA2Q15596 1464 aa11.13□□□□□ -0.63
LINC00458-204ENST00000606055 PLCH2O75038 1416 aa11.13□□□□□ -0.63
LINC00458-204ENST00000606055 KANK4Q5T7N3 995 aaPredicted RBP11.13□□□□□ -0.63
LINC00458-204ENST00000606055 COL17A1Q9UMD9 1497 aaPredicted RBP11.12□□□□□ -0.63
LINC00458-204ENST00000606055 AKNAQ7Z591 1439 aa11.12□□□□□ -0.63
LINC00458-204ENST00000606055 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.12□□□□□ -0.63
LINC00458-204ENST00000606055 CCNB3Q8WWL7 1395 aa11.11□□□□□ -0.63
LINC00458-204ENST00000606055 MYOM3Q5VTT5 1437 aa11.1□□□□□ -0.63
LINC00458-204ENST00000606055 GPATCH8Q9UKJ3 1502 aaKnown RBP11.1□□□□□ -0.63
LINC00458-204ENST00000606055 DENND4BO75064 1496 aaPredicted RBP11.1□□□□□ -0.63
LINC00458-204ENST00000606055 FRMPD1Q5SYB0 1578 aa11.1□□□□□ -0.63
LINC00458-204ENST00000606055 ADGRL1O94910 1474 aa11.09□□□□□ -0.63
LINC00458-204ENST00000606055 PLEKHH2Q8IVE3 1493 aa11.09□□□□□ -0.63
LINC00458-204ENST00000606055 EFCAB2Q5VUJ9 269 aa11.09□□□□□ -0.63
LINC00458-204ENST00000606055 KIAA1107Q9UPP5 1409 aa11.09□□□□□ -0.63
LINC00458-204ENST00000606055 RSPH4AQ5TD94 716 aa11.07□□□□□ -0.64
LINC00458-204ENST00000606055 FGD6Q6ZV73 1430 aa11.06□□□□□ -0.64
LINC00458-204ENST00000606055 SCAPERQ9BY12 1400 aa11.06□□□□□ -0.64
LINC00458-204ENST00000606055 RRBP1Q9P2E9 1410 aaKnown RBP11.06□□□□□ -0.64
LINC00458-204ENST00000606055 TCOF1Q13428 1488 aaKnown RBP11.06□□□□□ -0.64
LINC00458-204ENST00000606055 ABCC1P33527 1531 aa11.05□□□□□ -0.64
LINC00458-204ENST00000606055 KDM4FA0A1W2PPD8 638 aa11.05□□□□□ -0.64
LINC00458-204ENST00000606055 RAPGEF3O95398 923 aa11.05□□□□□ -0.64
LINC00458-204ENST00000606055 CFDP1Q9UEE9 299 aaPredicted RBP11.05□□□□□ -0.64
LINC00458-204ENST00000606055 ZMYM4Q5VZL5 1548 aa11.04□□□□□ -0.64
LINC00458-204ENST00000606055 ARHGEF40Q8TER5 1519 aa11.04□□□□□ -0.64
LINC00458-204ENST00000606055 SAMD9LQ8IVG5 1584 aa11.04□□□□□ -0.64
LINC00458-204ENST00000606055 POGZQ7Z3K3 1410 aa11.04□□□□□ -0.64
LINC00458-204ENST00000606055 ZNF518AQ6AHZ1 1483 aa11.03□□□□□ -0.64
LINC00458-204ENST00000606055 ZFYVE16Q7Z3T8 1539 aa11.03□□□□□ -0.64
LINC00458-204ENST00000606055 HECW2Q9P2P5 1572 aa11.03□□□□□ -0.64
LINC00458-204ENST00000606055 ZNF777Q9ULD5 760 aaPredicted RBP11.02□□□□□ -0.65
LINC00458-204ENST00000606055 KDM5CP41229 1560 aa11.02□□□□□ -0.65
LINC00458-204ENST00000606055 MAGI2Q86UL8 1455 aa11.01□□□□□ -0.65
LINC00458-204ENST00000606055 SYCP2Q9BX26 1530 aa11.01□□□□□ -0.65
LINC00458-204ENST00000606055 ARHGEF5Q12774 1597 aa11□□□□□ -0.65
LINC00458-204ENST00000606055 MBD5Q9P267 1494 aa11□□□□□ -0.65
LINC00458-204ENST00000606055 MYT1LQ9UL68 1186 aa10.99□□□□□ -0.65
LINC00458-204ENST00000606055 CAMSAP2Q08AD1 1489 aa10.99□□□□□ -0.65
LINC00458-204ENST00000606055 PTPN23Q9H3S7 1636 aa10.98□□□□□ -0.65
LINC00458-204ENST00000606055 BCORL1Q5H9F3 1711 aa10.98□□□□□ -0.65
LINC00458-204ENST00000606055 KIDINS220Q9ULH0 1771 aa10.98□□□□□ -0.65
LINC00458-204ENST00000606055 SHANK2Q9UPX8 1470 aa10.98□□□□□ -0.65
LINC00458-204ENST00000606055 ARHGEF12Q9NZN5 1544 aa10.98□□□□□ -0.65
LINC00458-204ENST00000606055 RTEL1-TNFRSF6BF6WH68 1400 aa10.97□□□□□ -0.65
LINC00458-204ENST00000606055 ABCA6Q8N139 1617 aa10.97□□□□□ -0.65
LINC00458-204ENST00000606055 DIP2CQ9Y2E4 1556 aa10.96□□□□□ -0.65
LINC00458-204ENST00000606055 CCDC141Q6ZP82 1450 aa10.96□□□□□ -0.65
LINC00458-204ENST00000606055 TRAPPC8Q9Y2L5 1435 aa10.96□□□□□ -0.65
LINC00458-204ENST00000606055 AFAP1Q8N556 730 aa10.96□□□□□ -0.65
LINC00458-204ENST00000606055 FER1L4A9Z1Z3 1794 aa10.95□□□□□ -0.66
LINC00458-204ENST00000606055 ADGBQ8N7X0 1667 aa10.95□□□□□ -0.66
LINC00458-204ENST00000606055 MLH3Q9UHC1 1453 aa10.95□□□□□ -0.66
LINC00458-204ENST00000606055 YEATS2Q9ULM3 1422 aa10.95□□□□□ -0.66
LINC00458-204ENST00000606055 ARID4BQ4LE39 1312 aaPredicted RBP10.95□□□□□ -0.66
LINC00458-204ENST00000606055 SIGLEC1Q9BZZ2 1709 aa10.95□□□□□ -0.66
LINC00458-204ENST00000606055 INO80Q9ULG1 1556 aaPredicted RBP10.94□□□□□ -0.66
LINC00458-204ENST00000606055 MAST1Q9Y2H9 1570 aa10.94□□□□□ -0.66
LINC00458-204ENST00000606055 ATP7AQ04656 1500 aa10.94□□□□□ -0.66
LINC00458-204ENST00000606055 ATP10AO60312 1499 aa10.94□□□□□ -0.66
LINC00458-204ENST00000606055 C9orf84Q5VXU9 1444 aa10.94□□□□□ -0.66
LINC00458-204ENST00000606055 ROCK1Q13464 1354 aa10.94□□□□□ -0.66
LINC00458-204ENST00000606055 ACIN1Q9UKV3 1341 aaKnown RBP10.94□□□□□ -0.66
LINC00458-204ENST00000606055 HNRNPMP52272 730 aaKnown RBP eCLIP10.94□□□□□ -0.66
LINC00458-204ENST00000606055 ADAMTSL3P82987 1691 aa10.94□□□□□ -0.66
LINC00458-204ENST00000606055 DNMT1P26358 1616 aaKnown RBP10.94□□□□□ -0.66
LINC00458-204ENST00000606055 REREQ9P2R6 1566 aa10.93□□□□□ -0.66
LINC00458-204ENST00000606055 ADGRL2O95490 1459 aa10.93□□□□□ -0.66
LINC00458-204ENST00000606055 ABCC5O15440 1437 aa10.92□□□□□ -0.66
LINC00458-204ENST00000606055 DAPK1P53355 1430 aa10.92□□□□□ -0.66
LINC00458-204ENST00000606055 CROCC2H7BZ55 1655 aa10.92□□□□□ -0.66
LINC00458-204ENST00000606055 RIMS1Q86UR5 1692 aaKnown RBP10.92□□□□□ -0.66
LINC00458-204ENST00000606055 SPAG9O60271 1321 aaKnown RBP10.92□□□□□ -0.66
LINC00458-204ENST00000606055 ZNF644Q9H582 1327 aaPredicted RBP10.92□□□□□ -0.66
LINC00458-204ENST00000606055 TSPY4P0CV99 314 aa10.92□□□□□ -0.66
LINC00458-204ENST00000606055 TSPY10P0CW01 314 aa10.92□□□□□ -0.66
LINC00458-204ENST00000606055 MADDQ8WXG6 1647 aa10.91□□□□□ -0.66
LINC00458-204ENST00000606055 TRIM26Q12899 539 aaPredicted RBP10.9□□□□□ -0.66
LINC00458-204ENST00000606055 PPARGC1BQ86YN6 1023 aaKnown RBP10.89□□□□□ -0.67
LINC00458-204ENST00000606055 PLXNC1O60486 1568 aa10.89□□□□□ -0.67
LINC00458-204ENST00000606055 FAM50AQ14320 339 aaKnown RBP10.88□□□□□ -0.67
LINC00458-204ENST00000606055 NCOA1Q15788 1441 aa10.88□□□□□ -0.67
LINC00458-204ENST00000606055 AGLP35573 1532 aa10.88□□□□□ -0.67
LINC00458-204ENST00000606055 ANKRD30AQ9BXX3 1397 aa10.88□□□□□ -0.67
LINC00458-204ENST00000606055 HRCP23327 699 aa10.87□□□□□ -0.67
LINC00458-204ENST00000606055 MLECQ14165 292 aa10.87□□□□□ -0.67
LINC00458-204ENST00000606055 FBXO41Q8TF61 875 aa10.87□□□□□ -0.67
LINC00458-204ENST00000606055 SETD1BQ9UPS6 1966 aaKnown RBP10.86□□□□□ -0.67
LINC00458-204ENST00000606055 A2MP01023 1474 aa10.86□□□□□ -0.67
LINC00458-204ENST00000606055 HFM1A2PYH4 1435 aa10.85□□□□□ -0.67
LINC00458-204ENST00000606055 PTPRKQ15262 1439 aa10.84□□□□□ -0.67
LINC00458-204ENST00000606055 DUOX2Q9NRD8 1548 aa10.84□□□□□ -0.67
LINC00458-204ENST00000606055 ERBINQ96RT1 1412 aa10.84□□□□□ -0.67
LINC00458-204ENST00000606055 MROH2AA6NES4 1674 aa10.83□□□□□ -0.68
LINC00458-204ENST00000606055 PTPRMP28827 1452 aa10.83□□□□□ -0.68
LINC00458-204ENST00000606055 DHX29Q7Z478 1369 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms