RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 NCLP19338 710 aaKnown RBP9.91□□□□□ -0.82
TUBE1-207ENST00000604689 ZFP91Q96JP5 570 aaPredicted RBP9.91□□□□□ -0.82
TUBE1-207ENST00000604689 TMCO4Q5TGY1 634 aa9.9□□□□□ -0.82
TUBE1-207ENST00000604689 RSPH4AQ5TD94 716 aa9.9□□□□□ -0.82
TUBE1-207ENST00000604689 BCCIPQ9P287 314 aaKnown RBP eCLIP9.9□□□□□ -0.82
TUBE1-207ENST00000604689 PLCD3Q8N3E9 789 aa9.89□□□□□ -0.83
TUBE1-207ENST00000604689 NCAPD3P42695 1498 aa9.88□□□□□ -0.83
TUBE1-207ENST00000604689 HS6ST3Q8IZP7 471 aa9.88□□□□□ -0.83
TUBE1-207ENST00000604689 HMGB1P09429 215 aaKnown RBP9.87□□□□□ -0.83
TUBE1-207ENST00000604689 ARID4BQ4LE39 1312 aaPredicted RBP9.87□□□□□ -0.83
TUBE1-207ENST00000604689 PATL2C9JE40 543 aaKnown RBP9.86□□□□□ -0.83
TUBE1-207ENST00000604689 SEMA3EO15041 775 aa9.86□□□□□ -0.83
TUBE1-207ENST00000604689 CC2D2AQ9P2K1 1620 aa9.85□□□□□ -0.83
TUBE1-207ENST00000604689 PUS7Q96PZ0 661 aaKnown RBP9.85□□□□□ -0.83
TUBE1-207ENST00000604689 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.84□□□□□ -0.83
TUBE1-207ENST00000604689 ZNF219Q9P2Y4 722 aaPredicted RBP9.82□□□□□ -0.84
TUBE1-207ENST00000604689 LAMC3Q9Y6N6 1575 aa9.82□□□□□ -0.84
TUBE1-207ENST00000604689 P3H3Q8IVL6 736 aa9.81□□□□□ -0.84
TUBE1-207ENST00000604689 SUPT16HQ9Y5B9 1047 aaKnown RBP9.81□□□□□ -0.84
TUBE1-207ENST00000604689 ZNF316A6NFI3 1004 aaPredicted RBP9.81□□□□□ -0.84
TUBE1-207ENST00000604689 STK25O00506 426 aa9.8□□□□□ -0.84
TUBE1-207ENST00000604689 PPM1GO15355 546 aaPredicted RBP9.8□□□□□ -0.84
TUBE1-207ENST00000604689 TMED8Q6PL24 325 aaPredicted RBP9.8□□□□□ -0.84
TUBE1-207ENST00000604689 ZNF777Q9ULD5 760 aaPredicted RBP9.8□□□□□ -0.84
TUBE1-207ENST00000604689 CADPS2Q86UW7 1296 aa9.79□□□□□ -0.84
TUBE1-207ENST00000604689 FAM177A1Q8N128 213 aaPredicted RBP9.79□□□□□ -0.84
TUBE1-207ENST00000604689 CWC22Q9HCG8 908 aaKnown RBP9.79□□□□□ -0.84
TUBE1-207ENST00000604689 SECISBP2LQ93073 1101 aaKnown RBP9.78□□□□□ -0.84
TUBE1-207ENST00000604689 PSMD1Q99460 953 aa9.78□□□□□ -0.84
TUBE1-207ENST00000604689 FBXW7Q969H0 707 aa9.77□□□□□ -0.85
TUBE1-207ENST00000604689 CANXP27824 592 aaKnown RBP9.77□□□□□ -0.85
TUBE1-207ENST00000604689 ZNF692Q9BU19 519 aaPredicted RBP9.76□□□□□ -0.85
TUBE1-207ENST00000604689 KDM4CQ9H3R0 1056 aa9.76□□□□□ -0.85
TUBE1-207ENST00000604689 BIVM-ERCC5R4GMW8 1640 aa9.76□□□□□ -0.85
TUBE1-207ENST00000604689 RETREG2Q8NC44 543 aa9.76□□□□□ -0.85
TUBE1-207ENST00000604689 TOP2AP11388 1531 aaKnown RBP9.76□□□□□ -0.85
TUBE1-207ENST00000604689 PTMSP20962 102 aa9.75□□□□□ -0.85
TUBE1-207ENST00000604689 BAZ1BQ9UIG0 1483 aaKnown RBP9.75□□□□□ -0.85
TUBE1-207ENST00000604689 E9PSI1 815 aa9.75□□□□□ -0.85
TUBE1-207ENST00000604689 OS9Q13438 667 aaPredicted RBP9.75□□□□□ -0.85
TUBE1-207ENST00000604689 POLA2Q14181 598 aa9.75□□□□□ -0.85
TUBE1-207ENST00000604689 CNGB1Q14028 1251 aaPredicted RBP9.75□□□□□ -0.85
TUBE1-207ENST00000604689 IRF5Q13568 498 aa9.73□□□□□ -0.85
TUBE1-207ENST00000604689 FAM117AQ9C073 453 aa9.73□□□□□ -0.85
TUBE1-207ENST00000604689 PLCD4Q9BRC7 762 aa9.71□□□□□ -0.85
TUBE1-207ENST00000604689 HOXD11P31277 338 aaPredicted RBP9.71□□□□□ -0.86
TUBE1-207ENST00000604689 TICAM2Q86XR7 235 aa9.7□□□□□ -0.86
TUBE1-207ENST00000604689 WDR62O43379 1518 aa9.7□□□□□ -0.86
TUBE1-207ENST00000604689 DCAF8L1A6NGE4 600 aa9.69□□□□□ -0.86
TUBE1-207ENST00000604689 ZMYND10O75800 440 aa9.68□□□□□ -0.86
TUBE1-207ENST00000604689 ITGAEP38570 1179 aa9.67□□□□□ -0.86
TUBE1-207ENST00000604689 FAM9BQ8IZU0 186 aa9.67□□□□□ -0.86
TUBE1-207ENST00000604689 CARNS1A5YM72 827 aa9.67□□□□□ -0.86
TUBE1-207ENST00000604689 HNRNPUL2Q1KMD3 747 aaKnown RBP9.66□□□□□ -0.86
TUBE1-207ENST00000604689 IPO4Q8TEX9 1081 aaKnown RBP9.66□□□□□ -0.86
TUBE1-207ENST00000604689 CLSTN1O94985 981 aa9.65□□□□□ -0.86
TUBE1-207ENST00000604689 KCNH8Q96L42 1107 aa9.65□□□□□ -0.86
TUBE1-207ENST00000604689 APPP05067 770 aa9.65□□□□□ -0.86
TUBE1-207ENST00000604689 CERS3Q8IU89 383 aa9.64□□□□□ -0.87
TUBE1-207ENST00000604689 FTSJ3Q8IY81 847 aaKnown RBP9.64□□□□□ -0.87
TUBE1-207ENST00000604689 KRI1Q8N9T8 703 aaKnown RBP9.63□□□□□ -0.87
TUBE1-207ENST00000604689 TRAK2O60296 914 aa9.62□□□□□ -0.87
TUBE1-207ENST00000604689 FAM193AP78312 1265 aa9.62□□□□□ -0.87
TUBE1-207ENST00000604689 FAM43BQ6ZT52 329 aaPredicted RBP9.62□□□□□ -0.87
TUBE1-207ENST00000604689 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.61□□□□□ -0.87
TUBE1-207ENST00000604689 TRAIPQ9BWF2 469 aa9.61□□□□□ -0.87
TUBE1-207ENST00000604689 STK24Q9Y6E0 443 aa9.61□□□□□ -0.87
TUBE1-207ENST00000604689 KIF21AQ7Z4S6 1674 aa9.61□□□□□ -0.87
TUBE1-207ENST00000604689 FAM50AQ14320 339 aaKnown RBP9.61□□□□□ -0.87
TUBE1-207ENST00000604689 SOX12O15370 315 aa9.6□□□□□ -0.87
TUBE1-207ENST00000604689 TEX2Q8IWB9 1127 aa9.6□□□□□ -0.87
TUBE1-207ENST00000604689 U3KPZ7 1027 aaPredicted RBP9.6□□□□□ -0.87
TUBE1-207ENST00000604689 POM121Q96HA1 1249 aa9.59□□□□□ -0.87
TUBE1-207ENST00000604689 RBM19Q9Y4C8 960 aaKnown RBP9.59□□□□□ -0.87
TUBE1-207ENST00000604689 MSH5O43196 834 aa9.59□□□□□ -0.87
TUBE1-207ENST00000604689 HSP90AA2PQ14568 343 aaPredicted RBP9.58□□□□□ -0.88
TUBE1-207ENST00000604689 PTMAP06454 111 aaKnown RBP9.58□□□□□ -0.88
TUBE1-207ENST00000604689 KCNG1Q9UIX4 513 aa9.57□□□□□ -0.88
TUBE1-207ENST00000604689 ATAD2BQ9ULI0 1458 aa9.57□□□□□ -0.88
TUBE1-207ENST00000604689 RBM26Q5T8P6 1007 aaKnown RBP9.56□□□□□ -0.88
TUBE1-207ENST00000604689 TARBP1Q13395 1621 aaKnown RBP9.56□□□□□ -0.88
TUBE1-207ENST00000604689 KDM4AO75164 1064 aa9.55□□□□□ -0.88
TUBE1-207ENST00000604689 PDE4DQ08499 809 aa9.55□□□□□ -0.88
TUBE1-207ENST00000604689 CCDC97Q96F63 343 aaPredicted RBP9.55□□□□□ -0.88
TUBE1-207ENST00000604689 SMARCA5O60264 1052 aaPredicted RBP9.55□□□□□ -0.88
TUBE1-207ENST00000604689 PRDM16Q9HAZ2 1276 aa9.54□□□□□ -0.88
TUBE1-207ENST00000604689 SHROOM2Q13796 1616 aa9.54□□□□□ -0.88
TUBE1-207ENST00000604689 CUX2O14529 1486 aa9.54□□□□□ -0.88
TUBE1-207ENST00000604689 TESPA1A2RU30 521 aaPredicted RBP9.52□□□□□ -0.88
TUBE1-207ENST00000604689 BARGINQ6ZT62 677 aa9.52□□□□□ -0.88
TUBE1-207ENST00000604689 PLEKHG3A1L390 1219 aa9.52□□□□□ -0.89
TUBE1-207ENST00000604689 AK7Q96M32 723 aa9.52□□□□□ -0.89
TUBE1-207ENST00000604689 ABCA5Q8WWZ7 1642 aa9.51□□□□□ -0.89
TUBE1-207ENST00000604689 RGS3P49796 1198 aa9.51□□□□□ -0.89
TUBE1-207ENST00000604689 ONECUT3O60422 494 aaPredicted RBP9.5□□□□□ -0.89
TUBE1-207ENST00000604689 GTF2E1P29083 439 aaPredicted RBP9.5□□□□□ -0.89
TUBE1-207ENST00000604689 PPP1R1BQ9UD71 204 aaPredicted RBP9.5□□□□□ -0.89
TUBE1-207ENST00000604689 UNCXA6NJT0 531 aa9.5□□□□□ -0.89
TUBE1-207ENST00000604689 VGLL3A8MV65 326 aa9.5□□□□□ -0.89
TUBE1-207ENST00000604689 RIOK3O14730 519 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms