RNA–Protein interactions for RNA: ENST00000604589.1

RPS28P1-201, Transcript of ribosomal protein S28 pseudogene 1, humanhuman

BASIC

Gene RPS28P1, Length 187 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P1-201ENST00000604589 SCAPERQ9BY12 1400 aa12.13□□□□□ -0.47
RPS28P1-201ENST00000604589 LRRIQ1Q96JM4 1722 aa12.12□□□□□ -0.47
RPS28P1-201ENST00000604589 ARHGAP5Q13017 1502 aa12.11□□□□□ -0.47
RPS28P1-201ENST00000604589 ZFYVE16Q7Z3T8 1539 aa12.11□□□□□ -0.47
RPS28P1-201ENST00000604589 ZNF518AQ6AHZ1 1483 aa12.11□□□□□ -0.47
RPS28P1-201ENST00000604589 PREX2Q70Z35 1606 aa12.09□□□□□ -0.47
RPS28P1-201ENST00000604589 KDM5CP41229 1560 aa12.09□□□□□ -0.47
RPS28P1-201ENST00000604589 ADAMTSL3P82987 1691 aa12.06□□□□□ -0.48
RPS28P1-201ENST00000604589 ABCC1P33527 1531 aa12.06□□□□□ -0.48
RPS28P1-201ENST00000604589 MTUS2Q5JR59 1369 aa12.06□□□□□ -0.48
RPS28P1-201ENST00000604589 YEATS2Q9ULM3 1422 aa12.06□□□□□ -0.48
RPS28P1-201ENST00000604589 ATP10AO60312 1499 aa12.06□□□□□ -0.48
RPS28P1-201ENST00000604589 MLH3Q9UHC1 1453 aa12.06□□□□□ -0.48
RPS28P1-201ENST00000604589 EHBP1L1Q8N3D4 1523 aa12.06□□□□□ -0.48
RPS28P1-201ENST00000604589 C9orf84Q5VXU9 1444 aa12.05□□□□□ -0.48
RPS28P1-201ENST00000604589 PLEKHH2Q8IVE3 1493 aa12.05□□□□□ -0.48
RPS28P1-201ENST00000604589 BCORL1Q5H9F3 1711 aa12.05□□□□□ -0.48
RPS28P1-201ENST00000604589 GPATCH8Q9UKJ3 1502 aaKnown RBP12.05□□□□□ -0.48
RPS28P1-201ENST00000604589 ARID4BQ4LE39 1312 aaPredicted RBP12.05□□□□□ -0.48
RPS28P1-201ENST00000604589 KIAA1107Q9UPP5 1409 aa12.04□□□□□ -0.48
RPS28P1-201ENST00000604589 VPS8Q8N3P4 1428 aa12.03□□□□□ -0.48
RPS28P1-201ENST00000604589 CDC42BPBQ9Y5S2 1711 aa12.03□□□□□ -0.48
RPS28P1-201ENST00000604589 PTPRMP28827 1452 aa12.03□□□□□ -0.48
RPS28P1-201ENST00000604589 HECW2Q9P2P5 1572 aa12.03□□□□□ -0.48
RPS28P1-201ENST00000604589 REREQ9P2R6 1566 aa12.03□□□□□ -0.48
RPS28P1-201ENST00000604589 CCNB3Q8WWL7 1395 aa12.03□□□□□ -0.48
RPS28P1-201ENST00000604589 ARHGEF12Q9NZN5 1544 aa12.01□□□□□ -0.49
RPS28P1-201ENST00000604589 CDC42BPAQ5VT25 1732 aa12.01□□□□□ -0.49
RPS28P1-201ENST00000604589 AFAP1Q8N556 730 aa12.01□□□□□ -0.49
RPS28P1-201ENST00000604589 TRAPPC8Q9Y2L5 1435 aa12.01□□□□□ -0.49
RPS28P1-201ENST00000604589 CFDP1Q9UEE9 299 aaPredicted RBP12□□□□□ -0.49
RPS28P1-201ENST00000604589 MAP3K1Q13233 1512 aa12□□□□□ -0.49
RPS28P1-201ENST00000604589 ITSN2Q9NZM3 1697 aa12□□□□□ -0.49
RPS28P1-201ENST00000604589 AGLP35573 1532 aa11.99□□□□□ -0.49
RPS28P1-201ENST00000604589 SAMD9LQ8IVG5 1584 aa11.99□□□□□ -0.49
RPS28P1-201ENST00000604589 DIP2CQ9Y2E4 1556 aa11.99□□□□□ -0.49
RPS28P1-201ENST00000604589 MADDQ8WXG6 1647 aa11.99□□□□□ -0.49
RPS28P1-201ENST00000604589 TIAM1Q13009 1591 aa11.98□□□□□ -0.49
RPS28P1-201ENST00000604589 LOC105371045A0A1W2PR82 267 aa11.98□□□□□ -0.49
RPS28P1-201ENST00000604589 SYCP2Q9BX26 1530 aa11.97□□□□□ -0.49
RPS28P1-201ENST00000604589 NCOA2Q15596 1464 aa11.95□□□□□ -0.5
RPS28P1-201ENST00000604589 SPAG9O60271 1321 aaKnown RBP11.95□□□□□ -0.5
RPS28P1-201ENST00000604589 ZNF777Q9ULD5 760 aaPredicted RBP11.95□□□□□ -0.5
RPS28P1-201ENST00000604589 ABCA6Q8N139 1617 aa11.95□□□□□ -0.5
RPS28P1-201ENST00000604589 LRRC9Q6ZRR7 1453 aa11.95□□□□□ -0.5
RPS28P1-201ENST00000604589 SUPT6HQ7KZ85 1726 aaKnown RBP11.94□□□□□ -0.5
RPS28P1-201ENST00000604589 SIGLEC1Q9BZZ2 1709 aa11.94□□□□□ -0.5
RPS28P1-201ENST00000604589 MYT1LQ9UL68 1186 aa11.94□□□□□ -0.5
RPS28P1-201ENST00000604589 RSPH4AQ5TD94 716 aa11.93□□□□□ -0.5
RPS28P1-201ENST00000604589 MBD5Q9P267 1494 aa11.93□□□□□ -0.5
RPS28P1-201ENST00000604589 RIMS1Q86UR5 1692 aaKnown RBP11.93□□□□□ -0.5
RPS28P1-201ENST00000604589 RTEL1-TNFRSF6BF6WH68 1400 aa11.93□□□□□ -0.5
RPS28P1-201ENST00000604589 INO80Q9ULG1 1556 aaPredicted RBP11.92□□□□□ -0.5
RPS28P1-201ENST00000604589 KIDINS220Q9ULH0 1771 aa11.92□□□□□ -0.5
RPS28P1-201ENST00000604589 ATP7AQ04656 1500 aa11.92□□□□□ -0.5
RPS28P1-201ENST00000604589 HNRNPMP52272 730 aaKnown RBP eCLIP11.92□□□□□ -0.5
RPS28P1-201ENST00000604589 CNTLNQ9NXG0 1405 aa11.92□□□□□ -0.5
RPS28P1-201ENST00000604589 FER1L4A9Z1Z3 1794 aa11.91□□□□□ -0.5
RPS28P1-201ENST00000604589 PLXNC1O60486 1568 aa11.9□□□□□ -0.5
RPS28P1-201ENST00000604589 MLECQ14165 292 aa11.9□□□□□ -0.5
RPS28P1-201ENST00000604589 CCDC141Q6ZP82 1450 aa11.89□□□□□ -0.51
RPS28P1-201ENST00000604589 LMTK3Q96Q04 1460 aa11.89□□□□□ -0.51
RPS28P1-201ENST00000604589 MIA2Q96PC5 1412 aa11.89□□□□□ -0.51
RPS28P1-201ENST00000604589 A2MP01023 1474 aa11.89□□□□□ -0.51
RPS28P1-201ENST00000604589 CAMSAP2Q08AD1 1489 aa11.89□□□□□ -0.51
RPS28P1-201ENST00000604589 ARHGEF5Q12774 1597 aa11.88□□□□□ -0.51
RPS28P1-201ENST00000604589 ZNF644Q9H582 1327 aaPredicted RBP11.87□□□□□ -0.51
RPS28P1-201ENST00000604589 PPP6R1Q9UPN7 881 aa11.87□□□□□ -0.51
RPS28P1-201ENST00000604589 MYOM3Q5VTT5 1437 aa11.86□□□□□ -0.51
RPS28P1-201ENST00000604589 APLP2Q06481 763 aa11.86□□□□□ -0.51
RPS28P1-201ENST00000604589 ESF1Q9H501 851 aaKnown RBP11.86□□□□□ -0.51
RPS28P1-201ENST00000604589 FAM135AQ9P2D6 1515 aa11.85□□□□□ -0.51
RPS28P1-201ENST00000604589 ADGBQ8N7X0 1667 aa11.84□□□□□ -0.51
RPS28P1-201ENST00000604589 DHX29Q7Z478 1369 aaKnown RBP11.84□□□□□ -0.51
RPS28P1-201ENST00000604589 KANK4Q5T7N3 995 aaPredicted RBP11.83□□□□□ -0.52
RPS28P1-201ENST00000604589 NPATQ14207 1427 aa11.83□□□□□ -0.52
RPS28P1-201ENST00000604589 MROH2AA6NES4 1674 aa11.82□□□□□ -0.52
RPS28P1-201ENST00000604589 TSPY4P0CV99 314 aa11.82□□□□□ -0.52
RPS28P1-201ENST00000604589 TSPY10P0CW01 314 aa11.82□□□□□ -0.52
RPS28P1-201ENST00000604589 UHRF1BP1Q6BDS2 1440 aa11.82□□□□□ -0.52
RPS28P1-201ENST00000604589 PREX1Q8TCU6 1659 aa11.81□□□□□ -0.52
RPS28P1-201ENST00000604589 MAST1Q9Y2H9 1570 aa11.81□□□□□ -0.52
RPS28P1-201ENST00000604589 ZMYM3Q14202 1370 aa11.79□□□□□ -0.52
RPS28P1-201ENST00000604589 SHANK2Q9UPX8 1470 aa11.79□□□□□ -0.52
RPS28P1-201ENST00000604589 CEBPAP49715 358 aaPredicted RBP11.79□□□□□ -0.52
RPS28P1-201ENST00000604589 SETD1BQ9UPS6 1966 aaKnown RBP11.79□□□□□ -0.52
RPS28P1-201ENST00000604589 C3P01024 1663 aa11.78□□□□□ -0.52
RPS28P1-201ENST00000604589 TCOF1Q13428 1488 aaKnown RBP11.77□□□□□ -0.52
RPS28P1-201ENST00000604589 PLPPR3Q6T4P5 718 aa11.77□□□□□ -0.53
RPS28P1-201ENST00000604589 FGD6Q6ZV73 1430 aa11.77□□□□□ -0.53
RPS28P1-201ENST00000604589 HSPA2P54652 639 aa11.76□□□□□ -0.53
RPS28P1-201ENST00000604589 GGT6Q6P531 493 aa11.76□□□□□ -0.53
RPS28P1-201ENST00000604589 KDM5DQ9BY66 1539 aa11.76□□□□□ -0.53
RPS28P1-201ENST00000604589 DMRT2Q9Y5R5 561 aa11.75□□□□□ -0.53
RPS28P1-201ENST00000604589 PTPRKQ15262 1439 aa11.75□□□□□ -0.53
RPS28P1-201ENST00000604589 KIF3BO15066 747 aa11.74□□□□□ -0.53
RPS28P1-201ENST00000604589 PTPN23Q9H3S7 1636 aa11.74□□□□□ -0.53
RPS28P1-201ENST00000604589 EIF2AK4Q9P2K8 1649 aaKnown RBP11.74□□□□□ -0.53
RPS28P1-201ENST00000604589 ABCC5O15440 1437 aa11.73□□□□□ -0.53
RPS28P1-201ENST00000604589 DUOX2Q9NRD8 1548 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms