RNA–Protein interactions for RNA: ENST00000604203.1

TMEM56-RWDD3-201, Transcript of TMEM56-RWDD3 readthrough, humanhuman

TSL 3

Gene TMEM56-RWDD3, Length 680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3-201ENST00000604203 KRTAP3-2Q9BYR7 98 aa13.6□□□□□ -0.23
TMEM56-RWDD3-201ENST00000604203 ECM2O94769 699 aaPredicted RBP13.59□□□□□ -0.23
TMEM56-RWDD3-201ENST00000604203 NLRP6P59044 892 aa13.59□□□□□ -0.23
TMEM56-RWDD3-201ENST00000604203 ERBB3P21860 1342 aa13.59□□□□□ -0.23
TMEM56-RWDD3-201ENST00000604203 STK25O00506 426 aa13.57□□□□□ -0.24
TMEM56-RWDD3-201ENST00000604203 FBXO22Q8NEZ5 403 aa13.52□□□□□ -0.25
TMEM56-RWDD3-201ENST00000604203 VARS2Q5ST30 1063 aaKnown RBP13.5□□□□□ -0.25
TMEM56-RWDD3-201ENST00000604203 ZSWIM6Q9HCJ5 1215 aa13.5□□□□□ -0.25
TMEM56-RWDD3-201ENST00000604203 MFRPQ9BY79 579 aa13.49□□□□□ -0.25
TMEM56-RWDD3-201ENST00000604203 RGL2O15211 777 aa13.47□□□□□ -0.25
TMEM56-RWDD3-201ENST00000604203 PKD2Q13563 968 aa13.45□□□□□ -0.26
TMEM56-RWDD3-201ENST00000604203 GPR153Q6NV75 609 aa13.43□□□□□ -0.26
TMEM56-RWDD3-201ENST00000604203 ARSIQ5FYB1 569 aa13.41□□□□□ -0.26
TMEM56-RWDD3-201ENST00000604203 C2orf72A6NCS6 295 aa13.36□□□□□ -0.27
TMEM56-RWDD3-201ENST00000604203 KHSRPQ92945 711 aaKnown RBP eCLIP13.36□□□□□ -0.271e-7■■□□□ 13.1
TMEM56-RWDD3-201ENST00000604203 ZNF687Q8N1G0 1237 aa13.35□□□□□ -0.27
TMEM56-RWDD3-201ENST00000604203 KIF3CO14782 793 aa13.31□□□□□ -0.28
TMEM56-RWDD3-201ENST00000604203 TMC2Q8TDI7 906 aa13.31□□□□□ -0.28
TMEM56-RWDD3-201ENST00000604203 ZNF316A6NFI3 1004 aaPredicted RBP13.3□□□□□ -0.28
TMEM56-RWDD3-201ENST00000604203 RNF166Q96A37 237 aaPredicted RBP13.29□□□□□ -0.28
TMEM56-RWDD3-201ENST00000604203 NUDT7P0C024 238 aa13.26□□□□□ -0.29
TMEM56-RWDD3-201ENST00000604203 MYT1LQ9UL68 1186 aa13.26□□□□□ -0.29
TMEM56-RWDD3-201ENST00000604203 PPP1R37O75864 691 aa13.25□□□□□ -0.29
TMEM56-RWDD3-201ENST00000604203 ANKRD13DQ6ZTN6 518 aa13.23□□□□□ -0.29
TMEM56-RWDD3-201ENST00000604203 PCDHGA4Q9Y5G9 962 aa13.22□□□□□ -0.29
TMEM56-RWDD3-201ENST00000604203 SLC34A2O95436 690 aa13.18□□□□□ -0.3
TMEM56-RWDD3-201ENST00000604203 HS6ST3Q8IZP7 471 aa13.18□□□□□ -0.3
TMEM56-RWDD3-201ENST00000604203 LHX6Q9UPM6 363 aa13.18□□□□□ -0.3
TMEM56-RWDD3-201ENST00000604203 PTGER2P43116 358 aa13.17□□□□□ -0.3
TMEM56-RWDD3-201ENST00000604203 LSM11P83369 360 aaKnown RBP eCLIP13.17□□□□□ -0.3
TMEM56-RWDD3-201ENST00000604203 CHGAP10645 457 aaKnown RBP13.13□□□□□ -0.31
TMEM56-RWDD3-201ENST00000604203 PBX2P40425 430 aa13.12□□□□□ -0.31
TMEM56-RWDD3-201ENST00000604203 AXIN2Q9Y2T1 843 aa13.11□□□□□ -0.31
TMEM56-RWDD3-201ENST00000604203 PLPP6Q8IY26 295 aa13.07□□□□□ -0.32
TMEM56-RWDD3-201ENST00000604203 FOXK1P85037 733 aa13.05□□□□□ -0.32
TMEM56-RWDD3-201ENST00000604203 POTEEQ6S8J3 1075 aa13.05□□□□□ -0.32
TMEM56-RWDD3-201ENST00000604203 GPHNQ9NQX3 736 aaPredicted RBP13.04□□□□□ -0.32
TMEM56-RWDD3-201ENST00000604203 PSDA5PKW4 1024 aaPredicted RBP13.03□□□□□ -0.32
TMEM56-RWDD3-201ENST00000604203 PTCD2Q8WV60 388 aaKnown RBP13.03□□□□□ -0.32
TMEM56-RWDD3-201ENST00000604203 DSG2Q14126 1118 aa13.02□□□□□ -0.33
TMEM56-RWDD3-201ENST00000604203 ARHGAP33O14559 1287 aa12.99□□□□□ -0.33
TMEM56-RWDD3-201ENST00000604203 NKX1-1Q15270 411 aaPredicted RBP12.99□□□□□ -0.33
TMEM56-RWDD3-201ENST00000604203 TBC1D12O60347 775 aa12.98□□□□□ -0.33
TMEM56-RWDD3-201ENST00000604203 RYDENQ9NUL5 291 aaKnown RBP12.97□□□□□ -0.33
TMEM56-RWDD3-201ENST00000604203 KDM4FA0A1W2PPD8 638 aa12.96□□□□□ -0.33
TMEM56-RWDD3-201ENST00000604203 ADGRD1Q6QNK2 874 aa12.96□□□□□ -0.33
TMEM56-RWDD3-201ENST00000604203 PPP4R3BQ5MIZ7 849 aa12.95□□□□□ -0.34
TMEM56-RWDD3-201ENST00000604203 UPF1Q92900 1129 aaKnown RBP eCLIP12.93□□□□□ -0.34
TMEM56-RWDD3-201ENST00000604203 PSEN2P49810 448 aa12.92□□□□□ -0.34
TMEM56-RWDD3-201ENST00000604203 DNAJC5Q9H3Z4 198 aa12.92□□□□□ -0.34
TMEM56-RWDD3-201ENST00000604203 DMRTA1Q5VZB9 504 aa12.9□□□□□ -0.34
TMEM56-RWDD3-201ENST00000604203 KCNH8Q96L42 1107 aa12.88□□□□□ -0.35
TMEM56-RWDD3-201ENST00000604203 PPP1R15BQ5SWA1 713 aa12.87□□□□□ -0.35
TMEM56-RWDD3-201ENST00000604203 KCNK17Q96T54 332 aa12.87□□□□□ -0.35
TMEM56-RWDD3-201ENST00000604203 CRISPLD2Q9H0B8 497 aa12.87□□□□□ -0.35
TMEM56-RWDD3-201ENST00000604203 TK2O00142 265 aa12.86□□□□□ -0.35
TMEM56-RWDD3-201ENST00000604203 OXER1Q8TDS5 423 aa12.86□□□□□ -0.35
TMEM56-RWDD3-201ENST00000604203 HCSTQ9UBK5 93 aa12.85□□□□□ -0.35
TMEM56-RWDD3-201ENST00000604203 DCAF8L2P0C7V8 631 aa12.84□□□□□ -0.35
TMEM56-RWDD3-201ENST00000604203 STAC3Q96MF2 364 aa12.84□□□□□ -0.35
TMEM56-RWDD3-201ENST00000604203 ZNF454Q8N9F8 522 aa12.82□□□□□ -0.36
TMEM56-RWDD3-201ENST00000604203 HRO43593 1189 aa12.81□□□□□ -0.36
TMEM56-RWDD3-201ENST00000604203 NCKAP5LQ9HCH0 1330 aa12.81□□□□□ -0.36
TMEM56-RWDD3-201ENST00000604203 PDE4AP27815 886 aa12.8□□□□□ -0.36
TMEM56-RWDD3-201ENST00000604203 PLA2G2EQ9NZK7 142 aa12.8□□□□□ -0.36
TMEM56-RWDD3-201ENST00000604203 KCTD12Q96CX2 325 aaKnown RBP12.78□□□□□ -0.36
TMEM56-RWDD3-201ENST00000604203 GTPBP6O43824 516 aaPredicted RBP12.77□□□□□ -0.37
TMEM56-RWDD3-201ENST00000604203 SLC24A1O60721 1099 aa12.77□□□□□ -0.37
TMEM56-RWDD3-201ENST00000604203 LARP6Q9BRS8 491 aaKnown RBP12.75□□□□□ -0.37
TMEM56-RWDD3-201ENST00000604203 DDX27Q96GQ7 796 aaKnown RBP12.74□□□□□ -0.37
TMEM56-RWDD3-201ENST00000604203 BCL2L12Q9HB09 334 aa12.73□□□□□ -0.37
TMEM56-RWDD3-201ENST00000604203 FOSBP53539 338 aa12.72□□□□□ -0.37
TMEM56-RWDD3-201ENST00000604203 VPS9D1Q9Y2B5 631 aa12.72□□□□□ -0.37
TMEM56-RWDD3-201ENST00000604203 EVI5O60447 810 aa12.71□□□□□ -0.37
TMEM56-RWDD3-201ENST00000604203 PTPREP23469 700 aa12.7□□□□□ -0.38
TMEM56-RWDD3-201ENST00000604203 MAP3K9P80192 1104 aa12.68□□□□□ -0.38
TMEM56-RWDD3-201ENST00000604203 JPH4Q96JJ6 628 aa12.68□□□□□ -0.38
TMEM56-RWDD3-201ENST00000604203 PTPN5P54829 565 aa12.65□□□□□ -0.38
TMEM56-RWDD3-201ENST00000604203 AMER1Q5JTC6 1135 aaPredicted RBP12.65□□□□□ -0.38
TMEM56-RWDD3-201ENST00000604203 ZDHHC16Q969W1 377 aa12.65□□□□□ -0.38
TMEM56-RWDD3-201ENST00000604203 ANO8Q9HCE9 1232 aaPredicted RBP12.65□□□□□ -0.38
TMEM56-RWDD3-201ENST00000604203 MFSD10Q14728 455 aa12.64□□□□□ -0.39
TMEM56-RWDD3-201ENST00000604203 SLC4A5Q9BY07 1137 aa12.64□□□□□ -0.39
TMEM56-RWDD3-201ENST00000604203 GOLGA8CPA6NN73 597 aa12.63□□□□□ -0.39
TMEM56-RWDD3-201ENST00000604203 ADAM33Q9BZ11 813 aa12.63□□□□□ -0.39
TMEM56-RWDD3-201ENST00000604203 ZBED2Q9BTP6 218 aa12.62□□□□□ -0.39
TMEM56-RWDD3-201ENST00000604203 EMILIN3Q9NT22 766 aa12.61□□□□□ -0.39
TMEM56-RWDD3-201ENST00000604203 MRPL50Q8N5N7 158 aaKnown RBP12.6□□□□□ -0.39
TMEM56-RWDD3-201ENST00000604203 RTN4Q9NQC3 1192 aaKnown RBP12.59□□□□□ -0.39
TMEM56-RWDD3-201ENST00000604203 CADPS2Q86UW7 1296 aa12.58□□□□□ -0.4
TMEM56-RWDD3-201ENST00000604203 BHMG1C9JSJ3 638 aaPredicted RBP12.57□□□□□ -0.4
TMEM56-RWDD3-201ENST00000604203 WNT2BQ93097 391 aa12.57□□□□□ -0.4
TMEM56-RWDD3-201ENST00000604203 THSD4Q6ZMP0 1018 aa12.56□□□□□ -0.4
TMEM56-RWDD3-201ENST00000604203 NBPF3Q9H094 633 aa12.56□□□□□ -0.4
TMEM56-RWDD3-201ENST00000604203 PCDHGA10Q9Y5H3 936 aa12.54□□□□□ -0.4
TMEM56-RWDD3-201ENST00000604203 PPP1R3GB7ZBB8 358 aa12.52□□□□□ -0.41
TMEM56-RWDD3-201ENST00000604203 TYW1BQ6NUM6 668 aa12.5□□□□□ -0.41
TMEM56-RWDD3-201ENST00000604203 PROX2Q3B8N5 592 aa12.49□□□□□ -0.41
TMEM56-RWDD3-201ENST00000604203 FBXW7Q969H0 707 aa12.49□□□□□ -0.41
TMEM56-RWDD3-201ENST00000604203 PHF14O94880 888 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms