RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 PSEN1P49768 467 aa6.91□□□□□ -1.3
LINC01109-201ENST00000603837 FGD1P98174 961 aa6.91□□□□□ -1.3
LINC01109-201ENST00000603837 ZFP91Q96JP5 570 aaPredicted RBP6.91□□□□□ -1.3
LINC01109-201ENST00000603837 ARID3AQ99856 593 aa6.91□□□□□ -1.3
LINC01109-201ENST00000603837 STK25O00506 426 aa6.9□□□□□ -1.3
LINC01109-201ENST00000603837 TRPC6Q9Y210 931 aa6.9□□□□□ -1.3
LINC01109-201ENST00000603837 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.9□□□□□ -1.3
LINC01109-201ENST00000603837 STK24Q9Y6E0 443 aa6.88□□□□□ -1.31
LINC01109-201ENST00000603837 HS6ST3Q8IZP7 471 aa6.87□□□□□ -1.31
LINC01109-201ENST00000603837 TMEM106CQ9BVX2 250 aa6.87□□□□□ -1.31
LINC01109-201ENST00000603837 TIE1P35590 1138 aa6.87□□□□□ -1.31
LINC01109-201ENST00000603837 VSIG10Q8N0Z9 540 aa6.87□□□□□ -1.31
LINC01109-201ENST00000603837 DCBLD2Q96PD2 775 aa6.86□□□□□ -1.31
LINC01109-201ENST00000603837 TTLL13PA6NNM8 815 aa6.85□□□□□ -1.31
LINC01109-201ENST00000603837 TSHZ2Q9NRE2 1034 aa6.85□□□□□ -1.31
LINC01109-201ENST00000603837 BMP2KQ9NSY1 1161 aaPredicted RBP6.85□□□□□ -1.31
LINC01109-201ENST00000603837 CABP2Q9NPB3 220 aa6.84□□□□□ -1.31
LINC01109-201ENST00000603837 GOLGA2Q08379 1002 aa6.83□□□□□ -1.32
LINC01109-201ENST00000603837 ZNF428Q96B54 188 aa6.82□□□□□ -1.32
LINC01109-201ENST00000603837 SALL2Q9Y467 1007 aaPredicted RBP6.82□□□□□ -1.32
LINC01109-201ENST00000603837 DIEXFQ68CQ4 756 aaKnown RBP6.82□□□□□ -1.32
LINC01109-201ENST00000603837 BBXQ8WY36 941 aaPredicted RBP6.82□□□□□ -1.32
LINC01109-201ENST00000603837 ATMINO43313 823 aaPredicted RBP6.82□□□□□ -1.32
LINC01109-201ENST00000603837 ASTLQ6HA08 431 aaPredicted RBP6.82□□□□□ -1.32
LINC01109-201ENST00000603837 TRIM35Q9UPQ4 493 aa6.82□□□□□ -1.32
LINC01109-201ENST00000603837 ATN1P54259 1190 aaPredicted RBP6.81□□□□□ -1.32
LINC01109-201ENST00000603837 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.8□□□□□ -1.32
LINC01109-201ENST00000603837 EFCAB3Q8N7B9 438 aa6.8□□□□□ -1.32
LINC01109-201ENST00000603837 DNAJC5Q9H3Z4 198 aa6.8□□□□□ -1.32
LINC01109-201ENST00000603837 MKRN3Q13064 507 aaKnown RBP6.79□□□□□ -1.32
LINC01109-201ENST00000603837 BRPF3Q9ULD4 1205 aa6.79□□□□□ -1.32
LINC01109-201ENST00000603837 NKX1-1Q15270 411 aaPredicted RBP6.78□□□□□ -1.32
LINC01109-201ENST00000603837 POTEIP0CG38 1075 aa6.78□□□□□ -1.32
LINC01109-201ENST00000603837 YTHDC1Q96MU7 727 aaKnown RBP6.78□□□□□ -1.32
LINC01109-201ENST00000603837 NECTIN2Q92692 538 aa6.77□□□□□ -1.33
LINC01109-201ENST00000603837 ERICH6BQ5W0A0 696 aa6.77□□□□□ -1.33
LINC01109-201ENST00000603837 HSP90B1P14625 803 aaKnown RBP6.76□□□□□ -1.33
LINC01109-201ENST00000603837 SOX12O15370 315 aa6.76□□□□□ -1.33
LINC01109-201ENST00000603837 CLSPNQ9HAW4 1339 aa6.75□□□□□ -1.33
LINC01109-201ENST00000603837 MFRPQ9BY79 579 aa6.75□□□□□ -1.33
LINC01109-201ENST00000603837 SPRYD3Q8NCJ5 442 aa6.74□□□□□ -1.33
LINC01109-201ENST00000603837 MYT1LQ9UL68 1186 aa6.74□□□□□ -1.33
LINC01109-201ENST00000603837 EIF4G1Q04637 1599 aaKnown RBP6.74□□□□□ -1.33
LINC01109-201ENST00000603837 PHF8Q9UPP1 1060 aa6.74□□□□□ -1.33
LINC01109-201ENST00000603837 AAMPQ13685 434 aa6.73□□□□□ -1.33
LINC01109-201ENST00000603837 IER5LQ5T953 404 aa6.73□□□□□ -1.33
LINC01109-201ENST00000603837 RYDENQ9NUL5 291 aaKnown RBP6.73□□□□□ -1.33
LINC01109-201ENST00000603837 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.73□□□□□ -1.33
LINC01109-201ENST00000603837 NLRP6P59044 892 aa6.73□□□□□ -1.33
LINC01109-201ENST00000603837 SLC39A7Q92504 469 aa6.73□□□□□ -1.33
LINC01109-201ENST00000603837 SUPT16HQ9Y5B9 1047 aaKnown RBP6.73□□□□□ -1.33
LINC01109-201ENST00000603837 CC2D2AQ9P2K1 1620 aa6.73□□□□□ -1.33
LINC01109-201ENST00000603837 NAP1L5Q96NT1 182 aaPredicted RBP6.73□□□□□ -1.33
LINC01109-201ENST00000603837 CCDC9Q9Y3X0 531 aaKnown RBP6.73□□□□□ -1.33
LINC01109-201ENST00000603837 GTPBP6O43824 516 aaPredicted RBP6.72□□□□□ -1.33
LINC01109-201ENST00000603837 C7P10643 843 aa6.72□□□□□ -1.33
LINC01109-201ENST00000603837 TMED8Q6PL24 325 aaPredicted RBP6.72□□□□□ -1.33
LINC01109-201ENST00000603837 SEC24BO95487 1268 aa6.71□□□□□ -1.33
LINC01109-201ENST00000603837 CUX2O14529 1486 aa6.71□□□□□ -1.34
LINC01109-201ENST00000603837 PRDM10Q9NQV6 1147 aa6.71□□□□□ -1.34
LINC01109-201ENST00000603837 METRNQ9UJH8 293 aa6.71□□□□□ -1.34
LINC01109-201ENST00000603837 DEKP35659 375 aaKnown RBP6.7□□□□□ -1.34
LINC01109-201ENST00000603837 FBXO22Q8NEZ5 403 aa6.7□□□□□ -1.34
LINC01109-201ENST00000603837 IRX5P78411 483 aaPredicted RBP6.7□□□□□ -1.34
LINC01109-201ENST00000603837 OCEL1Q9H607 264 aa6.7□□□□□ -1.34
LINC01109-201ENST00000603837 SCRIBQ14160 1630 aa6.7□□□□□ -1.34
LINC01109-201ENST00000603837 PLCG2P16885 1265 aa6.69□□□□□ -1.34
LINC01109-201ENST00000603837 RSPH4AQ5TD94 716 aa6.69□□□□□ -1.34
LINC01109-201ENST00000603837 ZNF592Q92610 1267 aa6.69□□□□□ -1.34
LINC01109-201ENST00000603837 ILDR1Q86SU0 546 aaPredicted RBP6.68□□□□□ -1.34
LINC01109-201ENST00000603837 MS4A4AQ96JQ5 239 aa6.68□□□□□ -1.34
LINC01109-201ENST00000603837 COLQQ9Y215 455 aaPredicted RBP6.68□□□□□ -1.34
LINC01109-201ENST00000603837 PDCD7Q8N8D1 485 aaKnown RBP6.68□□□□□ -1.34
LINC01109-201ENST00000603837 SMARCA2P51531 1590 aa6.67□□□□□ -1.34
LINC01109-201ENST00000603837 RBM10P98175 930 aaKnown RBP6.67□□□□□ -1.34
LINC01109-201ENST00000603837 ZNF526Q8TF50 670 aaPredicted RBP6.67□□□□□ -1.34
LINC01109-201ENST00000603837 DPY19L2Q6NUT2 758 aa6.66□□□□□ -1.34
LINC01109-201ENST00000603837 PEG3Q9GZU2 1588 aa6.66□□□□□ -1.34
LINC01109-201ENST00000603837 HMGXB3Q12766 1538 aa6.66□□□□□ -1.34
LINC01109-201ENST00000603837 POTEFA5A3E0 1075 aa6.65□□□□□ -1.34
LINC01109-201ENST00000603837 C1orf115Q9H7X2 142 aa6.65□□□□□ -1.34
LINC01109-201ENST00000603837 PPP1R37O75864 691 aa6.65□□□□□ -1.34
LINC01109-201ENST00000603837 CWC22Q9HCG8 908 aaKnown RBP6.64□□□□□ -1.35
LINC01109-201ENST00000603837 ARID3CA6NKF2 412 aa6.64□□□□□ -1.35
LINC01109-201ENST00000603837 RSPH6AQ9H0K4 717 aa6.64□□□□□ -1.35
LINC01109-201ENST00000603837 NBR1Q14596 966 aa6.63□□□□□ -1.35
LINC01109-201ENST00000603837 BCCIPQ9P287 314 aaKnown RBP eCLIP6.63□□□□□ -1.35
LINC01109-201ENST00000603837 RBM19Q9Y4C8 960 aaKnown RBP6.63□□□□□ -1.35
LINC01109-201ENST00000603837 CECR2Q9BXF3 1484 aa6.63□□□□□ -1.35
LINC01109-201ENST00000603837 FOXD4L5Q5VV16 416 aaPredicted RBP6.63□□□□□ -1.35
LINC01109-201ENST00000603837 FOXD4L4Q8WXT5 416 aaPredicted RBP6.63□□□□□ -1.35
LINC01109-201ENST00000603837 PUS7Q96PZ0 661 aaKnown RBP6.63□□□□□ -1.35
LINC01109-201ENST00000603837 G3V3G9 751 aa6.62□□□□□ -1.35
LINC01109-201ENST00000603837 L3MBTL3Q96JM7 780 aaPredicted RBP6.61□□□□□ -1.35
LINC01109-201ENST00000603837 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.61□□□□□ -1.35
LINC01109-201ENST00000603837 BOLA1Q9Y3E2 137 aa6.61□□□□□ -1.35
LINC01109-201ENST00000603837 CNPY4Q8N129 248 aa6.6□□□□□ -1.35
LINC01109-201ENST00000603837 HMGB1P09429 215 aaKnown RBP6.59□□□□□ -1.35
LINC01109-201ENST00000603837 MICALL2Q8IY33 904 aa6.59□□□□□ -1.35
LINC01109-201ENST00000603837 NCAPD3P42695 1498 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms